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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 7
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX69484 Canola plasma membrane 97.33 97.79
Bra008659.1-P Field mustard plasma membrane 96.86 97.32
AT5G16000.1 Thale cress plasma membrane 90.89 90.75
CDX70667 Canola endoplasmic reticulum, golgi 89.48 79.17
CDX78667 Canola golgi, plasma membrane 89.64 78.98
VIT_14s0083g00620.t01 Wine grape plasma membrane 76.92 78.78
KRH45170 Soybean plasma membrane 76.92 78.65
KRH01456 Soybean plasma membrane 76.61 78.33
KRG93765 Soybean plasma membrane 75.2 76.76
KRH18305 Soybean plasma membrane 74.57 76.12
Solyc02g089550.2.1 Tomato plasma membrane 74.25 75.56
GSMUA_Achr3P28140_001 Banana plasma membrane 70.33 72.85
Zm00001d018347_P001 Maize cytosol 9.11 72.5
TraesCS6A01G289500.1 Wheat plasma membrane 70.17 71.63
TraesCS6D01G269400.1 Wheat plasma membrane 70.33 71.57
TraesCS6B01G319700.1 Wheat plasma membrane 70.17 71.52
PGSC0003DMT400026062 Potato plasma membrane 73.94 70.93
EES05592 Sorghum plasma membrane 68.45 69.65
EER88222 Sorghum plasma membrane 68.76 69.63
CDX83534 Canola plasma membrane 69.54 69.22
Zm00001d017913_P001 Maize plasma membrane 68.13 69.11
GSMUA_Achr9P19160_001 Banana plasma membrane 67.5 69.02
TraesCS7D01G212800.1 Wheat plasma membrane 67.66 68.96
TraesCS7A01G211100.1 Wheat plasma membrane 67.5 68.8
CDY48073 Canola plasma membrane 69.07 68.75
TraesCS7B01G118100.1 Wheat plasma membrane 67.35 68.64
HORVU7Hr1G043030.2 Barley plasma membrane 67.03 68.32
Zm00001d037297_P002 Maize plasma membrane 68.6 66.41
CDY28194 Canola cytosol 31.71 65.58
GSMUA_Achr9P14620_001 Banana plasma membrane 72.06 65.48
GSMUA_Achr1P16110_001 Banana plasma membrane 68.6 64.93
HORVU6Hr1G072620.29 Barley plasma membrane 70.17 64.78
GSMUA_Achr3P06260_001 Banana plasma membrane 69.86 64.77
Os06t0274500-01 Rice extracellular 64.84 64.53
GSMUA_Achr1P09620_001 Banana plasma membrane 70.8 64.34
CDX72249 Canola plasma membrane 60.28 60.28
CDY65182 Canola plasma membrane 60.13 60.13
GSMUA_Achr7P06010_001 Banana plasma membrane 68.13 60.03
CDY39685 Canola plasma membrane 59.97 59.97
CDY61508 Canola cytosol 47.1 59.17
CDY44608 Canola cytosol 46.94 58.97
Zm00001d045728_P003 Maize plasma membrane 67.35 58.93
CDY46185 Canola golgi, plasma membrane 58.24 58.33
CDY39211 Canola plasma membrane 52.9 58.2
CDY61461 Canola golgi, plasma membrane 57.93 58.11
Os02t0728500-01 Rice extracellular, plasma membrane 29.51 58.02
CDX68670 Canola plasma membrane 52.59 55.83
CDY00320 Canola endoplasmic reticulum 1.41 52.94
CDY36679 Canola plasma membrane 51.18 52.5
CDX96350 Canola plasma membrane 51.33 52.32
CDX72833 Canola plasma membrane 51.33 52.32
CDY39449 Canola plasma membrane 50.24 52.03
CDX77614 Canola plasma membrane 50.08 51.95
CDY46116 Canola plasma membrane 48.51 51.24
CDX72403 Canola plasma membrane 48.51 51.24
CDX75351 Canola plasma membrane 49.45 51.14
CDY45042 Canola plasma membrane 48.98 50.98
CDX68975 Canola plasma membrane 48.98 50.73
CDX89615 Canola plasma membrane 47.72 49.84
CDX93126 Canola plasma membrane 47.41 49.51
CDY48450 Canola plasma membrane 47.41 49.35
CDY40089 Canola plasma membrane 46.31 48.28
CDX85768 Canola plasma membrane 46.15 48.12
CDX71165 Canola plasma membrane 46.47 47.9
CDY08807 Canola plasma membrane 45.53 47.7
CDY55159 Canola extracellular, plasma membrane, vacuole 45.53 47.7
CDY39690 Canola cytosol 44.9 47.12
CDX68299 Canola plasma membrane 50.55 45.42
CDY41531 Canola cytosol 40.66 44.73
CDX84436 Canola cytosol 40.66 44.73
CDY28301 Canola plasma membrane 27.47 44.08
CDY52435 Canola plasma membrane, vacuole 20.09 36.47
CDX88452 Canola plasma membrane, vacuole 19.78 35.9
CDY00321 Canola plasma membrane 31.4 34.25
CDX84346 Canola plasma membrane 31.24 34.08
CDY67608 Canola cytosol, mitochondrion, nucleus 4.24 33.75
CDX68667 Canola cytosol, mitochondrion, nucleus 4.24 33.75
CDY16762 Canola plasma membrane 30.46 32.23
CDX84187 Canola plasma membrane 29.67 32.09
CDY31708 Canola plasma membrane 29.36 31.86
CDY32113 Canola plasma membrane 29.36 31.8
CDX87267 Canola plasma membrane 29.98 31.78
CDY40456 Canola plasma membrane 29.36 31.32
CDX79610 Canola plasma membrane 28.89 30.98
CDX84610 Canola plasma membrane 28.89 30.98
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078GMC7UniProt:A0A078GMC7
EnsemblPlants:CDY26481ProteinID:CDY26481ProteinID:CDY26481.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00035287001
InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sf
InterPro:Leu-rich_rptPFAM:PF00069PFAM:PF00560PFAM:PF08263ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF220InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EF472C
SEG:seg:::::
Description
BnaC09g41870DBnaC09g41870D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GMC7]
Coordinates
chrLK032190:+:372040..374883
Molecular Weight (calculated)
70584.5 Da
IEP (calculated)
7.756
GRAVY (calculated)
-0.081
Length
637 amino acids
Sequence
(BLAST)
001: MMMTMMMRRS LVYFLGFSCL LCSVSGLLSS KGVNFEVQAL MDIKASLHDP HGVLDNWDRD AVDPCSWTMV TCSSENFVIG LGTPSQNLSG TLSPSITNLT
101: NLRIVLLQNN YITGKIPSEI GRLTRLETLD LSDNFFHGEI PFSVGNLRSL QYLRLNNNSL SGVIPLSLSN MTQLVLLDLS YNNLSSPVPR FAAKTFSIVG
201: NPLICPTGKE PDCNGTTLIP MSMNLNETRA PLYVGRSKNH KMAIAVGSSV GIVSLIFIVV GLFLWWRQRH NQNTFFDVKD GHHHHEEVSL GNLRRFGFRE
301: LQIATNNFSS KNLLGKGGYG NVYKGTLTDN TVVAVKRLKD GNALGGEIQF QTEVEMISLA VHRNLLRLYG FCITQAEKLL VYPYMSNGSV ASRMKAKPVL
401: DWSVRKKIAI GAARGLVYLH EQCDPKIIHR DVKAANILLD DYCEAVVGDF GLAKLLDHQD THVTTAVRGT VGHIAPEYLS TGQSSEKTDV FGFGILLLEL
501: VTGLRALEFG KAANQKGAML EWVKKIHLEK KLEVLVDKEL LKDKKSFDEI ELEEMVRVAL LCTQYLPGHR PKMSEVVRML EGDGLAERWE ASQGRSESGS
601: KCSNGRVNEL MSSSDRYSEL TDDSTLLAQA MELSGPR
Best Arabidopsis Sequence Match ( AT5G16000.1 )
(BLAST)
001: MESTIVMMMM ITRSFFCFLG FLCLLCSSVH GLLSPKGVNF EVQALMDIKA SLHDPHGVLD NWDRDAVDPC SWTMVTCSSE NFVIGLGTPS QNLSGTLSPS
101: ITNLTNLRIV LLQNNNIKGK IPAEIGRLTR LETLDLSDNF FHGEIPFSVG YLQSLQYLRL NNNSLSGVFP LSLSNMTQLA FLDLSYNNLS GPVPRFAAKT
201: FSIVGNPLIC PTGTEPDCNG TTLIPMSMNL NQTGVPLYAG GSRNHKMAIA VGSSVGTVSL IFIAVGLFLW WRQRHNQNTF FDVKDGNHHE EVSLGNLRRF
301: GFRELQIATN NFSSKNLLGK GGYGNVYKGI LGDSTVVAVK RLKDGGALGG EIQFQTEVEM ISLAVHRNLL RLYGFCITQT EKLLVYPYMS NGSVASRMKA
401: KPVLDWSIRK RIAIGAARGL VYLHEQCDPK IIHRDVKAAN ILLDDYCEAV VGDFGLAKLL DHQDSHVTTA VRGTVGHIAP EYLSTGQSSE KTDVFGFGIL
501: LLELVTGQRA FEFGKAANQK GVMLDWVKKI HQEKKLELLV DKELLKKKSY DEIELDEMVR VALLCTQYLP GHRPKMSEVV RMLEGDGLAE KWEASQRSDS
601: VSKCSNRINE LMSSSDRYSD LTDDSSLLVQ AMELSGPR
Arabidopsis Description
NIK1Protein NSP-INTERACTING KINASE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFS4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.