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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra032133.1-P Field mustard plasma membrane 98.74 98.74
CDY39685 Canola plasma membrane 98.27 98.27
AT2G23950.1 Thale cress plasma membrane 89.17 89.59
CDX72249 Canola plasma membrane 81.32 81.32
CDY39211 Canola plasma membrane 73.0 80.31
CDY28194 Canola cytosol 36.58 75.65
CDX68670 Canola plasma membrane 69.54 73.83
VIT_11s0037g00960.t01 Wine grape plasma membrane 71.74 71.41
KRH72362 Soybean plasma membrane 71.43 71.32
KRH02989 Soybean plasma membrane 71.74 70.96
PGSC0003DMT400028991 Potato plasma membrane 66.72 67.35
Solyc07g006110.2.1 Tomato plasma membrane 66.72 67.35
GSMUA_Achr9P13420_001 Banana golgi, plasma membrane, vacuole 62.32 61.55
CDX69484 Canola plasma membrane 59.97 60.25
GSMUA_Achr3P04810_001 Banana plasma membrane 61.07 60.22
CDY26481 Canola plasma membrane 60.13 60.13
TraesCS7D01G416400.1 Wheat plasma membrane 60.13 59.1
TraesCS7A01G425500.1 Wheat plasma membrane 60.28 58.81
TraesCS7B01G324500.1 Wheat plasma membrane 59.5 58.67
Os08t0442700-01 Rice plasma membrane 61.85 58.11
CDX83534 Canola plasma membrane 58.24 57.97
CDY48073 Canola plasma membrane 57.93 57.66
CDY46185 Canola golgi, plasma membrane 56.2 56.29
CDY67608 Canola cytosol, mitochondrion, nucleus 7.06 56.25
CDX68667 Canola cytosol, mitochondrion, nucleus 7.06 56.25
CDY61508 Canola cytosol 44.74 56.21
CDY44608 Canola cytosol 44.58 56.02
CDY61461 Canola golgi, plasma membrane 55.73 55.91
HORVU7Hr1G097930.4 Barley plasma membrane, plastid 59.81 53.74
KXG25244 Sorghum plastid 61.85 53.46
CDX70667 Canola endoplasmic reticulum, golgi 59.03 52.22
CDX78667 Canola golgi, plasma membrane 59.03 52.01
CDX77614 Canola plasma membrane 48.04 49.84
CDY39449 Canola plasma membrane 48.04 49.76
CDY36679 Canola plasma membrane 47.57 48.79
CDX96350 Canola plasma membrane 47.57 48.48
CDX72833 Canola plasma membrane 47.41 48.32
CDY46116 Canola plasma membrane 45.68 48.26
CDX72403 Canola plasma membrane 45.53 48.09
CDY45042 Canola plasma membrane 46.15 48.04
CDX68975 Canola plasma membrane 46.0 47.64
CDX75351 Canola plasma membrane 46.0 47.56
CDY48450 Canola plasma membrane 45.68 47.55
Zm00001d032142_P004 Maize plasma membrane 61.85 47.3
CDX89615 Canola plasma membrane 44.74 46.72
CDX93126 Canola plasma membrane 44.58 46.56
CDX71165 Canola plasma membrane 45.05 46.44
CDY55159 Canola extracellular, plasma membrane, vacuole 42.86 44.9
CDY08807 Canola plasma membrane 42.86 44.9
CDY40089 Canola plasma membrane 42.86 44.68
CDX84436 Canola cytosol 40.5 44.56
CDX85768 Canola plasma membrane 42.7 44.52
CDY39690 Canola cytosol 42.39 44.48
CDY41531 Canola cytosol 39.87 43.87
CDX68299 Canola plasma membrane 46.78 42.03
CDY00320 Canola endoplasmic reticulum 1.1 41.18
CDY28301 Canola plasma membrane 24.96 40.05
CDX88452 Canola plasma membrane, vacuole 20.09 36.47
CDY52435 Canola plasma membrane, vacuole 20.09 36.47
CDY00321 Canola plasma membrane 29.83 32.53
CDX84346 Canola plasma membrane 29.83 32.53
CDX84187 Canola plasma membrane 28.89 31.24
CDY31708 Canola plasma membrane 28.73 31.18
CDY32113 Canola plasma membrane 28.57 30.95
CDY16762 Canola plasma membrane 29.2 30.9
CDY40456 Canola plasma membrane 28.89 30.82
CDX84610 Canola plasma membrane 28.57 30.64
CDX79610 Canola plasma membrane 28.57 30.64
CDX87267 Canola plasma membrane 28.73 30.45
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078JIG9UniProt:A0A078JIG9
EnsemblPlants:CDY65182ProteinID:CDY65182ProteinID:CDY65182.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00045340001
InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sf
InterPro:Leu-rich_rptPFAM:PF07714PFAM:PF08263PRINTS:PR00019ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PFscan:PS51450PANTHER:PTHR27001PANTHER:PTHR27001:SF144InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BS
SMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0004EB2CBFSEG:seg:::
Description
BnaC04g56200DBnaC04g56200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JIG9]
Coordinates
chrLK034682:+:5476..9067
Molecular Weight (calculated)
70021.2 Da
IEP (calculated)
7.638
GRAVY (calculated)
-0.075
Length
637 amino acids
Sequence
(BLAST)
001: MAVMKKDPYF LVSFVSFLLL CFSTCSLSSQ PRNPEVEALI NIKNELHDPH GVLNNWDEFS VDPCSWTMIT CSSDNLVTIL GVPSQSLSGT LSASISNLTN
101: LHQVLLQNNN ISGNIPRELC SLPKLQTLDL SNNRFSGEIP GSVNQLTSLL YLRLNNNSLS GPFPASLSQI PHLSFLDLSY NNLRGPVPKF PVKTINIAGN
201: PLICRSSPPE ICSGSINPSP FSVSLSSSSG RKTNVLAVAL GVSLAFAVTV ILSLAFIWYR KKQRRLMILR ISDKQEEGLL GLGNLKSFSF RELHAATDGF
301: SSKHILGAGG FGNVYRGKLG DGTMVAVKRL KDVNGASGNS QFRTELEMIS LAVHRNLLRL IGYCVSSSER LLVYPYMSNG SVASRLKAKP ALDWNTRKKI
401: AIGAARGLFY LHEQCDPKII HRDVKAANVL LDEFFEAVVG DFGLAKLLNH EDSHVTTAVR GTVGHIAPEY LSTGQSSEKT DVFGFGILLL ELITGMRALE
501: FGKTVSQKGA MLEWVKKLHK EMKVEELVDR ELGTTYDRIE VGEMLQVALL CTQFLPAHRP KMSEVVQMLE GDGLAERWAA SHNHSHFYHA NMSYRSITST
601: DVNGDNQTKH LFGSSGFDDE DDNHALDSFA MELSGPR
Best Arabidopsis Sequence Match ( AT2G23950.1 )
(BLAST)
001: MVVMKLITMK IFSVLLLLCF FVTCSLSSEP RNPEVEALIN IKNELHDPHG VFKNWDEFSV DPCSWTMISC SSDNLVIGLG APSQSLSGTL SGSIGNLTNL
101: RQVSLQNNNI SGKIPPEICS LPKLQTLDLS NNRFSGEIPG SVNQLSNLQY LRLNNNSLSG PFPASLSQIP HLSFLDLSYN NLRGPVPKFP ARTFNVAGNP
201: LICKNSLPEI CSGSISASPL SVSLRSSSGR RTNILAVALG VSLGFAVSVI LSLGFIWYRK KQRRLTMLRI SDKQEEGLLG LGNLRSFTFR ELHVATDGFS
301: SKSILGAGGF GNVYRGKFGD GTVVAVKRLK DVNGTSGNSQ FRTELEMISL AVHRNLLRLI GYCASSSERL LVYPYMSNGS VASRLKAKPA LDWNTRKKIA
401: IGAARGLFYL HEQCDPKIIH RDVKAANILL DEYFEAVVGD FGLAKLLNHE DSHVTTAVRG TVGHIAPEYL STGQSSEKTD VFGFGILLLE LITGMRALEF
501: GKSVSQKGAM LEWVRKLHKE MKVEELVDRE LGTTYDRIEV GEMLQVALLC TQFLPAHRPK MSEVVQMLEG DGLAERWAAS HDHSHFYHAN MSYRTITSTD
601: GNNQTKHLFG SSGFEDEDDN QALDSFAMEL SGPR
Arabidopsis Description
Probable LRR receptor-like serine/threonine-protein kinase At2g23950 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVM4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.