Factsheet for PGSC0003DMT400028991

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 10
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g006110.2.1	Tomato	plasma membrane	97.94	97.94
VIT_11s0037g00960.t01	Wine grape	plasma membrane	75.59	74.53
KRH72362	Soybean	plasma membrane	71.63	70.85
KRH02989	Soybean	plasma membrane	71.47	70.03
CDX72249	Canola	plasma membrane	69.57	68.92
Bra024069.1-P	Field mustard	plasma membrane	69.41	68.87
CDY28194	Canola	cytosol	33.44	68.51
AT4G30520.1	Thale cress	plasma membrane	70.05	68.21
AT2G23950.1	Thale cress	plasma membrane	67.83	67.51
CDY39211	Canola	plasma membrane	61.33	66.84
CDY65182	Canola	plasma membrane	67.35	66.72
Bra032133.1-P	Field mustard	plasma membrane	67.04	66.41
CDY39685	Canola	plasma membrane	66.88	66.25
GSMUA_Achr9P13420_001	Banana	golgi, plasma membrane, vacuole	64.18	62.79
PGSC0003DMT400007454	Potato	plasma membrane	60.06	61.13
CDX68670	Canola	plasma membrane	57.84	60.83
GSMUA_Achr3P04810_001	Banana	plasma membrane	61.97	60.53
PGSC0003DMT400019446	Potato	plasma membrane	59.11	60.06
TraesCS7A01G425500.1	Wheat	plasma membrane	61.17	59.11
TraesCS7D01G416400.1	Wheat	plasma membrane	60.54	58.95
Os08t0442700-01	Rice	plasma membrane	63.23	58.85
TraesCS7B01G324500.1	Wheat	plasma membrane	60.06	58.67
PGSC0003DMT400019924	Potato	cytosol	56.1	58.32
PGSC0003DMT400026062	Potato	plasma membrane	61.33	58.28
PGSC0003DMT400035086	Potato	plasma membrane	52.61	55.33
HORVU7Hr1G097930.4	Barley	plasma membrane, plastid	60.38	53.74
KXG25244	Sorghum	plastid	61.81	52.92
Bra011200.1-P	Field mustard	plastid	44.85	52.8
PGSC0003DMT400032797	Potato	cytosol, plasma membrane, plastid	42.95	52.32
PGSC0003DMT400045607	Potato	cytosol, plasma membrane, plastid	42.95	51.62
PGSC0003DMT400073093	Potato	plasma membrane	48.65	49.12
PGSC0003DMT400041690	Potato	plasma membrane	45.32	47.35
Zm00001d032142_P004	Maize	plasma membrane	62.28	47.18
PGSC0003DMT400070819	Potato	plasma membrane	46.75	46.53
PGSC0003DMT400056093	Potato	plasma membrane	44.53	46.52
PGSC0003DMT400059959	Potato	plasma membrane	42.47	43.51
CDY67608	Canola	cytosol, mitochondrion, nucleus	5.23	41.25
CDX68667	Canola	cytosol, mitochondrion, nucleus	5.23	41.25
CDY00320	Canola	endoplasmic reticulum	1.11	41.18
PGSC0003DMT400018244	Potato	plasma membrane	18.86	33.9
PGSC0003DMT400065173	Potato	plasma membrane	32.17	33.78

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102584901	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M1AS12	PFAM:PF00069	PFAM:PF08263	EnsemblPlantsGene:PGSC0003DMG400011160
PGSC:PGSC0003DMG400011160	EnsemblPlants:PGSC0003DMT400028991	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51450
PANTHER:PTHR27001	PANTHER:PTHR27001:SF144	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000295E60D	RefSeq:XP_006343723.1
SEG:seg	:	:	:	:	:

Description

Serine/threonine protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400011160]

Coordinates

chr7:+:1481012..1486170

Molecular Weight (calculated)

69710.9 Da

IEP (calculated)

7.136

GRAVY (calculated)

-0.090

Length

631 amino acids

Sequence
(BLAST)

001: MASIFLIFVL SLLLFYPFLC FSYEARNHEV EALIAIRRSL DDPKRALSNW DEDSVDPCSW AMISCSSENL VIALGAPSQG LSGVLSGMIS NLTNLKQVLL
101: QNNNISGHIP RELGKLPNLE TLDLSNNHFS GHVPDSLGLL NSLQYLRLNN NSLSGAIPLS LARVPQLAFL DLSFNNLSGP IPKFPTRTFN VVGNPLICGN
201: HSAETCFGSV NLMPLSFDID STGKRNSKRL AIAIGLSVSF ISLFLLGFGF IIWKRNQNRK QSILNINDMQ EEDLVRLGNL RSFTFKELQR ATNSFSSKNI
301: LGAGGFGNVY RGKLGDGSLV AVKRLKDISG TAGESQFRTE LELISLAVHR NLLRLIGYCA TPNERLLVYP FMSNGSVASR LRGKPALDWN TRKRIAIGTA
401: RGLLYLHEQC DPKIIHRDVK AANVLLDDFC EAVVGDFGLA KLLDHADSHV TTAVRGTVGH IAPEYLSTGQ SSEKTDVFGF GILLLELITG MRALELGKTV
501: NQKGAVLEWV KKMQHEKNVE ALIDRELGSN YDRIDVGEML QVAILCTQYL PSHRPKMSEV VRMLEGDGLA EKWAASHNYD GFSLTKNSNK TQTKHSMVPL
601: GYDDNDHDHL TVFGMMDDDY DTHAMELSGP R

Best Arabidopsis Sequence Match ( AT2G23950.1 )
(BLAST)

001: MVVMKLITMK IFSVLLLLCF FVTCSLSSEP RNPEVEALIN IKNELHDPHG VFKNWDEFSV DPCSWTMISC SSDNLVIGLG APSQSLSGTL SGSIGNLTNL
101: RQVSLQNNNI SGKIPPEICS LPKLQTLDLS NNRFSGEIPG SVNQLSNLQY LRLNNNSLSG PFPASLSQIP HLSFLDLSYN NLRGPVPKFP ARTFNVAGNP
201: LICKNSLPEI CSGSISASPL SVSLRSSSGR RTNILAVALG VSLGFAVSVI LSLGFIWYRK KQRRLTMLRI SDKQEEGLLG LGNLRSFTFR ELHVATDGFS
301: SKSILGAGGF GNVYRGKFGD GTVVAVKRLK DVNGTSGNSQ FRTELEMISL AVHRNLLRLI GYCASSSERL LVYPYMSNGS VASRLKAKPA LDWNTRKKIA
401: IGAARGLFYL HEQCDPKIIH RDVKAANILL DEYFEAVVGD FGLAKLLNHE DSHVTTAVRG TVGHIAPEYL STGQSSEKTD VFGFGILLLE LITGMRALEF
501: GKSVSQKGAM LEWVRKLHKE MKVEELVDRE LGTTYDRIEV GEMLQVALLC TQFLPAHRPK MSEVVQMLEG DGLAERWAAS HDHSHFYHAN MSYRTITSTD
601: GNNQTKHLFG SSGFEDEDDN QALDSFAMEL SGPR

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At2g23950 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVM4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.