Factsheet for PGSC0003DMT400035086

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 8
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g005140.2.1	Tomato	plasma membrane	95.17	94.69
PGSC0003DMT400019924	Potato	cytosol	81.67	80.72
VIT_01s0127g00230.t01	Wine grape	plasma membrane	78.33	75.08
KRH69595	Soybean	plasma membrane	76.17	73.24
KRH74566	Soybean	plasma membrane	76.0	73.19
HORVU4Hr1G029640.2	Barley	cytosol	29.17	70.28
HORVU6Hr1G074570.6	Barley	cytosol	41.67	69.44
GSMUA_Achr6P08840_001	Banana	plasma membrane	69.83	69.03
Bra031479.1-P	Field mustard	endoplasmic reticulum, plasma membrane	62.33	68.75
AT1G60800.1	Thale cress	plasma membrane	71.0	67.41
CDY46185	Canola	golgi, plasma membrane	71.33	67.3
CDY61461	Canola	golgi, plasma membrane	71.0	67.09
GSMUA_Achr2P23200_001	Banana	plasma membrane	70.83	67.03
EES02381	Sorghum	golgi, plasma membrane, vacuole	70.17	66.4
Os01t0171000-01	Rice	plasma membrane	69.33	66.24
CDY61508	Canola	cytosol	55.5	65.68
CDY44608	Canola	cytosol	55.33	65.48
TraesCS3B01G106100.1	Wheat	plasma membrane	68.67	65.19
HORVU3Hr1G016240.5	Barley	plasma membrane	68.5	64.83
TraesCS3D01G091000.2	Wheat	plasma membrane	68.5	64.83
Zm00001d008724_P007	Maize	plasma membrane	67.67	64.44
Zm00001d039678_P002	Maize	plasma membrane	69.17	62.69
PGSC0003DMT400007454	Potato	plasma membrane	64.33	62.26
HORVU6Hr1G093140.1	Barley	mitochondrion, plastid	27.83	61.17
HORVU7Hr1G083870.7	Barley	cytosol	20.67	60.49
PGSC0003DMT400019446	Potato	plasma membrane	61.5	59.42
TraesCS3A01G091100.1	Wheat	plasma membrane	60.83	56.68
PGSC0003DMT400026062	Potato	plasma membrane	61.83	55.87
PGSC0003DMT400073093	Potato	plasma membrane	54.83	52.64
PGSC0003DMT400028991	Potato	plasma membrane	55.33	52.61
PGSC0003DMT400032797	Potato	cytosol, plasma membrane, plastid	45.17	52.32
PGSC0003DMT400045607	Potato	cytosol, plasma membrane, plastid	45.0	51.43
PGSC0003DMT400070819	Potato	plasma membrane	51.83	49.05
PGSC0003DMT400056093	Potato	plasma membrane	46.0	45.7
PGSC0003DMT400041690	Potato	plasma membrane	45.5	45.2
PGSC0003DMT400059959	Potato	plasma membrane	46.0	44.81
PGSC0003DMT400018244	Potato	plasma membrane	20.67	35.33
PGSC0003DMT400065173	Potato	plasma membrane	31.5	31.45

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102584311	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M1B1S7	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855
EnsemblPlantsGene:PGSC0003DMG400013489	PGSC:PGSC0003DMG400013489	EnsemblPlants:PGSC0003DMT400035086	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF49	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000296C484	RefSeq:XP_006356418.1
RefSeq:XP_006356419.1	RefSeq:XP_006356420.1	RefSeq:XP_015168320.1	SEG:seg	:	:

Description

Leucine-rich repeat receptor-like kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400013489]

Coordinates

chr5:+:9131587..9137722

Molecular Weight (calculated)

66662.9 Da

IEP (calculated)

6.558

GRAVY (calculated)

-0.141

Length

600 amino acids

Sequence
(BLAST)

001: MLYLFWNVGL LLFCTLMESS SATLSPAGVN YEVVALTEIK KALHDPYNVL DNWDVNSVDP CSWRMVTCSL DGYVSALALP SQSLAGTLSP GIGNLTNLQY
101: VLLQNNAISG HIPDVIGKLQ KLQTLDLSNN KFEGEIPTSF EDLKNLNYLD VSYNNLSGTL PKISARAFKV LGNPLICGQG SENNCSAVYP EPLSFPPDSL
201: ADQSGAARKS RRVVVAFVAS FGAAFLVIVA LALLLWWRYR NNQQIFFDVN DHCYPEVCLG HLKRYTLKEL RTATDHFSSK RILGKGGFGV VYKASLNNGT
301: VVAVKRLNDY NAVGGENQFQ TEVELISLAV HRNLLHLLGF CSTESERLLV YPYMPNGSVA SRLKDSINGK PVLDWSRRKK IAQGTARGLV YLHEQCDPKI
401: IHRDVKAANI LLDEEFEAVV GDFGLAKLLD HHDSHVTTAV RGTIGHIAPE YLSTGQSSEK TDVFGFGILL LELITGQKAM DFGRGANQKG VVMLDWVRNL
501: HQEEKLNLMV DSNLKNNFDQ IELEEMVKVA LLCTHFNPSH RPKMSEALRM LEGDGLAEKW EASQKLETPR NRAFEHTPQR YSNFVEDSSL VEPMELSGPR

Best Arabidopsis Sequence Match ( AT1G60800.1 )
(BLAST)

001: MEGVRFVVWR LGFLVFVWFF DISSATLSPT GVNYEVTALV AVKNELNDPY KVLENWDVNS VDPCSWRMVS CTDGYVSSLD LPSQSLSGTL SPRIGNLTYL
101: QSVVLQNNAI TGPIPETIGR LEKLQSLDLS NNSFTGEIPA SLGELKNLNY LRLNNNSLIG TCPESLSKIE GLTLVDISYN NLSGSLPKVS ARTFKVIGNA
201: LICGPKAVSN CSAVPEPLTL PQDGPDESGT RTNGHHVALA FAASFSAAFF VFFTSGMFLW WRYRRNKQIF FDVNEQYDPE VSLGHLKRYT FKELRSATNH
301: FNSKNILGRG GYGIVYKGHL NDGTLVAVKR LKDCNIAGGE VQFQTEVETI SLALHRNLLR LRGFCSSNQE RILVYPYMPN GSVASRLKDN IRGEPALDWS
401: RRKKIAVGTA RGLVYLHEQC DPKIIHRDVK AANILLDEDF EAVVGDFGLA KLLDHRDSHV TTAVRGTVGH IAPEYLSTGQ SSEKTDVFGF GILLLELITG
501: QKALDFGRSA HQKGVMLDWV KKLHQEGKLK QLIDKDLNDK FDRVELEEIV QVALLCTQFN PSHRPKMSEV MKMLEGDGLA ERWEATQNGT GEHQPPPLPP
601: GMVSSSPRVR YYSDYIQESS LVVEAIELSG PR

Arabidopsis Description

NIK3Protein NSP-INTERACTING KINASE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.