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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY44608 Canola cytosol 99.8 99.8
CDY61461 Canola golgi, plasma membrane 92.7 74.02
CDY46185 Canola golgi, plasma membrane 92.31 73.58
AT1G60800.1 Thale cress plasma membrane 89.15 71.52
HORVU6Hr1G074570.6 Barley cytosol 49.7 70.0
HORVU4Hr1G029640.2 Barley cytosol 34.32 69.88
HORVU7Hr1G083870.7 Barley cytosol 25.64 63.41
KRH69595 Soybean plasma membrane 75.15 61.06
PGSC0003DMT400019924 Potato cytosol 72.98 60.96
KRH74566 Soybean plasma membrane 74.75 60.83
Solyc04g039730.2.1 Tomato plasma membrane 72.98 59.39
VIT_01s0127g00230.t01 Wine grape plasma membrane 72.98 59.11
CDY28194 Canola cytosol 35.9 59.09
HORVU6Hr1G093140.1 Barley mitochondrion, plastid 31.76 58.97
GSMUA_Achr2P23200_001 Banana plasma membrane 69.63 55.68
PGSC0003DMT400035086 Potato plasma membrane 65.68 55.5
Solyc05g005140.2.1 Tomato plasma membrane 65.48 55.06
GSMUA_Achr6P08840_001 Banana plasma membrane 65.88 55.02
EES02381 Sorghum golgi, plasma membrane, vacuole 67.06 53.63
Os01t0171000-01 Rice plasma membrane 66.08 53.34
TraesCS3B01G106100.1 Wheat plasma membrane 66.27 53.16
TraesCS3D01G091000.2 Wheat plasma membrane 66.47 53.15
HORVU3Hr1G016240.5 Barley plasma membrane 66.27 53.0
Zm00001d008724_P007 Maize plasma membrane 65.48 52.7
TraesCS3A01G091100.1 Wheat plasma membrane 65.88 51.86
Zm00001d039678_P002 Maize plasma membrane 66.47 50.91
CDX83534 Canola plasma membrane 60.16 47.66
CDX69484 Canola plasma membrane 59.17 47.32
CDY26481 Canola plasma membrane 59.17 47.1
CDY48073 Canola plasma membrane 59.37 47.03
CDY65182 Canola plasma membrane 56.21 44.74
CDY39685 Canola plasma membrane 55.82 44.43
CDX72249 Canola plasma membrane 55.62 44.27
CDY36679 Canola plasma membrane 54.04 44.12
CDX96350 Canola plasma membrane 54.24 44.0
CDX72833 Canola plasma membrane 54.04 43.84
CDY39449 Canola plasma membrane 51.68 42.6
CDX77614 Canola plasma membrane 51.48 42.51
CDY46116 Canola plasma membrane 50.1 42.12
CDX72403 Canola plasma membrane 50.1 42.12
CDX70667 Canola endoplasmic reticulum, golgi 59.57 41.94
CDX75351 Canola plasma membrane 50.69 41.72
CDY45042 Canola plasma membrane 50.1 41.5
CDX78667 Canola golgi, plasma membrane 59.17 41.49
CDX68975 Canola plasma membrane 50.3 41.46
CDX89615 Canola plasma membrane 49.7 41.31
CDY00320 Canola endoplasmic reticulum 1.38 41.18
CDX93126 Canola plasma membrane 49.51 41.15
CDY39211 Canola plasma membrane 46.75 40.93
CDY48450 Canola plasma membrane 48.52 40.2
CDX68670 Canola plasma membrane 47.53 40.17
CDX71165 Canola plasma membrane 48.52 39.81
CDY39690 Canola cytosol 47.14 39.37
CDY55159 Canola extracellular, plasma membrane, vacuole 46.35 38.65
CDY08807 Canola plasma membrane 46.35 38.65
CDY41531 Canola cytosol 43.39 38.0
CDX84436 Canola cytosol 43.39 38.0
CDX68299 Canola plasma membrane 52.86 37.8
CDX85768 Canola plasma membrane 45.36 37.64
CDY40089 Canola plasma membrane 45.17 37.48
CDX88452 Canola plasma membrane, vacuole 23.67 34.19
CDY52435 Canola plasma membrane, vacuole 23.67 34.19
CDY28301 Canola plasma membrane 22.29 28.46
CDY00321 Canola plasma membrane 30.57 26.54
CDY32113 Canola plasma membrane 30.77 26.53
CDY40456 Canola plasma membrane 30.97 26.3
CDY31708 Canola plasma membrane 30.37 26.24
CDX84187 Canola plasma membrane 29.98 25.81
CDX84346 Canola plasma membrane 29.59 25.68
CDX79610 Canola plasma membrane 29.98 25.59
CDX84610 Canola plasma membrane 29.98 25.59
CDY67608 Canola cytosol, mitochondrion, nucleus 3.94 25.0
CDX68667 Canola cytosol, mitochondrion, nucleus 3.94 25.0
CDY16762 Canola plasma membrane 29.59 24.92
CDX87267 Canola plasma membrane 28.99 24.46
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078J962UniProt:A0A078J962
EnsemblPlants:CDY61508ProteinID:CDY61508ProteinID:CDY61508.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301
GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00033965001InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sf
InterPro:LRR_dom_sfPFAM:PF00069ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001
PANTHER:PTHR27001:SF49InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI0004EF4A7ASEG:seg::
Description
BnaCnng37930DBnaCnng37930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J962]
Coordinates
chrLK034006:+:10034..12641
Molecular Weight (calculated)
56082.3 Da
IEP (calculated)
7.874
GRAVY (calculated)
-0.193
Length
507 amino acids
Sequence
(BLAST)
001: MVSQIVRLGV KDVFTQIAND VVGQGLDHGT FVLTLRRLNN NSLSGICPGS LSKIEGLTLV DISYNNLSGS LPKVSARTFK VIGNTLICGP KAVANCSAVF
101: PEPLMLPQDD PSDESGTRTN GHHLAVAFAA SFSAAFLVIF TSGMFLWWRY RRNKQIFFDV NAEQYDPEVS LGHLKRYTFK ELRSATNHFN SKNILGRGGY
201: GIVYKGHLSD GSLVAVKRLK DCNIAGGEVQ FQTEVETISL ALHRNLLRLR GFCSSNNERI LVYPYMPNGS VASRLKDHIR GEPALDWSRR KKIAVGTARG
301: LVYLHEQCDP KIIHRDVKAA NILLDEDFEA VVGDFGLAKL LDHRDSHVTT AVRGTVGHIA PEYLSTGQSS EKTDVFGFGI LLLELITGQK ALDFGRSSHQ
401: KGVMLDWVKK LHQEGKLKQL IDKDLNDKYD TVELEEIVQV ALLCTQFNPS NRPKMSEVMK MLEGDGLADR WEASQSGGAK SLPPPYYSDY IQESSLVVEA
501: IELSGPR
Best Arabidopsis Sequence Match ( AT1G60800.2 )
(BLAST)
001: MVSCTDGYVS SLDLPSQSLS GTLSPRIGNL TYLQSVVLQN NAITGPIPET IGRLEKLQSL DLSNNSFTGE IPASLGELKN LNYLRLNNNS LIGTCPESLS
101: KIEGLTLVDI SYNNLSGSLP KVSARTFKVI GNALICGPKA VSNCSAVPEP LTLPQDGPDE SGTRTNGHHV ALAFAASFSA AFFVFFTSGM FLWWRYRRNK
201: QIFFDVNEQY DPEVSLGHLK RYTFKELRSA TNHFNSKNIL GRGGYGIVYK GHLNDGTLVA VKRLKDCNIA GGEVQFQTEV ETISLALHRN LLRLRGFCSS
301: NQERILVYPY MPNGSVASRL KDNIRGEPAL DWSRRKKIAV GTARGLVYLH EQCDPKIIHR DVKAANILLD EDFEAVVGDF GLAKLLDHRD SHVTTAVRGT
401: VGHIAPEYLS TGQSSEKTDV FGFGILLLEL ITGQKALDFG RSAHQKGVML DWVKKLHQEG KLKQLIDKDL NDKFDRVELE EIVQVALLCT QFNPSHRPKM
501: SEVMKMLEGD GLAERWEATQ NGTGEHQPPP LPPGMVSSSP RVRYYSDYIQ ESSLVVEAIE LSGPR
Arabidopsis Description
NIK3Protein NSP-INTERACTING KINASE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZS4]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.