CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX85768	Canola	plasma membrane	98.85	98.85
AT5G10290.1	Thale cress	plasma membrane	93.78	93.47
VIT_00s0646g00030.t01	Wine grape	cytosol	51.39	89.97
VIT_00s0634g00030.t01	Wine grape	cytosol	32.73	85.11
VIT_00s0641g00010.t01	Wine grape	cytosol	49.92	84.02
CDY55159	Canola	extracellular, plasma membrane, vacuole	82.82	83.22
CDY08807	Canola	plasma membrane	82.65	83.06
KRH43169	Soybean	plasma membrane	77.25	77.38
Solyc11g008960.1.1	Tomato	plasma membrane	76.43	77.32
KRH59316	Soybean	plasma membrane	77.09	77.21
PGSC0003DMT400041690	Potato	plasma membrane	76.27	77.15
PGSC0003DMT400056093	Potato	plasma membrane	74.3	75.17
Solyc03g078520.2.1	Tomato	plasma membrane	74.63	75.12
OQU91137	Sorghum	plasma membrane	58.1	74.58
GSMUA_Achr8P23480_001	Banana	plasma membrane	72.67	73.63
Os02t0283800-01	Rice	plasma membrane	70.7	71.17
KRG97568	Soybean	plasma membrane	70.54	71.12
TraesCS3B01G334400.2	Wheat	plasma membrane	70.05	70.86
TraesCS3D01G299800.1	Wheat	plasma membrane	69.89	70.58
VIT_00s0848g00010.t01	Wine grape	plasma membrane, plastid	23.57	69.23
KRH31305	Soybean	plasma membrane	71.69	69.19
Zm00001d015971_P004	Maize	plasma membrane	69.56	68.77
EES04934	Sorghum	plasma membrane	68.9	67.58
Zm00001d033652_P002	Maize	plasma membrane	70.7	63.34
TraesCS3A01G302200.1	Wheat	plastid	66.78	62.77
HORVU3Hr1G073960.5	Barley	plastid	70.21	58.85
CDX84436	Canola	cytosol	53.68	56.65
CDY41531	Canola	cytosol	53.52	56.48
CDY28194	Canola	cytosol	27.33	54.22
CDX72403	Canola	plasma membrane	52.37	53.07
CDY46116	Canola	plasma membrane	52.21	52.9
CDY36679	Canola	plasma membrane	53.36	52.5
CDX75351	Canola	plasma membrane	52.7	52.27
CDX68975	Canola	plasma membrane	52.54	52.2
CDX96350	Canola	plasma membrane	53.36	52.16
CDY45042	Canola	plasma membrane	52.21	52.12
CDX72833	Canola	plasma membrane	53.19	52.0
CDX93126	Canola	plasma membrane	50.41	50.49
GSMUA_Achr2P22230_001	Banana	plasma membrane	59.74	50.41
CDX89615	Canola	plasma membrane	50.25	50.33
CDY48450	Canola	plasma membrane	50.08	50.0
CDX71165	Canola	plasma membrane	50.08	49.51
CDY39690	Canola	cytosol	48.28	48.6
CDY00320	Canola	endoplasmic reticulum	1.31	47.06
CDX69484	Canola	plasma membrane	48.77	47.0
CDX83534	Canola	plasma membrane	49.1	46.88
CDY48073	Canola	plasma membrane	48.94	46.72
CDY26481	Canola	plasma membrane	48.28	46.31
CDX68299	Canola	plasma membrane	52.7	45.42
CDY61508	Canola	cytosol	37.48	45.17
CDY44608	Canola	cytosol	37.48	45.17
CDX77614	Canola	plasma membrane	44.84	44.63
CDY39449	Canola	plasma membrane	44.84	44.55
CDY46185	Canola	golgi, plasma membrane	45.34	43.55
CDX72249	Canola	plasma membrane	45.34	43.49
CDY61461	Canola	golgi, plasma membrane	45.17	43.46
CDY65182	Canola	plasma membrane	44.68	42.86
CDY39685	Canola	plasma membrane	44.68	42.86
CDY28301	Canola	plasma membrane	27.17	41.81
CDY39211	Canola	plasma membrane	39.61	41.8
CDX68670	Canola	plasma membrane	40.92	41.67
CDX70667	Canola	endoplasmic reticulum, golgi	47.63	40.42
CDX78667	Canola	golgi, plasma membrane	47.3	39.97
CDY00321	Canola	plasma membrane	33.22	34.76
CDX84346	Canola	plasma membrane	33.22	34.76
CDY52435	Canola	plasma membrane, vacuole	19.97	34.76
CDX88452	Canola	plasma membrane, vacuole	19.64	34.19
CDX87267	Canola	plasma membrane	32.57	33.11
CDY16762	Canola	plasma membrane	32.57	33.06
CDY32113	Canola	plasma membrane	31.59	32.82
CDX79610	Canola	plasma membrane	31.26	32.15
CDX84610	Canola	plasma membrane	31.26	32.15
CDY40456	Canola	plasma membrane	31.26	31.99
CDX84187	Canola	plasma membrane	30.11	31.24
CDY31708	Canola	plasma membrane	29.95	31.18
CDY67608	Canola	cytosol, mitochondrion, nucleus	3.11	23.75
CDX68667	Canola	cytosol, mitochondrion, nucleus	3.11	23.75

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078HS28	UniProt:A0A078HS28
EnsemblPlants:CDY40089	ProteinID:CDY40089	ProteinID:CDY40089.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00069007001
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PFscan:PS51257	PANTHER:PTHR27001	PANTHER:PTHR27001:SF33	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EC55E2	SEG:seg	:	:

Description

BnaC02g00410DBnaC02g00410D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HS28]

Coordinates

chrLK032463:-:158063..161871

Molecular Weight (calculated)

68119.1 Da

IEP (calculated)

5.868

GRAVY (calculated)

-0.158

Length

611 amino acids

Sequence
(BLAST)

001: MFTFQKMAMS LTVLILACLL SLVSPDAQGD ALFALRMSLR ALPNQLSDWN QNQVNPCTWS QVICDDKNFV TSLTLSDMNF SGTLSSRIGI LGTLKTLTLK
101: GNGIAGGIPE EFGNLTSLTS LDLEDNELSG FIPSTLGNLK KLQFLTLSRN KLNGTIPVSF TGLPNLINLL LDSNHLSGQI PQSLFEIPKY NFTGNNLNCG
201: VGQPHPCVSE VARSGDSSKP KTGIIAGVVA GVTVILFGIL VFLFCRDRHK GYKRDVFVDV AGEVDRRIAF GQLKRFAWRE LQLATDNFSE KNVLGQGGFG
301: KVYKGVLPDN TKVAVKRLTD FESPGGDAAF QREVEMISVA VHKNLLRLIG FCTTQTERLL VYPFMQNLSL AHRLREIKAG DPVLDWETRK RIALGAARGF
401: EYLHEHCNPK IIHRDVKAAN VLLDEDFEAV VGDFGLAKLV DVRRTNVTTQ VRGTMGHIAP EYLSTGKSSE RTDVFGYGIM LLELVTGQRA IDFSRLEEED
501: DVLLLDHVKK LEREKRLGAI VDKNLDGDYV KEEVEMMIQV ALLCTQGSPE DRPVMSEVVR MLEGEGLAER WEEWQNVEVT RRHEFERMQR RFDWGEDSMN
601: NQDAIELSGG R

Best Arabidopsis Sequence Match ( AT5G10290.2 )
(BLAST)

001: MRMFSLQKMA MAFTLLFFAC LCSFVSPDAQ GDALFALRIS LRALPNQLSD WNQNQVNPCT WSQVICDDKN FVTSLTLSDM NFSGTLSSRV GILENLKTLT
101: LKGNGITGEI PEDFGNLTSL TSLDLEDNQL TGRIPSTIGN LKKLQFLTLS RNKLNGTIPE SLTGLPNLLN LLLDSNSLSG QIPQSLFEIP KYNFTSNNLN
201: CGGRQPHPCV SAVAHSGDSS KPKTGIIAGV VAGVTVVLFG ILLFLFCKDR HKGYRRDVFV DVAGEVDRRI AFGQLKRFAW RELQLATDNF SEKNVLGQGG
301: FGKVYKGVLP DNTKVAVKRL TDFESPGGDA AFQREVEMIS VAVHRNLLRL IGFCTTQTER LLVYPFMQNL SLAHRLREIK AGDPVLDWET RKRIALGAAR
401: GFEYLHEHCN PKIIHRDVKA ANVLLDEDFE AVVGDFGLAK LVDVRRTNVT TQVRGTMGHI APEYLSTGKS SERTDVFGYG IMLLELVTGQ RAIDFSRLEE
501: EDDVLLLDHV KKLEREKRLG AIVDKNLDGE YIKEEVEMMI QVALLCTQGS PEDRPVMSEV VRMLEGEGLA ERWEEWQNVE VTRRHEFERL QRRFDWGEDS
601: MHNQDAIELS GGR

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Source:UniProtKB/Swiss-Prot;Acc:C0LGT1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.