CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 5
extracellular 3
endoplasmic reticulum 4
vacuole 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0634g00030.t01	Wine grape	cytosol	42.02	85.11
VIT_00s0646g00030.t01	Wine grape	cytosol	62.18	84.81
VIT_00s0641g00010.t01	Wine grape	cytosol	59.24	77.69
TraesCS3B01G334400.2	Wheat	plasma membrane	91.18	71.85
TraesCS3D01G299800.1	Wheat	plasma membrane	91.18	71.74
VIT_00s0848g00010.t01	Wine grape	plasma membrane, plastid	29.2	66.83
Zm00001d033652_P002	Maize	plasma membrane	95.59	66.72
TraesCS3A01G302200.1	Wheat	plastid	90.76	66.46
GSMUA_Achr8P23480_001	Banana	plasma membrane	83.4	65.84
EES04934	Sorghum	plasma membrane	85.29	65.17
Solyc11g008960.1.1	Tomato	plasma membrane	77.94	61.42
KRH59316	Soybean	plasma membrane	78.36	61.15
KRH43169	Soybean	plasma membrane	78.15	60.98
PGSC0003DMT400041690	Potato	plasma membrane	77.31	60.93
Bra024369.1-P	Field mustard	plasma membrane	71.01	60.14
Solyc03g078520.2.1	Tomato	plasma membrane	75.42	59.14
HORVU3Hr1G073960.5	Barley	plastid	90.55	59.12
PGSC0003DMT400056093	Potato	plasma membrane	75.0	59.11
KRG97568	Soybean	plasma membrane	74.79	58.75
Bra028592.1-P	Field mustard	plasma membrane	74.79	58.27
CDX85768	Canola	plasma membrane	74.79	58.27
CDY40089	Canola	plasma membrane	74.58	58.1
AT5G10290.1	Thale cress	plasma membrane	74.37	57.75
KRH31305	Soybean	plasma membrane	75.63	56.87
CDY08807	Canola	plasma membrane	71.43	55.92
CDY55159	Canola	extracellular, plasma membrane, vacuole	71.22	55.76
AT5G65240.2	Thale cress	plasma membrane	71.64	53.28
EES10085	Sorghum	plasma membrane	59.45	45.72
EES07030	Sorghum	plasma membrane	56.51	42.97
EES12285	Sorghum	plasma membrane	55.88	42.77
KXG24562	Sorghum	plasma membrane	56.09	42.31
EER88222	Sorghum	plasma membrane	52.1	39.43
EES05592	Sorghum	plasma membrane	51.26	38.98
EES02381	Sorghum	golgi, plasma membrane, vacuole	50.63	38.01
EES06565	Sorghum	plasma membrane	47.48	36.04
KXG25244	Sorghum	plastid	50.84	32.84
KXG21439	Sorghum	golgi, mitochondrion, plasma membrane	42.86	32.33
EES02154	Sorghum	golgi, plasma membrane	23.95	31.32
EES17498	Sorghum	plasma membrane	34.24	26.04
EER95121	Sorghum	plasma membrane	31.3	25.13

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	UniProt:A0A1Z5S5C4	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	EnsemblPlants:OQU91137
ProteinID:OQU91137	ProteinID:OQU91137.1	PFAM:PF00069	PFAM:PF08263	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF33	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
EnsemblPlantsGene:SORBI_3001G123000	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	UniParc:UPI000B8BB2E2
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:9686625..9690628

Molecular Weight (calculated)

53242.3 Da

IEP (calculated)

4.694

GRAVY (calculated)

-0.288

Length

476 amino acids

Sequence
(BLAST)

001: MELLNIILVI ASLLPFSASD RQGDALYDMK LKLNATGSQL SDWNQNQVNP CTWNSVICDN NNNVVQVTLA SMGFTGVLSP RIGDLEYLNV LSLPGNNITG
101: GIPEQFGNLS RFSGNNLTCG ANFLHQCASN MSYQELQLAT DNFSEKNVLG QGGFGKVYKG ALPDGTKIAV KRLTDYESPG GEAAFLREVE LISVAVHRNL
201: LRLIGFCTTQ TERLLVYPFM QNLSVAYRLR EFKPGEPILD WSARKRVAIG TARGLEYLHE HCNPKIIHRD VKAANVLLDE GFEPVVGDFG LAKLVDVQKT
301: SVTTQVRGTM GHIAPEYLST GKSSERTDVF GYGIMLLELV TGQRAIDFSR LEEEDDVLLL DHYAYDLAAN SQVKKLQREG HLDAIVDRNL NNNYNGQEVE
401: MMIQIALLCT QASPEDRPSM SEVVRMLEGE GLAERWEEWQ QVEVTRRQDY ERMQQRFDWG EDSVYNQDAI ELSAGR

Best Arabidopsis Sequence Match ( AT5G10290.1 )
(BLAST)

001: MRMFSLQKMA MAFTLLFFAC LCSFVSPDAQ GDALFALRIS LRALPNQLSD WNQNQVNPCT WSQVICDDKN FVTSLTLSDM NFSGTLSSRV GILENLKTLT
101: LKGNGITGEI PEDFGNLTSL TSLDLEDNQL TGRIPSTIGN LKKLQFLTLS RNKLNGTIPE SLTGLPNLLN LLLDSNSLSG QIPQSLFEIP KYNFTSNNLN
201: CGGRQPHPCV SAVAHSGDSS KPKTGIIAGV VAGVTVVLFG ILLFLFCKDR HKGYRRDVFV DVAGEVDRRI AFGQLKRFAW RELQLATDNF SEKNVLGQGG
301: FGKVYKGVLP DNTKVAVKRL TDFESPGGDA AFQREVEMIS VAVHRNLLRL IGFCTTQTER LLVYPFMQNL SLAHRLREIK AGDPVLDWET RKRIALGAAR
401: GFEYLHEHCN PKIIHRDVKA ANVLLDEDFE AVVGDFGLAK LVDVRRTNVT TQVRGTMGHI APEYLSTGKS SERTDVFGYG IMLLELVTGQ RAIDFSRLEE
501: EDDVLLLDHV KKLEREKRLG AIVDKNLDGE YIKEEVEMMI QVALLCTQGS PEDRPVMSEV VRMLEGEGLA ERWEEWQNVE VTRRHEFERL QRRFDWGEDS
601: MHNQDAIELS GGR

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Source:UniProtKB/Swiss-Prot;Acc:C0LGT1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.