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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 7
  • golgi 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, secretory
BaCelLo:secretory
iPSORT:mitochondrion
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d028560_P020 Maize plasma membrane 96.96 96.31
Os03t0266800-01 Rice plasma membrane 91.57 91.41
Zm00001d047842_P003 Maize plasma membrane 97.81 91.34
TraesCS4D01G212600.1 Wheat plasma membrane 89.88 90.49
TraesCS4A01G092500.1 Wheat plasma membrane 89.38 89.98
HORVU4Hr1G060740.1 Barley plasma membrane 89.38 89.83
TraesCS4B01G211800.1 Wheat plasma membrane 88.87 89.47
GSMUA_Achr3P04890_001 Banana plasma membrane 76.39 76.39
GSMUA_Achr4P02060_001 Banana cytosol 63.58 76.01
VIT_02s0087g00170.t01 Wine grape plasma membrane 72.01 71.64
KRH76408 Soybean plasma membrane 70.49 70.25
KRH39710 Soybean plasma membrane 69.98 69.75
Bra005319.1-P Field mustard plasma membrane 57.5 69.59
AT2G35620.3 Thale cress plasma membrane 68.8 69.27
Solyc08g074760.2.1 Tomato plasma membrane 68.8 69.27
AT1G31420.3 Thale cress plasma membrane 68.97 69.09
Bra023017.1-P Field mustard plasma membrane 62.06 68.27
Bra017307.1-P Field mustard plasma membrane 66.95 67.52
CDY32113 Canola plasma membrane 66.61 67.18
CDX84187 Canola plasma membrane 66.44 66.89
CDY40456 Canola plasma membrane 67.28 66.83
CDY31708 Canola plasma membrane 66.1 66.78
CDX79610 Canola plasma membrane 66.78 66.67
CDX84610 Canola plasma membrane 66.78 66.67
EES17498 Sorghum plasma membrane 47.72 45.21
EES02154 Sorghum golgi, plasma membrane 26.64 43.41
EES07030 Sorghum plasma membrane 33.9 32.11
EES06565 Sorghum plasma membrane 33.9 32.06
KXG24562 Sorghum plasma membrane 34.06 32.01
EES05592 Sorghum plasma membrane 33.73 31.95
EES12285 Sorghum plasma membrane 33.39 31.83
EER88222 Sorghum plasma membrane 33.73 31.8
OQU91137 Sorghum plasma membrane 25.13 31.3
EES02381 Sorghum golgi, plasma membrane, vacuole 33.39 31.23
EES10085 Sorghum plasma membrane 32.38 31.02
KXG21439 Sorghum golgi, mitochondrion, plasma membrane 31.87 29.95
EES04934 Sorghum plasma membrane 30.69 29.21
KXG25244 Sorghum plastid 30.69 24.69
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:18.4.1.13.1Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:8054286UniProt:C5WQ40EnsemblPlants:EER95121
ProteinID:EER95121ProteinID:EER95121.1InterPro:FEI1/2GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0005975GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009058
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0019538GO:GO:0030244InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptPFAM:PF00069PFAM:PF08263PFAM:PF13855
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR44289PANTHER:PTHR44289:SF1InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSMART:SM00220EnsemblPlantsGene:SORBI_3001G425700SUPFAM:SSF52058SUPFAM:SSF56112unigene:Sbi.3749
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A83144RefSeq:XP_002468123.1SEG:seg
Description
hypothetical protein
Coordinates
chr1:-:70541481..70547885
Molecular Weight (calculated)
65528.6 Da
IEP (calculated)
5.381
GRAVY (calculated)
-0.085
Length
593 amino acids
Sequence
(BLAST)
001: MGSFLRKQPS YLFVLIVLHL VAHEARTLSS DGEALLAFKK AVTNSDGIFL NWREQDADPC NWKGVRCDSH SKRVINLILA YHRLVGPIPP EIGRLNQLQT
101: LSLQGNSLYG SLPPELGNCT KLQQLYLQGN YLSGYIPSEF GDLVELETLD LSSNTLSGSI PHSLDKLSKL TSFNVSMNFL TGAIPSSGSL INFNETSFVG
201: NLGLCGKQIN SVCKDALQSP SNGLQSPSPD DMINKRNGNS TRLVISAVAT VGALLLVALM CFWGCFLYKN FGKKDMRGFR VELCGGSSVV MFHGDLPYSS
301: KDILKKLETM DEENIIGAGG FGTVYKLAMD DGNVFALKRI VKTNEGLDRF FDRELEILGS VKHRYLVNLR GYCNSPSSKL LIYDYLPGGS LDEVLHEKSE
401: QLDWDARINI ILGAAKGLSY LHHDCSPRII HRDIKSSNIL LDGNFEARVS DFGLAKLLED EESHITTIVA GTFGYLAPEY MQFGRATEKT DVYSFGVLVL
501: EILSGKRPTD ASFIEKGLNI VGWLNFLAGE NREREIVDLN CEGVQTETLD ALLSLAKQCV SSLPEERPTM HRVVQMLESD VITPCPSDFY DSE
Best Arabidopsis Sequence Match ( AT1G31420.2 )
(BLAST)
001: MMGICEMKSC CSWLLLISLL CSLSNESQAI SPDGEALLSF RNAVTRSDSF IHQWRPEDPD PCNWNGVTCD AKTKRVITLN LTYHKIMGPL PPDIGKLDHL
101: RLLMLHNNAL YGAIPTALGN CTALEEIHLQ SNYFTGPIPA EMGDLPGLQK LDMSSNTLSG PIPASLGQLK KLSNFNVSNN FLVGQIPSDG VLSGFSKNSF
201: IGNLNLCGKH VDVVCQDDSG NPSSHSQSGQ NQKKNSGKLL ISASATVGAL LLVALMCFWG CFLYKKLGKV EIKSLAKDVG GGASIVMFHG DLPYSSKDII
301: KKLEMLNEEH IIGCGGFGTV YKLAMDDGKV FALKRILKLN EGFDRFFERE LEILGSIKHR YLVNLRGYCN SPTSKLLLYD YLPGGSLDEA LHERGEQLDW
401: DSRVNIIIGA AKGLSYLHHD CSPRIIHRDI KSSNILLDGN LEARVSDFGL AKLLEDEESH ITTIVAGTFG YLAPEYMQSG RATEKTDVYS FGVLVLEVLS
501: GKRPTDASFI EKGLNVVGWL KFLISEKRPR DIVDPNCEGM QMESLDALLS IATQCVSPSP EERPTMHRVV QLLESEVMTP CPSEFYDSSS D
Arabidopsis Description
FEI1Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4I9D5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.