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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 10
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
EER95525
EES03532
EES07030
EES09539
EES12285
EES14176
EES19530
KXG24562
KXG33866
KXG40206
OQU86764
OQU93218

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G34210.1 EES09539 AT5G48380.1 19616764
AT1G34210.1 EES19530 AT5G48380.1 19616764
AT1G34210.1 KXG33866 AT5G48380.1 19616764
AT1G71830.1 EES07030 AT1G71830.1 11397085
AT1G71830.1 EES12285 AT1G71830.1 11397085
AT1G71830.1 KXG24562 AT1G71830.1 11397085
AT1G71830.1 EES07030 AT1G71830.1 16621602
AT1G71830.1 EES12285 AT1G71830.1 16621602
AT1G71830.1 KXG24562 AT1G71830.1 16621602
AT1G71830.1 EES14176 AT2G33500.1 16473966
AT1G71830.1 EER95525 AT3G09840.1 15592873
AT1G71830.1 KXG40206 AT3G09840.1 15592873
AT1G71830.1 EER95525 AT3G09840.1 16473966
AT1G71830.1 KXG40206 AT3G09840.1 16473966
AT1G71830.1 EER95525 AT3G09840.1 16621602
AT1G71830.1 KXG40206 AT3G09840.1 16621602
AT1G71830.1 EER95525 AT3G09840.1 17693538
AT1G71830.1 KXG40206 AT3G09840.1 17693538
AT1G71830.1 OQU93218 AT3G54840.1 16621602
AT1G71830.1 EES03532 AT4G39400.1 16473966
AT1G71830.1 OQU86764 AT4G39400.1 16473966
AT2G13790.1 EES03532 AT4G39400.1 17600708
AT2G13790.1 OQU86764 AT4G39400.1 17600708
AT2G13790.1 EES09539 AT5G48380.1 19616764
AT2G13790.1 EES19530 AT5G48380.1 19616764
AT2G13790.1 KXG33866 AT5G48380.1 19616764
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d016928_P010 Maize plasma membrane 97.6 97.6
Zm00001d050868_P004 Maize plasma membrane 95.05 95.51
TraesCS6A01G203600.2 Wheat cytosol 90.42 92.94
TraesCS6D01G186900.2 Wheat plasma membrane 89.3 92.55
TraesCS6B01G223700.3 Wheat plasma membrane 91.85 91.56
HORVU6Hr1G049080.7 Barley plasma membrane 91.69 91.4
GSMUA_Achr7P17210_001 Banana cytosol 69.01 87.63
EES12285 Sorghum plasma membrane 86.74 87.3
GSMUA_Achr2P14850_001 Banana plastid 85.14 85.28
KXG24562 Sorghum plasma membrane 85.94 85.26
GSMUA_AchrUn_... Banana plasma membrane 85.78 85.24
KRG91762 Soybean plasma membrane 84.34 84.62
VIT_18s0164g00070.t01 Wine grape plasma membrane 84.03 84.29
VIT_07s0031g01410.t01 Wine grape plasma membrane 84.03 84.29
KRH35013 Soybean plasma membrane 83.87 84.13
KRH70218 Soybean endoplasmic reticulum 83.71 83.97
Solyc04g072570.2.1 Tomato extracellular 84.19 83.78
GSMUA_Achr10P... Banana plasma membrane 83.23 83.23
GSMUA_Achr7P11620_001 Banana plasma membrane 85.46 83.2
Bra003911.1-P Field mustard plasma membrane 75.56 82.84
CDY36679 Canola plasma membrane 82.11 82.77
AT1G71830.1 Thale cress plasma membrane 81.95 82.08
PGSC0003DMT400032797 Potato cytosol, plasma membrane, plastid 67.89 82.05
CDX96350 Canola plasma membrane 81.79 81.92
AT1G34210.1 Thale cress plasma membrane 81.95 81.69
KRH10503 Soybean cytosol, plastid 61.02 81.62
CDX72833 Canola plasma membrane 81.47 81.6
PGSC0003DMT400045607 Potato cytosol, plasma membrane, plastid 67.89 80.95
PGSC0003DMT400070819 Potato plasma membrane 80.99 79.97
Bra037006.1-P Field mustard mitochondrion 61.18 79.96
Solyc01g104970.2.1 Tomato plasma membrane 78.59 79.87
Solyc10g047140.1.1 Tomato plasma membrane 77.32 78.7
Bra016112.1-P Field mustard plasma membrane 75.72 78.09
KRH43924 Soybean plasma membrane 76.68 77.92
VIT_12s0055g01160.t01 Wine grape plasma membrane 75.56 77.54
CDY46116 Canola plasma membrane 74.44 77.28
CDX72403 Canola plasma membrane 74.28 77.11
CDY45042 Canola plasma membrane 74.92 76.63
CDX68975 Canola plasma membrane 75.24 76.59
Bra034562.1-P Field mustard plasma membrane 69.17 76.5
CDX75351 Canola plasma membrane 75.24 76.46
Bra011439.1-P Field mustard plasma membrane 63.42 76.35
VIT_12s0055g01280.t01 Wine grape plasma membrane 61.82 75.44
GSMUA_Achr10P... Banana mitochondrion 86.74 74.9
AT2G13790.1 Thale cress plasma membrane 71.73 72.42
KRH58311 Soybean plasma membrane 71.73 72.3
AT4G33430.2 Thale cress plasma membrane 76.2 72.05
Bra032128.1-P Field mustard cytosol 55.75 71.66
CDY28301 Canola plasma membrane 45.37 71.54
CDX89615 Canola plasma membrane 68.53 70.33
CDX93126 Canola plasma membrane 68.37 70.16
CDX68299 Canola plasma membrane 79.07 69.82
CDY48450 Canola plasma membrane 67.73 69.28
AT2G13800.3 Thale cress plasma membrane 66.13 68.89
Bra041056.1-P Field mustard plasma membrane 56.87 68.86
VIT_12s0055g01150.t01 Wine grape plasma membrane 65.97 67.93
Bra032125.1-P Field mustard plasma membrane 57.67 67.23
CDX71165 Canola plasma membrane 65.34 66.18
KRH42193 Soybean plasma membrane 65.02 66.07
CDY39690 Canola cytosol 63.9 65.9
KRH58312 Soybean plasma membrane 63.58 64.72
Bra013136.1-P Field mustard plasma membrane 54.79 59.34
OQU91137 Sorghum plasma membrane 42.97 56.51
EER88222 Sorghum plasma membrane 53.35 53.1
VIT_12s0121g00310.t01 Wine grape cytosol, mitochondrion 24.76 52.19
EES05592 Sorghum plasma membrane 52.08 52.08
EES04934 Sorghum plasma membrane 50.96 51.2
EES02381 Sorghum golgi, plasma membrane, vacuole 51.44 50.79
EES10085 Sorghum plasma membrane 46.49 47.01
EES06565 Sorghum plasma membrane 46.81 46.73
KXG25244 Sorghum plastid 50.48 42.88
KXG21439 Sorghum golgi, mitochondrion, plasma membrane 43.13 42.79
EER95121 Sorghum plasma membrane 32.11 33.9
EES02154 Sorghum golgi, plasma membrane 19.65 33.79
EES17498 Sorghum plasma membrane 31.95 31.95
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:11.3.2.1.2MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:8070545UniProt:C5XVP5
EnsemblPlants:EES07030ProteinID:EES07030ProteinID:EES07030.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0004675GO:GO:0004871GO:GO:0005102GO:GO:0005488
GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0006464
GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0007166GO:GO:0007178GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310
GO:GO:0016740GO:GO:0019538GO:GO:0038023InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675
InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptPFAM:PF00069PFAM:PF00560
PFAM:PF08263ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF494
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSInterPro:SERKSMART:SM00220EnsemblPlantsGene:SORBI_3004G189900SUPFAM:SSF52058
SUPFAM:SSF56112unigene:Sbi.11657InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0001A85CF6
RefSeq:XP_002454054.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr4:-:54181040..54187021
Molecular Weight (calculated)
68555.2 Da
IEP (calculated)
5.563
GRAVY (calculated)
-0.154
Length
626 amino acids
Sequence
(BLAST)
001: MAAAAAAGSW WAVVLAVAVL LGPGRVVANT EGDALYSLRQ SLKDANNVLQ SWDPTLVNPC TWFHVTCNND NSVIRVDLGN AQLSGVLVPQ LGQLKNLQYL
101: ELYSNNISGT IPPELGNLTN LVSLDLYMNN FSGSIPDSLG NLLKLRFLRL NNNSLVGQIP VSLTNISTLQ VLDLSNNNLS GQVPSTGSFS LFTPISFANN
201: PGLCGPGTTK PCPGAPPFSP PPPFNPPSPP TQSTGASSTG AIAGGVAAGA ALVFAVPAIA FAMWRRRKPE EHFFDVPAEE DPEVHLGQLK KFSLRELQVA
301: TDNFSNKNIL GRGGFGKVYK GRLADGSLVA VKRLKEERTP GGELQFQTEV EMISMAVHRN LLRLRGFCMT PTERLLVYPY MANGSVASRL RERQQSEPPL
401: KWETRRRIAL GSARGLSYLH DHCDPKIIHR DVKAANILLD EDFEAVVGDF GLAKLMDYKD THVTTAVRGT IGHIAPEYLS TGKSSEKTDV FGYGIMLLEL
501: ITGQRAFDLA RLANDDDVML LDWVKGLLKE KKVEMLVDPD LQNAYEEIEV ENLIQVALLC TQGSPLDRPK MSEVVRMLEG DGLAERWDEW QKVEVVRQEA
601: ESAPLRNDWI VDSTYNLRAV ELSGPR
Best Arabidopsis Sequence Match ( AT1G71830.1 )
(BLAST)
001: MESSYVVFIL LSLILLPNHS LWLASANLEG DALHTLRVTL VDPNNVLQSW DPTLVNPCTW FHVTCNNENS VIRVDLGNAE LSGHLVPELG VLKNLQYLEL
101: YSNNITGPIP SNLGNLTNLV SLDLYLNSFS GPIPESLGKL SKLRFLRLNN NSLTGSIPMS LTNITTLQVL DLSNNRLSGS VPDNGSFSLF TPISFANNLD
201: LCGPVTSHPC PGSPPFSPPP PFIQPPPVST PSGYGITGAI AGGVAAGAAL LFAAPAIAFA WWRRRKPLDI FFDVPAEEDP EVHLGQLKRF SLRELQVASD
301: GFSNKNILGR GGFGKVYKGR LADGTLVAVK RLKEERTPGG ELQFQTEVEM ISMAVHRNLL RLRGFCMTPT ERLLVYPYMA NGSVASCLRE RPPSQPPLDW
401: PTRKRIALGS ARGLSYLHDH CDPKIIHRDV KAANILLDEE FEAVVGDFGL AKLMDYKDTH VTTAVRGTIG HIAPEYLSTG KSSEKTDVFG YGIMLLELIT
501: GQRAFDLARL ANDDDVMLLD WVKGLLKEKK LEMLVDPDLQ TNYEERELEQ VIQVALLCTQ GSPMERPKMS EVVRMLEGDG LAEKWDEWQK VEILREEIDL
601: SPNPNSDWIL DSTYNLHAVE LSGPR
Arabidopsis Description
SERK1SERK1 [Source:UniProtKB/TrEMBL;Acc:A0A178W829]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.