Factsheet for GSMUA_AchrUn_randomP21310_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	golgi
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr1P03160_001
GSMUA_Achr1P05250_001
GSMUA_Achr2P05730_001
GSMUA_Achr2P14850_001
GSMUA_Achr4P08920_001
GSMUA_Achr4P26800_001
GSMUA_Achr4P29310_001
GSMUA_Achr5P10670_001
GSMUA_Achr5P15500_001
GSMUA_Achr6P06130_001
GSMUA_Achr6P28640_001
GSMUA_Achr6P35950_001
GSMUA_Achr7P11620_001
GSMUA_Achr7P17210_001
GSMUA_Achr9P08150_001
GSMUA_Achr9P23550_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G34210.1	GSMUA_Achr2P05730_001	AT5G48380.1	19616764
AT1G34210.1	GSMUA_Achr6P28640_001	AT5G48380.1	19616764
AT1G34210.1	GSMUA_Achr9P08150_001	AT5G48380.1	19616764
AT1G71830.1	GSMUA_Achr10P...	AT1G71830.1	11397085
AT1G71830.1	GSMUA_Achr10P...	AT1G71830.1	11397085
AT1G71830.1	GSMUA_Achr2P14850_001	AT1G71830.1	11397085
AT1G71830.1	GSMUA_Achr7P11620_001	AT1G71830.1	11397085
AT1G71830.1	GSMUA_Achr7P17210_001	AT1G71830.1	11397085
AT1G71830.1	GSMUA_AchrUn_...	AT1G71830.1	11397085
AT1G71830.1	GSMUA_Achr10P...	AT1G71830.1	16621602
AT1G71830.1	GSMUA_Achr10P...	AT1G71830.1	16621602
AT1G71830.1	GSMUA_Achr2P14850_001	AT1G71830.1	16621602
AT1G71830.1	GSMUA_Achr7P11620_001	AT1G71830.1	16621602
AT1G71830.1	GSMUA_Achr7P17210_001	AT1G71830.1	16621602
AT1G71830.1	GSMUA_AchrUn_...	AT1G71830.1	16621602
AT1G71830.1	GSMUA_Achr10P...	AT2G33500.1	16473966
AT1G71830.1	GSMUA_Achr11P...	AT2G33500.1	16473966
AT1G71830.1	GSMUA_Achr6P06130_001	AT2G33500.1	16473966
AT1G71830.1	GSMUA_Achr4P26800_001	AT3G09840.1	15592873
AT1G71830.1	GSMUA_Achr5P15500_001	AT3G09840.1	15592873
AT1G71830.1	GSMUA_Achr9P23550_001	AT3G09840.1	15592873
AT1G71830.1	GSMUA_Achr4P26800_001	AT3G09840.1	16473966
AT1G71830.1	GSMUA_Achr5P15500_001	AT3G09840.1	16473966
AT1G71830.1	GSMUA_Achr9P23550_001	AT3G09840.1	16473966
AT1G71830.1	GSMUA_Achr4P26800_001	AT3G09840.1	16621602
AT1G71830.1	GSMUA_Achr5P15500_001	AT3G09840.1	16621602
AT1G71830.1	GSMUA_Achr9P23550_001	AT3G09840.1	16621602
AT1G71830.1	GSMUA_Achr4P26800_001	AT3G09840.1	17693538
AT1G71830.1	GSMUA_Achr5P15500_001	AT3G09840.1	17693538
AT1G71830.1	GSMUA_Achr9P23550_001	AT3G09840.1	17693538
AT1G71830.1	GSMUA_Achr1P03160_001	AT3G54840.1	16621602
AT1G71830.1	GSMUA_Achr4P29310_001	AT3G54840.1	16621602
AT1G71830.1	GSMUA_Achr5P10670_001	AT3G54840.1	16621602
AT1G71830.1	GSMUA_Achr1P05250_001	AT4G39400.1	16473966
AT1G71830.1	GSMUA_Achr4P08920_001	AT4G39400.1	16473966
AT1G71830.1	GSMUA_Achr6P35950_001	AT4G39400.1	16473966
AT1G71830.1	GSMUA_AchrUn_...	AT4G39400.1	16473966
AT2G13790.1	GSMUA_Achr1P05250_001	AT4G39400.1	17600708
AT2G13790.1	GSMUA_Achr4P08920_001	AT4G39400.1	17600708
AT2G13790.1	GSMUA_Achr6P35950_001	AT4G39400.1	17600708
AT2G13790.1	GSMUA_AchrUn_...	AT4G39400.1	17600708
AT2G13790.1	GSMUA_Achr2P05730_001	AT5G48380.1	19616764
AT2G13790.1	GSMUA_Achr6P28640_001	AT5G48380.1	19616764
AT2G13790.1	GSMUA_Achr9P08150_001	AT5G48380.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0174700-01	Rice	plasma membrane	86.67	87.5
GSMUA_Achr7P17210_001	Banana	cytosol	68.25	87.22
GSMUA_Achr2P14850_001	Banana	plastid	86.51	87.2
TraesCS7D01G291200.3	Wheat	plasma membrane	85.24	86.47
TraesCS6D01G186900.2	Wheat	plasma membrane	82.86	86.42
TraesCS7A01G293300.3	Wheat	plasma membrane	85.24	86.33
TraesCS6A01G203600.2	Wheat	cytosol	83.33	86.21
GSMUA_Achr10P...	Banana	plasma membrane	85.56	86.1
VIT_07s0031g01410.t01	Wine grape	plasma membrane	85.08	85.9
VIT_18s0164g00070.t01	Wine grape	plasma membrane	85.08	85.9
TraesCS7B01G182300.1	Wheat	plasma membrane	84.76	85.85
EES07030	Sorghum	plasma membrane	85.24	85.78
KXG24562	Sorghum	plasma membrane	85.71	85.58
Zm00001d016928_P010	Maize	plasma membrane	84.92	85.46
KRG91762	Soybean	plasma membrane	84.6	85.42
Zm00001d024430_P002	Maize	plasma membrane	86.19	85.11
Os04t0457800-01	Rice	plasma membrane	84.76	85.03
KRH35013	Soybean	plasma membrane	84.13	84.94
GSMUA_Achr7P11620_001	Banana	plasma membrane	86.35	84.6
TraesCS6B01G223700.3	Wheat	plasma membrane	84.29	84.55
HORVU6Hr1G049080.7	Barley	plasma membrane	84.29	84.55
KRH70218	Soybean	endoplasmic reticulum	83.65	84.46
Solyc04g072570.2.1	Tomato	extracellular	84.29	84.42
Bra003911.1-P	Field mustard	plasma membrane	76.35	84.24
CDY36679	Canola	plasma membrane	83.02	84.22
TraesCS2A01G343100.1	Wheat	mitochondrion, plasma membrane	83.49	83.89
TraesCS2B01G340700.1	Wheat	plasma membrane	83.49	83.89
TraesCS2D01G321400.1	Wheat	mitochondrion	83.49	83.89
Zm00001d050868_P004	Maize	plasma membrane	82.86	83.79
AT1G71830.1	Thale cress	plasma membrane	82.86	83.52
CDX96350	Canola	plasma membrane	82.86	83.52
Zm00001d025580_P001	Maize	plasma membrane	82.38	83.44
CDX72833	Canola	plasma membrane	82.38	83.04
EES12285	Sorghum	plasma membrane	81.9	82.96
AT1G34210.1	Thale cress	plasma membrane	82.54	82.8
PGSC0003DMT400032797	Potato	cytosol, plasma membrane, plastid	67.14	81.66
PGSC0003DMT400045607	Potato	cytosol, plasma membrane, plastid	67.78	81.33
KRH10503	Soybean	cytosol, plastid	60.32	81.2
PGSC0003DMT400070819	Potato	plasma membrane	81.43	80.91
Bra037006.1-P	Field mustard	mitochondrion	60.95	80.17
HORVU7Hr1G068990.2	Barley	mitochondrion	85.56	79.97
Solyc01g104970.2.1	Tomato	plasma membrane	77.94	79.71
Bra016112.1-P	Field mustard	plasma membrane	76.67	79.57
Solyc10g047140.1.1	Tomato	plasma membrane	77.62	79.51
VIT_12s0055g01160.t01	Wine grape	plasma membrane	75.56	78.03
CDY46116	Canola	plasma membrane	74.13	77.45
Zm00001d049480_P005	Maize	plasma membrane	80.79	77.24
Bra011439.1-P	Field mustard	plasma membrane	63.65	77.12
CDX72403	Canola	plasma membrane	73.81	77.11
Bra034562.1-P	Field mustard	plasma membrane	69.21	77.03
CDY45042	Canola	plasma membrane	74.76	76.96
KRH43924	Soybean	plasma membrane	75.24	76.95
CDX68975	Canola	plasma membrane	74.92	76.75
CDX75351	Canola	plasma membrane	74.92	76.62
GSMUA_Achr10P...	Banana	mitochondrion	88.1	76.55
VIT_12s0055g01280.t01	Wine grape	plasma membrane	62.06	76.22
HORVU2Hr1G080020.6	Barley	cytosol	83.33	74.15
AT2G13790.1	Thale cress	plasma membrane	72.06	73.23
AT4G33430.2	Thale cress	plasma membrane	76.19	72.51
KRH58311	Soybean	plasma membrane	71.27	72.3
CDX68299	Canola	plasma membrane	80.16	71.23
CDY28301	Canola	plasma membrane	44.44	70.53
CDX89615	Canola	plasma membrane	68.25	70.49
CDX93126	Canola	plasma membrane	68.1	70.33
Bra032128.1-P	Field mustard	cytosol	54.29	70.23
Bra041056.1-P	Field mustard	plasma membrane	57.62	70.21
CDY48450	Canola	plasma membrane	68.1	70.1
AT2G13800.3	Thale cress	plasma membrane	65.87	69.05
VIT_12s0055g01150.t01	Wine grape	plasma membrane	65.08	67.43
CDX71165	Canola	plasma membrane	65.56	66.83
Bra032125.1-P	Field mustard	plasma membrane	56.83	66.67
KRH42193	Soybean	plasma membrane	64.6	66.07
KRH58312	Soybean	plasma membrane	63.33	64.88
CDY39690	Canola	cytosol	62.06	64.42
Bra013136.1-P	Field mustard	plasma membrane	55.08	60.03
Os06t0225300-01	Rice	plasma membrane	58.57	59.9
GSMUA_Achr8P23480_001	Banana	plasma membrane	52.86	55.22
GSMUA_Achr6P08840_001	Banana	plasma membrane	51.9	53.87
GSMUA_Achr3P28140_001	Banana	plasma membrane	52.38	53.66
GSMUA_Achr2P23200_001	Banana	plasma membrane	53.97	53.63
VIT_12s0121g00310.t01	Wine grape	cytosol, mitochondrion	24.13	51.18
GSMUA_Achr9P19160_001	Banana	plasma membrane	49.21	49.76
GSMUA_Achr3P06260_001	Banana	plasma membrane	53.02	48.62
GSMUA_Achr9P13420_001	Banana	golgi, plasma membrane, vacuole	49.68	48.53
GSMUA_Achr9P14620_001	Banana	plasma membrane	53.81	48.36
GSMUA_Achr1P16110_001	Banana	plasma membrane	50.95	47.7
GSMUA_Achr3P04810_001	Banana	plasma membrane	48.57	47.37
GSMUA_Achr1P09620_001	Banana	plasma membrane	52.54	47.22
GSMUA_Achr6P00440_001	Banana	plasma membrane	44.76	47.0
GSMUA_Achr7P06010_001	Banana	plasma membrane	52.22	45.5
GSMUA_Achr2P22230_001	Banana	plasma membrane	49.52	43.09
GSMUA_Achr4P22330_001	Banana	plastid	31.27	35.43
GSMUA_Achr10P...	Banana	golgi, vacuole	19.52	35.04
GSMUA_Achr3P04890_001	Banana	plasma membrane	31.75	33.73
GSMUA_Achr4P02060_001	Banana	cytosol	26.35	33.47
GSMUA_Achr5P15040_001	Banana	plasma membrane	32.22	33.12
GSMUA_Achr5P16740_001	Banana	golgi, mitochondrion, plasma membrane, plastid	20.16	29.74

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
MapMan:11.3.2.1.2	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005102	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSMUA_AchrUn_randomG21310_001	EnsemblPlants:GSMUA_AchrUn_randomP21310_001	EnsemblPlants:GSMUA_AchrUn_randomT21310_001
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	UniProt:M0UB39	PFAM:PF00069	PFAM:PF00560	PFAM:PF08263	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF494	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
InterPro:SERK	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0002951B37	SEG:seg	:	:	:

Description

Somatic embryogenesis receptor kinase 1 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG21310_001]

Coordinates

chrchrUn_random:+:104116637..104129186

Molecular Weight (calculated)

69436.4 Da

IEP (calculated)

5.538

GRAVY (calculated)

-0.157

Length

630 amino acids

Sequence
(BLAST)

001: MAAAGLQLVA QWLLWLVLGL SSPLARVVAN VEGDALHTLK TYLNDPNGVL QSWDPTLVNP CTWFHVTCNN DNSVIRVDLG NANLSGNLVP QIGLLKNLQY
101: LEIYSNNISG TIPSELGNLT NLVSLDLYLN NFTGEIPDSL GKLTKLRFLR LNNNTLLGLI PTSLTNITTL QVLDLSNNNL SGEVPSTGSF QLFTPISFAN
201: NPYLCGPGTT KSCPGSPPLP PPPPFVPPTA PTLRESNASS TGAIAGGVAA GAALLFAAPA IGFAWWRRRK PQEHFFDVPA EEDPEVHLGQ LKRFSLRELQ
301: VATDNFSNKN ILGRGGFGKV YKGRLTDGSL VAVKRLKEER TPGGELQFQT EVEMISMAVH RNLLRLRGFC MTPTERLLVY PYMANGSVAS RLRERPPSEP
401: PLDWPTRQRI ALGSARGLSY LHDHCDPKII HRDVKAANIL LDEEFEAVVG DFGLAKLMDY KDTHVTTAVR GTIGHIAPEY LSTGKSSEKT DVFGYGIMLL
501: ELITGQRAFD LARLANDDDV MLLDWVKGLL KEKKLEMLID PDLQNNYVGS EVESLIQVAL LCTQGSPMER PKMSEVVRML EGDGLAERWD EWQRVEVVQH
601: EAEFVPRNRA SDWILDSTDN LRAVELSGPR

Best Arabidopsis Sequence Match ( AT1G71830.1 )
(BLAST)

001: MESSYVVFIL LSLILLPNHS LWLASANLEG DALHTLRVTL VDPNNVLQSW DPTLVNPCTW FHVTCNNENS VIRVDLGNAE LSGHLVPELG VLKNLQYLEL
101: YSNNITGPIP SNLGNLTNLV SLDLYLNSFS GPIPESLGKL SKLRFLRLNN NSLTGSIPMS LTNITTLQVL DLSNNRLSGS VPDNGSFSLF TPISFANNLD
201: LCGPVTSHPC PGSPPFSPPP PFIQPPPVST PSGYGITGAI AGGVAAGAAL LFAAPAIAFA WWRRRKPLDI FFDVPAEEDP EVHLGQLKRF SLRELQVASD
301: GFSNKNILGR GGFGKVYKGR LADGTLVAVK RLKEERTPGG ELQFQTEVEM ISMAVHRNLL RLRGFCMTPT ERLLVYPYMA NGSVASCLRE RPPSQPPLDW
401: PTRKRIALGS ARGLSYLHDH CDPKIIHRDV KAANILLDEE FEAVVGDFGL AKLMDYKDTH VTTAVRGTIG HIAPEYLSTG KSSEKTDVFG YGIMLLELIT
501: GQRAFDLARL ANDDDVMLLD WVKGLLKEKK LEMLVDPDLQ TNYEERELEQ VIQVALLCTQ GSPMERPKMS EVVRMLEGDG LAEKWDEWQK VEILREEIDL
601: SPNPNSDWIL DSTYNLHAVE LSGPR

Arabidopsis Description

SERK1SERK1 [Source:UniProtKB/TrEMBL;Acc:A0A178W829]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.