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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 6
  • golgi 3
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, secretory
BaCelLo:secretory
iPSORT:mitochondrion
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
EER95525
EES03532
EES07030
EES09539
EES12285
EES14176
EES19530
KXG24562
KXG33866
KXG40206
OQU86764
OQU93218

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G34210.1 EES09539 AT5G48380.1 19616764
AT1G34210.1 EES19530 AT5G48380.1 19616764
AT1G34210.1 KXG33866 AT5G48380.1 19616764
AT1G71830.1 EES07030 AT1G71830.1 11397085
AT1G71830.1 EES12285 AT1G71830.1 11397085
AT1G71830.1 KXG24562 AT1G71830.1 11397085
AT1G71830.1 EES07030 AT1G71830.1 16621602
AT1G71830.1 EES12285 AT1G71830.1 16621602
AT1G71830.1 KXG24562 AT1G71830.1 16621602
AT1G71830.1 EES14176 AT2G33500.1 16473966
AT1G71830.1 EER95525 AT3G09840.1 15592873
AT1G71830.1 KXG40206 AT3G09840.1 15592873
AT1G71830.1 EER95525 AT3G09840.1 16473966
AT1G71830.1 KXG40206 AT3G09840.1 16473966
AT1G71830.1 EER95525 AT3G09840.1 16621602
AT1G71830.1 KXG40206 AT3G09840.1 16621602
AT1G71830.1 EER95525 AT3G09840.1 17693538
AT1G71830.1 KXG40206 AT3G09840.1 17693538
AT1G71830.1 OQU93218 AT3G54840.1 16621602
AT1G71830.1 EES03532 AT4G39400.1 16473966
AT1G71830.1 OQU86764 AT4G39400.1 16473966
AT2G13790.1 EES03532 AT4G39400.1 17600708
AT2G13790.1 OQU86764 AT4G39400.1 17600708
AT2G13790.1 EES09539 AT5G48380.1 19616764
AT2G13790.1 EES19530 AT5G48380.1 19616764
AT2G13790.1 KXG33866 AT5G48380.1 19616764
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d024430_P002 Maize plasma membrane 97.62 96.55
Os08t0174700-01 Rice plasma membrane 93.19 94.23
TraesCS7A01G293300.3 Wheat plasma membrane 91.76 93.09
TraesCS7B01G182300.1 Wheat plasma membrane 91.6 92.93
TraesCS7D01G291200.3 Wheat plasma membrane 91.44 92.91
GSMUA_Achr7P17210_001 Banana cytosol 68.94 88.24
Zm00001d049480_P005 Maize plasma membrane 92.08 88.16
GSMUA_Achr2P14850_001 Banana plastid 85.74 86.56
VIT_07s0031g01410.t01 Wine grape plasma membrane 85.58 86.54
KRG91762 Soybean plasma membrane 85.1 86.06
HORVU7Hr1G068990.2 Barley mitochondrion 91.92 86.05
EES07030 Sorghum plasma membrane 85.26 85.94
VIT_18s0164g00070.t01 Wine grape plasma membrane 84.94 85.9
KRH35013 Soybean plasma membrane 84.79 85.74
GSMUA_AchrUn_... Banana plasma membrane 85.58 85.71
KRH70218 Soybean endoplasmic reticulum 83.99 84.94
GSMUA_Achr7P11620_001 Banana plasma membrane 86.53 84.91
GSMUA_Achr10P... Banana plasma membrane 84.15 84.82
Solyc04g072570.2.1 Tomato extracellular 84.47 84.74
EES12285 Sorghum plasma membrane 83.52 84.73
AT1G34210.1 Thale cress plasma membrane 83.2 83.6
CDY36679 Canola plasma membrane 81.78 83.09
Bra003911.1-P Field mustard plasma membrane 75.12 83.01
CDX96350 Canola plasma membrane 81.78 82.56
AT1G71830.1 Thale cress plasma membrane 81.62 82.4
CDX72833 Canola plasma membrane 81.3 82.08
PGSC0003DMT400032797 Potato cytosol, plasma membrane, plastid 67.19 81.85
Bra037006.1-P Field mustard mitochondrion 61.97 81.63
PGSC0003DMT400045607 Potato cytosol, plasma membrane, plastid 67.83 81.52
KRH10503 Soybean cytosol, plastid 60.38 81.41
PGSC0003DMT400070819 Potato plasma membrane 81.62 81.23
Solyc01g104970.2.1 Tomato plasma membrane 77.81 79.71
Solyc10g047140.1.1 Tomato plasma membrane 77.65 79.67
CDY46116 Canola plasma membrane 75.12 78.61
CDX72403 Canola plasma membrane 75.12 78.61
KRH43924 Soybean plasma membrane 76.7 78.57
Bra016112.1-P Field mustard plasma membrane 75.44 78.42
CDY45042 Canola plasma membrane 75.91 78.27
Bra034562.1-P Field mustard plasma membrane 70.05 78.09
CDX68975 Canola plasma membrane 76.07 78.05
VIT_12s0055g01160.t01 Wine grape plasma membrane 75.44 78.03
CDX75351 Canola plasma membrane 76.07 77.92
Bra011439.1-P Field mustard plasma membrane 64.18 77.88
GSMUA_Achr10P... Banana mitochondrion 88.43 76.97
VIT_12s0055g01280.t01 Wine grape plasma membrane 61.33 75.44
KRH58311 Soybean plasma membrane 72.11 73.27
AT4G33430.2 Thale cress plasma membrane 76.86 73.26
AT2G13790.1 Thale cress plasma membrane 71.95 73.23
CDY28301 Canola plasma membrane 45.8 72.8
Bra032128.1-P Field mustard cytosol 55.47 71.87
CDX89615 Canola plasma membrane 68.3 70.66
CDX68299 Canola plasma membrane 79.24 70.52
CDX93126 Canola plasma membrane 68.15 70.49
AT2G13800.3 Thale cress plasma membrane 66.56 69.88
Bra041056.1-P Field mustard plasma membrane 57.21 69.83
CDY48450 Canola plasma membrane 67.67 69.77
Bra032125.1-P Field mustard plasma membrane 57.69 67.78
VIT_12s0055g01150.t01 Wine grape plasma membrane 65.29 67.76
CDX71165 Canola plasma membrane 65.29 66.67
CDY39690 Canola cytosol 63.39 65.9
KRH42193 Soybean plasma membrane 64.03 65.58
KRH58312 Soybean plasma membrane 63.07 64.72
Bra013136.1-P Field mustard plasma membrane 54.36 59.34
OQU91137 Sorghum plasma membrane 42.31 56.09
VIT_12s0121g00310.t01 Wine grape cytosol, mitochondrion 25.2 53.54
EER88222 Sorghum plasma membrane 52.93 53.1
EES05592 Sorghum plasma membrane 51.19 51.6
EES02381 Sorghum golgi, plasma membrane, vacuole 51.66 51.42
EES04934 Sorghum plasma membrane 49.76 50.4
EES10085 Sorghum plasma membrane 46.75 47.66
EES06565 Sorghum plasma membrane 46.75 47.05
KXG25244 Sorghum plastid 50.24 43.01
KXG21439 Sorghum golgi, mitochondrion, plasma membrane 42.16 42.16
EES02154 Sorghum golgi, plasma membrane 19.65 34.07
EER95121 Sorghum plasma membrane 32.01 34.06
EES17498 Sorghum plasma membrane 32.01 32.27
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:11.3.2.1.2MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:8080895UniProt:A0A1B6PFV2
GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005102
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0005623GO:GO:0005886
GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152
GO:GO:0009719GO:GO:0009729GO:GO:0009742GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538GO:GO:0042803InterPro:IPR000719
InterPro:IPR001611InterPro:IPR032675EnsemblPlants:KXG24562ProteinID:KXG24562ProteinID:KXG24562.1InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptPFAM:PF00069PFAM:PF00560PFAM:PF08263
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF494InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSInterPro:SERKSMART:SM00220EnsemblPlantsGene:SORBI_3007G059600SUPFAM:SSF52058SUPFAM:SSF56112
unigene:Sbi.19415InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI00081AE95ESEG:seg
Description
hypothetical protein
Coordinates
chr7:+:6233483..6239958
Molecular Weight (calculated)
69448.1 Da
IEP (calculated)
6.289
GRAVY (calculated)
-0.208
Length
631 amino acids
Sequence
(BLAST)
001: MAAAEASRRR RWALWALLLL RLLHPAALVL ANTEGDALHS LRTNLNDPNN VLQSWDPTLV NPCTWFHVTC NNDNSVIRVD LGNAALSGTL VPQLGQLKNL
101: QYLELYSNNI SGIIPSELGN LTNLVSLDLY LNNFTGSIPD SLGKLLKLRF LRLNNNSLTG SIPKSLTAIT ALQVLDLSNN NLSGEVPSTG SFSLFTPISF
201: ANNPNLCGPG TTKPCPGAPP FSPPPPYNPT TPAQSPGSSS SSTGAIAGGV AAGAALLFAI PAIGFAYWRR RKPQEHFFDV PAEEDPEVHL GQLKRFSLRE
301: LQVATDGFSN KNILGRGGFG KVYKGRLADG SLVAVKRLKE ERTPGGELQF QTEVEMISMA VHRNLLRLRG FCMTPTERLL VYPYMANGSV ASRLRDRPPA
401: EPPLDWQTRR RIALGSARGL SYLHDHCDPK IIHRDVKAAN ILLDEDFEAV VGDFGLAKLM DYKDTHVTTA VRGTIGHIAP EYLSTGKSSE KTDVFGYGIT
501: LLELITGQRA FDLARLANDD DVMLLDWVKG LLKEKKLESL VDLDLEHTYI DVEVESLIQV ALLCTQSNPS ERPKMSEVVR MLEGDGLAER WEEWQKVEVV
601: RQEVELGPHR TSEWILDSTD NLHAEQLSGP R
Best Arabidopsis Sequence Match ( AT1G34210.2 )
(BLAST)
001: MGRKKFEAFG FVCLISLLLL FNSLWLASSN MEGDALHSLR ANLVDPNNVL QSWDPTLVNP CTWFHVTCNN ENSVIRVDLG NADLSGQLVP QLGQLKNLQY
101: LELYSNNITG PVPSDLGNLT NLVSLDLYLN SFTGPIPDSL GKLFKLRFLR LNNNSLTGPI PMSLTNIMTL QVLDLSNNRL SGSVPDNGSF SLFTPISFAN
201: NLDLCGPVTS RPCPGSPPFS PPPPFIPPPI VPTPGGYSAT GAIAGGVAAG AALLFAAPAL AFAWWRRRKP QEFFFDVPAE EDPEVHLGQL KRFSLRELQV
301: ATDSFSNKNI LGRGGFGKVY KGRLADGTLV AVKRLKEERT PGGELQFQTE VEMISMAVHR NLLRLRGFCM TPTERLLVYP YMANGSVASC LRERPPSQLP
401: LAWSIRQQIA LGSARGLSYL HDHCDPKIIH RDVKAANILL DEEFEAVVGD FGLARLMDYK DTHVTTAVRG TIGHIAPEYL STGKSSEKTD VFGYGIMLLE
501: LITGQRAFDL ARLANDDDVM LLDWVKGLLK EKKLEMLVDP DLQSNYTEAE VEQLIQVALL CTQSSPMERP KMSEVVRMLE GDGLAEKWDE WQKVEVLRQE
601: VELSSHPTSD WILDSTDNLH AMELSGPR
Arabidopsis Description
SERK2Somatic embryogenesis receptor kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIC7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.