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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 5
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d041215_P002 Maize plasma membrane 93.45 92.56
Os12t0638100-01 Rice plasma membrane 88.5 88.22
TraesCS5B01G004300.1 Wheat plasma membrane 85.46 86.85
TraesCS5A01G005300.1 Wheat plasma membrane 85.3 86.55
TraesCS5D01G007200.1 Wheat plasma membrane 85.3 86.27
Zm00001d031211_P002 Maize plasma membrane 91.85 83.82
GSMUA_Achr4P22330_001 Banana plastid 68.21 76.8
GSMUA_Achr5P15040_001 Banana plasma membrane 69.65 71.13
VIT_17s0000g05570.t01 Wine grape plasma membrane 62.14 64.62
HORVU5Hr1G000980.2 Barley plastid 68.53 63.84
Solyc03g113450.2.1 Tomato plasma membrane 60.7 63.23
PGSC0003DMT400065173 Potato plasma membrane 60.38 62.9
AT5G62710.1 Thale cress plasma membrane 60.22 62.42
Bra010115.1-P Field mustard plasma membrane 57.99 62.16
CDY00321 Canola plasma membrane 57.99 62.16
CDX84346 Canola plasma membrane 57.83 61.99
CDY16762 Canola plasma membrane 59.11 61.46
KRH56966 Soybean plasma membrane 57.51 61.43
CDX87267 Canola plasma membrane 58.95 61.4
Bra035884.1-P Field mustard plasma membrane 58.79 61.13
KRH63411 Soybean plasma membrane 56.55 61.03
KRH03414 Soybean plasma membrane 58.31 60.53
KRH54498 Soybean plasma membrane 58.31 60.43
EER95121 Sorghum plasma membrane 45.21 47.72
EES02154 Sorghum golgi, plasma membrane 24.76 42.58
OQU91137 Sorghum plasma membrane 26.04 34.24
EES05592 Sorghum plasma membrane 32.27 32.27
KXG24562 Sorghum plasma membrane 32.27 32.01
EES12285 Sorghum plasma membrane 31.79 31.99
EES07030 Sorghum plasma membrane 31.95 31.95
EES10085 Sorghum plasma membrane 31.47 31.83
EER88222 Sorghum plasma membrane 31.63 31.48
EES02381 Sorghum golgi, plasma membrane, vacuole 31.31 30.91
EES04934 Sorghum plasma membrane 30.67 30.82
EES06565 Sorghum plasma membrane 30.51 30.46
KXG21439 Sorghum golgi, mitochondrion, plasma membrane 28.43 28.21
KXG25244 Sorghum plastid 28.91 24.56
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.13.1Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:8072346UniProt:C5YT18
ncoils:CoilEnsemblPlants:EES17498ProteinID:EES17498ProteinID:EES17498.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538
InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sf
InterPro:Leu-rich_rptPFAM:PF00069PFAM:PF00560PFAM:PF08263ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR44289PANTHER:PTHR44289:SF2InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
EnsemblPlantsGene:SORBI_3008G190000SUPFAM:SSF52058SUPFAM:SSF56112unigene:Sbi.11962InterPro:Ser/Thr_kinase_ASTMHMM:TMhelix
UniParc:UPI0001A88BA1RefSeq:XP_002443660.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr8:-:62397559..62401674
Molecular Weight (calculated)
68339.6 Da
IEP (calculated)
5.616
GRAVY (calculated)
0.060
Length
626 amino acids
Sequence
(BLAST)
001: MTRREREKPT TAAASASDSA MDKIAATAFA LLLCLCFSST PAAMALTPDG EALLELKLAF NATVQRLTSW RPSDPNPCGW EGISCSVPDL RVQSINLPYM
101: QLGGIISPSI GRLDKLQRLA LHQNSLHGPI PAEIKNCTEL RAIYLRANYL QGGIPSEIGE LLHLTILDLS SNLLRGTIPA SIGSLTHLRF LNLSTNFFSG
201: EIPNVGVLGT FKSSSFVGNL ELCGLSIQKA CRGTLGFPAV LPHSDPLSSA GVSPINNNKT SHFLNGIVIG SMSTLALALI AVLGFLWVCL LSRKKSIGGN
301: YVKMDKQTVP DGAKLVTYQW NLPYSSSEII RRLELLDEED VVGCGGFGTV YKMVMDDGTS FAVKRIDLSR ESRDRTFEKE LEILGSIRHI NLVNLRGYCR
401: LATAKLLIYD FVELGSLDCY LHGDEQEDQP LNWNARMKIA LGSARGLAYL HHDCSPGIVH RDIKASNILL DRSLEPRVSD FGLARLLVDN AAHVTTVVAG
501: TFGYLAPEYL QNGHATEKSD VYSFGVLLLE LVTGKRPTDS CFIKKGLNIV GWLNTLTGEH RLEDIIDEQC GDVEVEAVEA ILDIAAMCTD ADPGQRPSMS
601: AVLKMLEEEI LSPCMSELCY EQHLEL
Best Arabidopsis Sequence Match ( AT5G62710.1 )
(BLAST)
001: MGISNWVFSV ISVATLFVSC SFALTLDGFA LLELKSGFND TRNSLENWKD SDESPCSWTG VSCNPQDQRV VSINLPYMQL GGIISPSIGK LSRLQRLALH
101: QNSLHGNIPN EITNCTELRA MYLRANFLQG GIPPDLGNLT FLTILDLSSN TLKGAIPSSI SRLTRLRSLN LSTNFFSGEI PDIGVLSRFG VETFTGNLDL
201: CGRQIRKPCR SSMGFPVVLP HAESADESDS PKRSSRLIKG ILIGAMSTMA LAFIVIFVFL WIWMLSKKER KVKKYTEVKK QKDPSETSKK LITFHGDLPY
301: SSTELIEKLE SLDEEDIVGS GGFGTVYRMV MNDLGTFAVK KIDRSRQGSD RVFEREVEIL GSVKHINLVN LRGYCRLPSS RLLIYDYLTL GSLDDLLHER
401: AQEDGLLNWN ARLKIALGSA RGLAYLHHDC SPKIVHRDIK SSNILLNDKL EPRVSDFGLA KLLVDEDAHV TTVVAGTFGY LAPEYLQNGR ATEKSDVYSF
501: GVLLLELVTG KRPTDPIFVK RGLNVVGWMN TVLKENRLED VIDKRCTDVD EESVEALLEI AERCTDANPE NRPAMNQVAQ LLEQEVMSPS SGIDYYDDSH
601: SDYC
Arabidopsis Description
Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q8GX94]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.