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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 4
  • mitochondrion 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:plasma membrane
PProwler:secretory
TargetP:plastid
WoLF PSORT:plasma membrane
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os08t0442700-01 Rice plasma membrane 78.02 84.81
TraesCS7B01G324500.1 Wheat plasma membrane 72.73 82.97
TraesCS7D01G416400.1 Wheat plasma membrane 72.86 82.87
TraesCS7A01G425500.1 Wheat plasma membrane 72.86 82.24
Zm00001d032142_P004 Maize plasma membrane 88.33 78.15
HORVU7Hr1G097930.4 Barley plasma membrane, plastid 73.68 76.59
GSMUA_Achr9P13420_001 Banana golgi, plasma membrane, vacuole 62.01 70.85
GSMUA_Achr3P04810_001 Banana plasma membrane 59.29 67.65
CDY28194 Canola cytosol 27.14 64.94
VIT_11s0037g00960.t01 Wine grape plasma membrane 54.55 62.81
Bra024069.1-P Field mustard plasma membrane 54.14 62.74
Solyc07g006110.2.1 Tomato plasma membrane 53.46 62.44
KRH02989 Soybean plasma membrane 54.27 62.11
CDX72249 Canola plasma membrane 53.6 62.01
Bra032133.1-P Field mustard plasma membrane 53.6 62.01
KRH72362 Soybean plasma membrane 53.6 61.91
CDY39685 Canola plasma membrane 53.46 61.85
CDY65182 Canola plasma membrane 53.46 61.85
AT2G23950.1 Thale cress plasma membrane 53.19 61.83
EES05592 Sorghum plasma membrane 52.51 61.82
PGSC0003DMT400028991 Potato plasma membrane 52.92 61.81
AT4G30520.1 Thale cress plasma membrane 53.87 61.27
EER88222 Sorghum plasma membrane 51.7 60.57
CDY39211 Canola plasma membrane 47.08 59.93
CDX68670 Canola plasma membrane 45.59 56.0
EES02381 Sorghum golgi, plasma membrane, vacuole 47.9 55.68
OQU91137 Sorghum plasma membrane 32.84 50.84
EES07030 Sorghum plasma membrane 42.88 50.48
KXG24562 Sorghum plasma membrane 43.01 50.24
EES06565 Sorghum plasma membrane 42.47 49.92
EES12285 Sorghum plasma membrane 42.06 49.84
Bra011200.1-P Field mustard plastid 35.41 48.69
KXG21439 Sorghum golgi, mitochondrion, plasma membrane 38.94 45.48
EES04934 Sorghum plasma membrane 37.72 44.62
EES10085 Sorghum plasma membrane 36.77 43.78
EES02154 Sorghum golgi, plasma membrane 17.64 35.71
CDY00320 Canola endoplasmic reticulum 0.81 35.29
EER95121 Sorghum plasma membrane 24.69 30.69
CDY67608 Canola cytosol, mitochondrion, nucleus 3.26 30.0
CDX68667 Canola cytosol, mitochondrion, nucleus 3.26 30.0
EES17498 Sorghum plasma membrane 24.56 28.91
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10UniProt:A0A1B6PHS9GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005515
GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0019538InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675EnsemblPlants:KXG25244ProteinID:KXG25244
ProteinID:KXG25244.1InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptPFAM:PF07714
PFAM:PF08263PFAM:PF13855PRINTS:PR00019ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011
PANTHER:PTHR27001PANTHER:PTHR27001:SF217InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220EnsemblPlantsGene:SORBI_3007G142900
SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser-Thr/Tyr_kinase_cat_domInterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI00081AE808
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr7:-:57288534..57294494
Molecular Weight (calculated)
78509.3 Da
IEP (calculated)
8.158
GRAVY (calculated)
-0.096
Length
737 amino acids
Sequence
(BLAST)
001: MTREKAKPKA PPLRSTLCPA ACRPCPPSSR FSFSSSPPGA LLSQTRTHHS DIPLPEPALP MASTSGQLLC LPAAAAVVLL FISSAPLVAL ASEPLNPEVQ
101: ALIAIRQGLV DPHGVLRSWD QDSVDPCSWA MITCSAQNLV IGLGVPSQGL SGTLSGRIAN LTHLEQVLLQ NNNITGRLPP ELGALPRLQT LDLSNNRFSG
201: RVPDTLGRIT TLRYLRLNNN SLSGPFPASL AKIPQLSFLD LSYNNLTGPV PLFPTRTFNI VGNPMICGSN AGAGECAAAL PPATVPFPLD STPGGSRTTG
301: AAAAGRSKAG AARLPIGVGT SLGASSLVLF AVSCFLWRRK RRHTGGPSSV LGIHERGGYD LEDGGGGGGV VARLGNVRQF GLRELQAATD GFSAKNILGK
401: GGFGNVYRGR LPDGTTVAVK RLKDPSASGE AQFRTEVEMI SLAVHRHLLR LVGFCAASGE RLLVYPYMPN GSVASRLRGK PALDWATRKR IAVGAARGLL
501: YLHEQCDPKI IHRDVKAANV LLDEHHEAVV GDFGLAKLLD HGDSHVTTAV RGTVGHIAPE YLSTGQSSEK TDVFGFGILL LELVTGQRAL ELGKASGALH
601: SQKGVVMLDW VRKVHQEKML DLLVDHDLGP HYDRIEVAEV VQVALLCTQF QPSHRPKMSE VVRMLEGDGL AEKWEATNRP AAGTGPPCHV DALGYDHRND
701: SNGSVFFNDF HDNESSLSSD EARSIDMVEE MELSGPR
Best Arabidopsis Sequence Match ( AT2G23950.1 )
(BLAST)
001: MVVMKLITMK IFSVLLLLCF FVTCSLSSEP RNPEVEALIN IKNELHDPHG VFKNWDEFSV DPCSWTMISC SSDNLVIGLG APSQSLSGTL SGSIGNLTNL
101: RQVSLQNNNI SGKIPPEICS LPKLQTLDLS NNRFSGEIPG SVNQLSNLQY LRLNNNSLSG PFPASLSQIP HLSFLDLSYN NLRGPVPKFP ARTFNVAGNP
201: LICKNSLPEI CSGSISASPL SVSLRSSSGR RTNILAVALG VSLGFAVSVI LSLGFIWYRK KQRRLTMLRI SDKQEEGLLG LGNLRSFTFR ELHVATDGFS
301: SKSILGAGGF GNVYRGKFGD GTVVAVKRLK DVNGTSGNSQ FRTELEMISL AVHRNLLRLI GYCASSSERL LVYPYMSNGS VASRLKAKPA LDWNTRKKIA
401: IGAARGLFYL HEQCDPKIIH RDVKAANILL DEYFEAVVGD FGLAKLLNHE DSHVTTAVRG TVGHIAPEYL STGQSSEKTD VFGFGILLLE LITGMRALEF
501: GKSVSQKGAM LEWVRKLHKE MKVEELVDRE LGTTYDRIEV GEMLQVALLC TQFLPAHRPK MSEVVQMLEG DGLAERWAAS HDHSHFYHAN MSYRTITSTD
601: GNNQTKHLFG SSGFEDEDDN QALDSFAMEL SGPR
Arabidopsis Description
Probable LRR receptor-like serine/threonine-protein kinase At2g23950 [Source:UniProtKB/Swiss-Prot;Acc:Q0WVM4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.