CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 4
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008724_P007	Maize	plasma membrane	93.22	93.81
Os01t0171000-01	Rice	plasma membrane	91.32	92.2
Zm00001d039678_P002	Maize	plasma membrane	95.74	91.69
HORVU6Hr1G074570.6	Barley	cytosol	51.26	90.28
TraesCS3B01G106100.1	Wheat	plasma membrane	89.75	90.03
HORVU4Hr1G029640.2	Barley	cytosol	35.33	89.96
TraesCS3D01G091000.2	Wheat	plasma membrane	89.91	89.91
HORVU3Hr1G016240.5	Barley	plasma membrane	89.27	89.27
TraesCS3A01G091100.1	Wheat	plasma membrane	80.6	79.35
GSMUA_Achr2P23200_001	Banana	plasma membrane	76.81	76.81
GSMUA_Achr6P08840_001	Banana	plasma membrane	72.87	76.11
VIT_01s0127g00230.t01	Wine grape	plasma membrane	74.45	75.4
HORVU6Hr1G093140.1	Barley	mitochondrion, plastid	32.33	75.09
PGSC0003DMT400019924	Potato	cytosol	71.14	74.3
HORVU7Hr1G083870.7	Barley	cytosol	23.82	73.66
KRH74566	Soybean	plasma membrane	71.92	73.19
KRH69595	Soybean	plasma membrane	71.77	72.92
Solyc04g039730.2.1	Tomato	plasma membrane	71.14	72.39
PGSC0003DMT400035086	Potato	plasma membrane	66.4	70.17
CDY46185	Canola	golgi, plasma membrane	69.09	68.87
Solyc05g005140.2.1	Tomato	plasma membrane	65.46	68.82
CDY61461	Canola	golgi, plasma membrane	68.77	68.66
Bra031479.1-P	Field mustard	endoplasmic reticulum, plasma membrane	58.83	68.57
AT1G60800.1	Thale cress	plasma membrane	67.98	68.2
CDY61508	Canola	cytosol	53.63	67.06
CDY44608	Canola	cytosol	53.47	66.86
EER88222	Sorghum	plasma membrane	62.78	63.27
EES05592	Sorghum	plasma membrane	62.46	63.26
EES06565	Sorghum	plasma membrane	52.68	53.27
EES12285	Sorghum	plasma membrane	50.95	51.93
KXG24562	Sorghum	plasma membrane	51.42	51.66
EES07030	Sorghum	plasma membrane	50.79	51.44
KXG21439	Sorghum	golgi, mitochondrion, plasma membrane	50.95	51.19
OQU91137	Sorghum	plasma membrane	38.01	50.63
KXG25244	Sorghum	plastid	55.68	47.9
EES04934	Sorghum	plasma membrane	45.27	46.07
EES10085	Sorghum	plasma membrane	42.9	43.94
EES02154	Sorghum	golgi, plasma membrane	19.72	34.34
EER95121	Sorghum	plasma membrane	31.23	33.39
EES17498	Sorghum	plasma membrane	30.91	31.31

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	UniProt:C5XNE5	EnsemblPlants:EES02381
ProteinID:EES02381	ProteinID:EES02381.2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0004674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF49	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
EnsemblPlantsGene:SORBI_3003G051100	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI00081AE1DF	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:4645225..4650634

Molecular Weight (calculated)

69587.7 Da

IEP (calculated)

7.016

GRAVY (calculated)

-0.128

Length

634 amino acids

Sequence
(BLAST)

001: MRARGPRMWM RWWWVAVAAL LAVILPPSNA TLSPAGINYE VVALMAIKTE LEDPYNVLDN WDINSVDPCS WRMVTCSSDG YVSALGLPSQ SLSGKLSPGI
101: GNLTRLQSVL LQNNAISGPI PGTIGKLGML KTLDMSDNQL TGSIPSSLGN LKNLNYLKLN NNSLSGVLPD SLASIDGFAL VDLSFNNLSG PLPKISARTF
201: IIAGNPMICG NKSGGNCSSV SLDPLSYPPD DLKTQPQQGI GKSHHIATIC GATVGSVAFA AVVVGMLLWW RHRRNQQIFF DVNDQYDPEV CLGHLKRYAF
301: KELRASTNNF NSKNILGEGG YGIVYKGYLR DGSVVAVKRL KDYNAVGGEV QFQTEVEVIS LAVHRNLLRL IGFCTTESER LLVYPYMPNG SVASQLREHI
401: NGKPALDWSR RKRIALGTAR GLLYLHEQCD PKIIHRDVKA SNVLLDEYFE AIVGDFGLAK LLDHRESHVT TAVRGTVGHI APEYLSTGQS SEKTDVFGFG
501: VLLVELITGQ KALDFGRVAN QKGGVLDWVK KLHQEKQLNM MVDKDLGSNY DRVELEEMVQ VALLCTQYHP SHRPRMSEVI RMLEGDGLAE KWEASQNVDT
601: PKSVSSEILP PKYMDFAADE SSLGLEAMEL SGPR

Best Arabidopsis Sequence Match ( AT1G60800.1 )
(BLAST)

001: MEGVRFVVWR LGFLVFVWFF DISSATLSPT GVNYEVTALV AVKNELNDPY KVLENWDVNS VDPCSWRMVS CTDGYVSSLD LPSQSLSGTL SPRIGNLTYL
101: QSVVLQNNAI TGPIPETIGR LEKLQSLDLS NNSFTGEIPA SLGELKNLNY LRLNNNSLIG TCPESLSKIE GLTLVDISYN NLSGSLPKVS ARTFKVIGNA
201: LICGPKAVSN CSAVPEPLTL PQDGPDESGT RTNGHHVALA FAASFSAAFF VFFTSGMFLW WRYRRNKQIF FDVNEQYDPE VSLGHLKRYT FKELRSATNH
301: FNSKNILGRG GYGIVYKGHL NDGTLVAVKR LKDCNIAGGE VQFQTEVETI SLALHRNLLR LRGFCSSNQE RILVYPYMPN GSVASRLKDN IRGEPALDWS
401: RRKKIAVGTA RGLVYLHEQC DPKIIHRDVK AANILLDEDF EAVVGDFGLA KLLDHRDSHV TTAVRGTVGH IAPEYLSTGQ SSEKTDVFGF GILLLELITG
501: QKALDFGRSA HQKGVMLDWV KKLHQEGKLK QLIDKDLNDK FDRVELEEIV QVALLCTQFN PSHRPKMSEV MKMLEGDGLA ERWEATQNGT GEHQPPPLPP
601: GMVSSSPRVR YYSDYIQESS LVVEAIELSG PR

Arabidopsis Description

NIK3Protein NSP-INTERACTING KINASE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.