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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 6
  • golgi 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY46185 Canola golgi, plasma membrane 98.43 98.27
Bra031479.1-P Field mustard endoplasmic reticulum, plasma membrane 84.09 98.16
CDY61508 Canola cytosol 74.02 92.7
CDY44608 Canola cytosol 73.86 92.5
AT1G60800.1 Thale cress plasma membrane 91.5 91.93
KRH69595 Soybean plasma membrane 75.59 76.92
KRH74566 Soybean plasma membrane 75.43 76.89
PGSC0003DMT400019924 Potato cytosol 72.91 76.28
VIT_01s0127g00230.t01 Wine grape plasma membrane 73.86 74.92
Solyc04g039730.2.1 Tomato plasma membrane 72.28 73.68
GSMUA_Achr2P23200_001 Banana plasma membrane 71.34 71.45
PGSC0003DMT400035086 Potato plasma membrane 67.09 71.0
GSMUA_Achr6P08840_001 Banana plasma membrane 67.72 70.84
HORVU4Hr1G029640.2 Barley cytosol 27.72 70.68
Solyc05g005140.2.1 Tomato plasma membrane 66.77 70.32
HORVU6Hr1G074570.6 Barley cytosol 39.69 70.0
EES02381 Sorghum golgi, plasma membrane, vacuole 68.66 68.77
Os01t0171000-01 Rice plasma membrane 67.87 68.63
TraesCS3B01G106100.1 Wheat plasma membrane 67.87 68.2
TraesCS3D01G091000.2 Wheat plasma membrane 68.03 68.14
HORVU3Hr1G016240.5 Barley plasma membrane 67.72 67.82
Zm00001d008724_P007 Maize plasma membrane 67.24 67.78
Zm00001d039678_P002 Maize plasma membrane 68.03 65.26
HORVU7Hr1G083870.7 Barley cytosol 20.47 63.41
HORVU6Hr1G093140.1 Barley mitochondrion, plastid 26.3 61.17
CDY28194 Canola cytosol 28.98 59.74
CDX83534 Canola plasma membrane 60.0 59.53
CDY48073 Canola plasma membrane 59.53 59.06
TraesCS3A01G091100.1 Wheat plasma membrane 59.84 59.01
CDX69484 Canola plasma membrane 58.43 58.52
CDY26481 Canola plasma membrane 58.11 57.93
CDY65182 Canola plasma membrane 55.91 55.73
CDX72249 Canola plasma membrane 55.75 55.57
CDY39685 Canola plasma membrane 55.43 55.26
CDY39449 Canola plasma membrane 51.97 53.66
CDX77614 Canola plasma membrane 51.81 53.58
CDY39211 Canola plasma membrane 48.5 53.2
CDY36679 Canola plasma membrane 51.18 52.33
CDX96350 Canola plasma membrane 51.18 52.0
CDX72833 Canola plasma membrane 51.02 51.84
CDX70667 Canola endoplasmic reticulum, golgi 58.11 51.25
CDX78667 Canola golgi, plasma membrane 57.8 50.76
CDX68670 Canola plasma membrane 47.72 50.5
CDX72403 Canola plasma membrane 47.72 50.25
CDY46116 Canola plasma membrane 47.72 50.25
CDX89615 Canola plasma membrane 47.72 49.67
CDX93126 Canola plasma membrane 47.56 49.51
CDX75351 Canola plasma membrane 47.87 49.35
CDY45042 Canola plasma membrane 47.56 49.35
CDX68975 Canola plasma membrane 47.72 49.27
CDY48450 Canola plasma membrane 45.83 47.55
CDY39690 Canola cytosol 45.04 47.12
CDY00320 Canola endoplasmic reticulum 1.26 47.06
CDY55159 Canola extracellular, plasma membrane, vacuole 44.57 46.55
CDY08807 Canola plasma membrane 44.57 46.55
CDX84436 Canola cytosol 42.2 46.29
CDY41531 Canola cytosol 42.2 46.29
CDX71165 Canola plasma membrane 45.04 46.28
CDX85768 Canola plasma membrane 43.46 45.17
CDY40089 Canola plasma membrane 43.46 45.17
CDX68299 Canola plasma membrane 49.76 44.57
CDY28301 Canola plasma membrane 25.04 40.05
CDY00321 Canola plasma membrane 32.13 34.93
CDX88452 Canola plasma membrane, vacuole 18.9 34.19
CDY52435 Canola plasma membrane, vacuole 18.9 34.19
CDX84346 Canola plasma membrane 31.34 34.08
CDY32113 Canola plasma membrane 30.87 33.33
CDY31708 Canola plasma membrane 30.55 33.05
CDY40456 Canola plasma membrane 31.02 33.0
CDY16762 Canola plasma membrane 31.18 32.89
CDX87267 Canola plasma membrane 30.87 32.61
CDX84187 Canola plasma membrane 30.08 32.43
CDX79610 Canola plasma membrane 29.92 31.99
CDX84610 Canola plasma membrane 29.92 31.99
CDY67608 Canola cytosol, mitochondrion, nucleus 3.15 25.0
CDX68667 Canola cytosol, mitochondrion, nucleus 3.15 25.0
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078JAY1UniProt:A0A078JAY1
EnsemblPlants:CDY61461ProteinID:CDY61461ProteinID:CDY61461.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575
GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00033872001
InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sf
InterPro:Leu-rich_rptPFAM:PF00069PFAM:PF08263PFAM:PF13855ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF49InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EDCDD3
SEG:seg:::::
Description
BnaC01g43240DBnaC01g43240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JAY1]
Coordinates
chrLK033998:+:25882..29889
Molecular Weight (calculated)
69959.7 Da
IEP (calculated)
7.081
GRAVY (calculated)
-0.147
Length
635 amino acids
Sequence
(BLAST)
001: MVGARLVFWR LGFLVLVWFP DVTTATLSPT GVNYEVTALV AIKSELNDPY NVLENWDVNS VDPCSWRMVT CTDGYVSALG LPSQSLSGTL SPRIGNLSYL
101: QSVLLQNNAI SGPIPDTIGR LEKLQTLDLS NNSFTGEIPA SLGELNNLNY LRLNNNSLSG TCPQSLSKIE GLTLVDISYN NLSGSLPKVS ARTFKVIGNA
201: LICGPKAAAN NCSAVLPEPL TLPQDVPSDD SGTHTNGHHV AVAFAASFSA AFFVIFTSGM FLWWRYRRNK QIFFDVNEQY DLEVSLGHLK RYTFKELRSA
301: TNHFHPKNIL GRGGYGIVYK GHLSDGSLVA VKRLKDCNIA GGEVQFQTEV ETISLALHRN LLRLRGFCSS NNERILVYPY MPNGSVASRL KDHIRGEPAL
401: DWSRRKKIAV GTARGLVYLH EQCDPKIIHR DVKAANILLD EDFEAVVGDF GLAKLLDHRD SHVTTAVRGT VGHIAPEYLS TGQSSEKTDV FGFGILLLEL
501: ITGQKALDFG RSSHQKGVML DWVKKLHQEG KLKQLIDKDL NDKYDTVELE EIVQVALLCT QFNPSNRPKM SEVMKMLEGD GLADRWEASQ SGGAKSLPPP
601: LPSGMVSSSP RVRYYSDYIQ ESSLVVEAIE LSGPR
Best Arabidopsis Sequence Match ( AT1G60800.1 )
(BLAST)
001: MEGVRFVVWR LGFLVFVWFF DISSATLSPT GVNYEVTALV AVKNELNDPY KVLENWDVNS VDPCSWRMVS CTDGYVSSLD LPSQSLSGTL SPRIGNLTYL
101: QSVVLQNNAI TGPIPETIGR LEKLQSLDLS NNSFTGEIPA SLGELKNLNY LRLNNNSLIG TCPESLSKIE GLTLVDISYN NLSGSLPKVS ARTFKVIGNA
201: LICGPKAVSN CSAVPEPLTL PQDGPDESGT RTNGHHVALA FAASFSAAFF VFFTSGMFLW WRYRRNKQIF FDVNEQYDPE VSLGHLKRYT FKELRSATNH
301: FNSKNILGRG GYGIVYKGHL NDGTLVAVKR LKDCNIAGGE VQFQTEVETI SLALHRNLLR LRGFCSSNQE RILVYPYMPN GSVASRLKDN IRGEPALDWS
401: RRKKIAVGTA RGLVYLHEQC DPKIIHRDVK AANILLDEDF EAVVGDFGLA KLLDHRDSHV TTAVRGTVGH IAPEYLSTGQ SSEKTDVFGF GILLLELITG
501: QKALDFGRSA HQKGVMLDWV KKLHQEGKLK QLIDKDLNDK FDRVELEEIV QVALLCTQFN PSHRPKMSEV MKMLEGDGLA ERWEATQNGT GEHQPPPLPP
601: GMVSSSPRVR YYSDYIQESS LVVEAIELSG PR
Arabidopsis Description
NIK3Protein NSP-INTERACTING KINASE 3 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZS4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.