CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

plastid 1
plasma membrane 4
extracellular 4
endoplasmic reticulum 3
vacuole 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	plastid
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024369.1-P	Field mustard	plasma membrane	91.28	98.75
CDY08807	Canola	plasma membrane	98.68	98.68
VIT_00s0646g00030.t01	Wine grape	cytosol	50.0	87.11
AT5G65240.2	Thale cress	plasma membrane	91.45	86.88
CDX85768	Canola	plasma membrane	83.39	82.98
CDY40089	Canola	plasma membrane	83.22	82.82
VIT_00s0634g00030.t01	Wine grape	cytosol	31.74	82.13
VIT_00s0641g00010.t01	Wine grape	cytosol	48.19	80.72
KRH43169	Soybean	plasma membrane	75.33	75.08
KRH59316	Soybean	plasma membrane	75.16	74.92
Solyc11g008960.1.1	Tomato	plasma membrane	73.85	74.34
PGSC0003DMT400041690	Potato	plasma membrane	73.68	74.17
PGSC0003DMT400056093	Potato	plasma membrane	71.38	71.85
Solyc03g078520.2.1	Tomato	plasma membrane	71.71	71.83
OQU91137	Sorghum	plasma membrane	55.76	71.22
GSMUA_Achr8P23480_001	Banana	plasma membrane	70.07	70.65
TraesCS3D01G299800.1	Wheat	plasma membrane	68.91	69.26
TraesCS3B01G334400.2	Wheat	plasma membrane	68.75	69.21
Os02t0283800-01	Rice	plasma membrane	68.75	68.86
KRG97568	Soybean	plasma membrane	68.26	68.48
VIT_00s0848g00010.t01	Wine grape	plasma membrane, plastid	23.03	67.31
Zm00001d015971_P004	Maize	plasma membrane	67.43	66.34
KRH31305	Soybean	plasma membrane	68.91	66.19
EES04934	Sorghum	plasma membrane	66.45	64.85
TraesCS3A01G302200.1	Wheat	plastid	65.3	61.08
Zm00001d033652_P002	Maize	plasma membrane	68.26	60.85
HORVU3Hr1G073960.5	Barley	plastid	68.59	57.2
CDY41531	Canola	cytosol	53.78	56.48
CDX84436	Canola	cytosol	53.29	55.96
CDY28194	Canola	cytosol	27.8	54.87
CDX72403	Canola	plasma membrane	51.48	51.91
CDY46116	Canola	plasma membrane	51.32	51.74
CDY36679	Canola	plasma membrane	52.63	51.53
CDX96350	Canola	plasma membrane	52.63	51.2
CDX72833	Canola	plasma membrane	52.47	51.04
CDX93126	Canola	plasma membrane	50.99	50.82
CDX75351	Canola	plasma membrane	51.48	50.81
CDX68975	Canola	plasma membrane	51.32	50.73
CDX89615	Canola	plasma membrane	50.82	50.66
CDY45042	Canola	plasma membrane	50.99	50.65
GSMUA_Achr2P22230_001	Banana	plasma membrane	59.54	50.0
CDY48450	Canola	plasma membrane	49.67	49.35
CDX71165	Canola	plasma membrane	48.52	47.73
CDY39690	Canola	cytosol	47.2	47.28
CDY00320	Canola	endoplasmic reticulum	1.32	47.06
CDY61508	Canola	cytosol	38.65	46.35
CDY44608	Canola	cytosol	38.65	46.35
CDY48073	Canola	plasma membrane	48.68	46.25
CDX83534	Canola	plasma membrane	48.52	46.09
CDX69484	Canola	plasma membrane	48.03	46.06
CDY26481	Canola	plasma membrane	47.7	45.53
CDY39449	Canola	plasma membrane	45.39	44.88
CDX77614	Canola	plasma membrane	45.23	44.79
CDY46185	Canola	golgi, plasma membrane	46.71	44.65
CDY61461	Canola	golgi, plasma membrane	46.55	44.57
CDX68299	Canola	plasma membrane	51.81	44.43
CDX72249	Canola	plasma membrane	45.72	43.64
CDY39685	Canola	plasma membrane	44.9	42.86
CDY65182	Canola	plasma membrane	44.9	42.86
CDX68670	Canola	plasma membrane	41.94	42.5
CDY39211	Canola	plasma membrane	40.3	42.31
CDY28301	Canola	plasma membrane	26.15	40.05
CDX70667	Canola	endoplasmic reticulum, golgi	46.71	39.44
CDX78667	Canola	golgi, plasma membrane	46.38	39.0
CDX84346	Canola	plasma membrane	32.73	34.08
CDY52435	Canola	plasma membrane, vacuole	19.57	33.9
CDY00321	Canola	plasma membrane	32.4	33.73
CDX88452	Canola	plasma membrane, vacuole	19.41	33.62
CDY32113	Canola	plasma membrane	32.4	33.5
CDY40456	Canola	plasma membrane	32.57	33.17
CDX79610	Canola	plasma membrane	32.4	33.16
CDX84610	Canola	plasma membrane	32.4	33.16
CDX87267	Canola	plasma membrane	32.07	32.45
CDY16762	Canola	plasma membrane	32.07	32.39
CDX84187	Canola	plasma membrane	31.25	32.26
CDY31708	Canola	plasma membrane	31.09	32.2
CDY67608	Canola	cytosol, mitochondrion, nucleus	3.12	23.75
CDX68667	Canola	cytosol, mitochondrion, nucleus	3.12	23.75

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078IUQ0	UniProt:A0A078IUQ0
EnsemblPlants:CDY55159	ProteinID:CDY55159	ProteinID:CDY55159.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00016454001	InterPro:IPR000719
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	PFAM:PF00069	PFAM:PF08263
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF33	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0004EF06FC	SEG:seg	:	:	:

Description

BnaCnng28260DBnaCnng28260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IUQ0]

Coordinates

chrLK033379:-:5821..9651

Molecular Weight (calculated)

67762.9 Da

IEP (calculated)

4.805

GRAVY (calculated)

-0.214

Length

608 amino acids

Sequence
(BLAST)

001: MALPFTITAL ALACLWSSVS PDDQGEALFA LRSSLRASPQ QLSDWNLNQV DPCTWSQVIC DEQKHVTSLT LSDMNFSSGT LSSGIGILKT LKTLTLKGNG
101: ITGEIPESIG NLSSLTSLDL EDNQLSGPIP STLGNLSNIQ FLTLSRNNLN GTVPDSLTGL SKLINILLDS NNLSGEIPQS LFDIPKYNFT ANNLTCGGIY
201: PHPCVTESNP SGDSSNSKTG IIAGVVSGST VILLGFFLFF FCKDKHKGYR REVFVDVAGE VDRRIAFGQL RRFSWRELQL ATDEFSEQNV LGQGGFGKVY
301: KGVLLDGTKV AVKRLTDFER PGGDEAFQRE VEMISVAVHR NLLRLIGFCT TQTERLLVYP FMQNLSVAYR LREIKRGEPV LDWFRRKQIA LGAARGLEYL
401: HEHCNPKIIH RDVKAANVLL DEDFEAVVGD FGLAKLVDVR RTNVTTQVRG TMGHIAPECI STGKSSEKTD VFGYGIMLLE LVTGQRAIDF SRLEEEDDVL
501: LLDHVKKLER EKRLGDIVDK KLEEGYIEEE VEMMIQVALL CTQAAPEERP AMSEVVRMLE GEGLAERWEE WQNLEVTRQE EFQRLQRRFD WGEDSINNQD
601: AIELSGGR

Best Arabidopsis Sequence Match ( AT5G65240.1 )
(BLAST)

001: MALLIITALV FSSLWSSVSP DAQGDALFAL RSSLRASPEQ LSDWNQNQVD PCTWSQVICD DKKHVTSVTL SYMNFSSGTL SSGIGILTTL KTLTLKGNGI
101: MGGIPESIGN LSSLTSLDLE DNHLTDRIPS TLGNLKNLQF LTLSRNNLNG SIPDSLTGLS KLINILLDSN NLSGEIPQSL FKIPKYNFTA NNLSCGGTFP
201: QPCVTESSPS GDSSSRKTGI IAGVVSGIAV ILLGFFFFFF CKDKHKGYKR DVFVDVAGEV DRRIAFGQLR RFAWRELQLA TDEFSEKNVL GQGGFGKVYK
301: GLLSDGTKVA VKRLTDFERP GGDEAFQREV EMISVAVHRN LLRLIGFCTT QTERLLVYPF MQNLSVAYCL REIKPGDPVL DWFRRKQIAL GAARGLEYLH
401: EHCNPKIIHR DVKAANVLLD EDFEAVVGDF GLAKLVDVRR TNVTTQVRGT MGHIAPECIS TGKSSEKTDV FGYGIMLLEL VTGQRAIDFS RLEEEDDVLL
501: LDHVKKLERE KRLEDIVDKK LDEDYIKEEV EMMIQVALLC TQAAPEERPA MSEVVRMLEG EGLAERWEEW QNLEVTRQEE FQRLQRRFDW GEDSINNQDA
601: IELSGGR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4KGL1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.