Factsheet for Zm00001d033652_P002

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
mitochondrion 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 23353019

msms PMID: 23353019 doi

D Hopff, S Wienkoop, S Lüthje

University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU91137	Sorghum	plasma membrane	66.72	95.59
TraesCS3D01G299800.1	Wheat	plasma membrane	80.5	90.74
TraesCS3B01G334400.2	Wheat	plasma membrane	80.35	90.73
VIT_00s0646g00030.t01	Wine grape	cytosol	45.45	88.83
VIT_00s0634g00030.t01	Wine grape	cytosol	29.18	84.68
Zm00001d015971_P004	Maize	plasma membrane	75.22	83.01
VIT_00s0641g00010.t01	Wine grape	cytosol	43.7	82.09
GSMUA_Achr8P23480_001	Banana	plasma membrane	71.7	81.09
TraesCS3A01G302200.1	Wheat	plastid	75.81	79.54
HORVU3Hr1G073960.5	Barley	plastid	82.99	77.64
KRH59316	Soybean	plasma membrane	66.28	74.1
Solyc11g008960.1.1	Tomato	plasma membrane	65.54	74.01
KRH43169	Soybean	plasma membrane	66.13	73.93
PGSC0003DMT400041690	Potato	plasma membrane	64.96	73.34
PGSC0003DMT400056093	Potato	plasma membrane	63.49	71.69
Solyc03g078520.2.1	Tomato	plasma membrane	63.49	71.33
CDX85768	Canola	plasma membrane	63.64	71.03
Bra028592.1-P	Field mustard	plasma membrane	63.64	71.03
CDY40089	Canola	plasma membrane	63.34	70.7
KRG97568	Soybean	plasma membrane	62.76	70.63
AT5G10290.1	Thale cress	plasma membrane	62.76	69.82
Bra024369.1-P	Field mustard	plasma membrane	57.48	69.75
KRH31305	Soybean	plasma membrane	64.08	69.04
VIT_00s0848g00010.t01	Wine grape	plasma membrane, plastid	20.97	68.75
CDY08807	Canola	plasma membrane	61.0	68.42
CDY55159	Canola	extracellular, plasma membrane, vacuole	60.85	68.26
AT5G65240.2	Thale cress	plasma membrane	61.14	65.16
Zm00001d048877_P002	Maize	plasma membrane	51.03	56.31
Zm00001d025580_P001	Maize	plasma membrane	47.51	52.09
Zm00001d016928_P010	Maize	plasma membrane	47.36	51.6
Zm00001d037840_P001	Maize	cytosol	27.57	51.09
Zm00001d024430_P002	Maize	plasma membrane	47.65	50.94
Zm00001d050868_P004	Maize	plasma membrane	46.33	50.72
Zm00001d049480_P005	Maize	plasma membrane	45.89	47.5
Zm00001d008724_P007	Maize	plasma membrane	42.96	46.51
Zm00001d017913_P001	Maize	plasma membrane	42.52	46.18
Zm00001d036887_P001	Maize	plasma membrane	18.48	45.99
Zm00001d037297_P002	Maize	plasma membrane	43.11	44.68
Zm00001d039678_P002	Maize	plasma membrane	42.38	43.66
Zm00001d051741_P001	Maize	cytosol	23.02	42.2
Zm00001d016197_P001	Maize	vacuole	38.56	42.08
Zm00001d045728_P003	Maize	plasma membrane	43.4	40.66
Zm00001d009801_P001	Maize	plasma membrane	33.28	38.74
Zm00001d018347_P001	Maize	cytosol	4.25	36.25
Zm00001d032142_P004	Maize	plasma membrane	41.5	33.97
Zm00001d028560_P020	Maize	plasma membrane	28.01	31.99
Zm00001d039243_P001	Maize	golgi, plasma membrane	17.6	31.83
Zm00001d041215_P002	Maize	plasma membrane	28.89	31.17
Zm00001d047842_P003	Maize	plasma membrane	28.01	30.08
Zm00001d031211_P002	Maize	plasma membrane	29.33	29.15

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100501217	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	UniProt:A0A1D6L153
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
ProteinID:ONM08259.1	PFAM:PF00069	PFAM:PF08263	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF33	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix	UniParc:UPI000843F6DD	EnsemblPlantsGene:Zm00001d033652	EnsemblPlants:Zm00001d033652_P002
EnsemblPlants:Zm00001d033652_T002	SEG:seg	:	:	:	:

Description

Probable LRR receptor-like serine/threonine-protein kinase

Coordinates

chr1:-:269683309..269688890

Molecular Weight (calculated)

75030.6 Da

IEP (calculated)

6.259

GRAVY (calculated)

-0.205

Length

682 amino acids

Sequence
(BLAST)

001: MGSRSGTAPP AVNFDAWSQP AESSTYAFTV HTRGGGGGGG AGDEGSGVNH RISRSRSGRR GRTSPGLSLL CANNRRKMDL LSIILVIASL LPFAASDGQG
101: DALYDMKLKL NATGSQLSDW NQNQVNPCTW NSVICDNNNH VVQVTLASMG FTGVLSPRIG DLEYLNVLSL PGNNISGGIP EEFGNLSRLT SLDLEDNLLV
201: GPIPASLGRL SKLQLLILSQ NNLNGSIPDT LASILSLTDI RLAYNKLTGQ IPSQLFQVAR YNFSGNNLTC GANFLHPCAS NMSYQGSSRG STIGIVLGTV
301: GGLMGLLIIW AVFIICNGRR KSHLREIFVD VSGEDDRRIA FGQLKRFAWR ELQLATDNFS EKNVLGQGGF GKVYKGALPD GTKIAVKRLT DYESPGGEAA
401: FLREVELISV AVHRNLLRLI GFCTTQTERL LVYPFMQNLS VAYRLREFKP GEPILDWSAR KRVAIGTARG LEYLHEHCNP KIIHRDVKAA NVLLDEGFEP
501: VVGDFGLAKL VDVQKTSVTT QVRGTMGHIA PEYLSTGKSS ERTDVFGYGI MLLELVTGQR AIDFSRLEEE DDVLLLDHVK KLQREGHLDA IVDRNLNSCY
601: NGQEVEMMIQ IALLCTQASP EDRPSMSEVV RMLEGEGLAE RWEEWQQVEV TRRQDYERMQ QRFDWGEDSI YNQDAIELSA GR

Best Arabidopsis Sequence Match ( AT5G10290.2 )
(BLAST)

001: MRMFSLQKMA MAFTLLFFAC LCSFVSPDAQ GDALFALRIS LRALPNQLSD WNQNQVNPCT WSQVICDDKN FVTSLTLSDM NFSGTLSSRV GILENLKTLT
101: LKGNGITGEI PEDFGNLTSL TSLDLEDNQL TGRIPSTIGN LKKLQFLTLS RNKLNGTIPE SLTGLPNLLN LLLDSNSLSG QIPQSLFEIP KYNFTSNNLN
201: CGGRQPHPCV SAVAHSGDSS KPKTGIIAGV VAGVTVVLFG ILLFLFCKDR HKGYRRDVFV DVAGEVDRRI AFGQLKRFAW RELQLATDNF SEKNVLGQGG
301: FGKVYKGVLP DNTKVAVKRL TDFESPGGDA AFQREVEMIS VAVHRNLLRL IGFCTTQTER LLVYPFMQNL SLAHRLREIK AGDPVLDWET RKRIALGAAR
401: GFEYLHEHCN PKIIHRDVKA ANVLLDEDFE AVVGDFGLAK LVDVRRTNVT TQVRGTMGHI APEYLSTGKS SERTDVFGYG IMLLELVTGQ RAIDFSRLEE
501: EDDVLLLDHV KKLEREKRLG AIVDKNLDGE YIKEEVEMMI QVALLCTQGS PEDRPVMSEV VRMLEGEGLA ERWEEWQNVE VTRRHEFERL QRRFDWGEDS
601: MHNQDAIELS GGR

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Source:UniProtKB/Swiss-Prot;Acc:C0LGT1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.