Factsheet for VIT_00s0634g00030.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0472g00020.t01	Wine grape	cytosol, nucleus	15.32	100.0
VIT_00s0641g00010.t01	Wine grape	cytosol	100.0	64.74
VIT_00s0646g00030.t01	Wine grape	cytosol	95.32	64.18
VIT_00s0848g00010.t01	Wine grape	plasma membrane, plastid	55.74	62.98
OQU91137	Sorghum	plasma membrane	85.11	42.02
KRH59316	Soybean	plasma membrane	91.49	35.25
GSMUA_Achr8P23480_001	Banana	plasma membrane	89.36	34.83
KRH43169	Soybean	plasma membrane	90.21	34.75
Solyc11g008960.1.1	Tomato	plasma membrane	88.51	34.44
PGSC0003DMT400041690	Potato	plasma membrane	88.09	34.27
Bra024369.1-P	Field mustard	plasma membrane	81.7	34.16
PGSC0003DMT400056093	Potato	plasma membrane	86.81	33.77
VIT_12s0121g00310.t01	Wine grape	cytosol, mitochondrion	42.55	33.67
Solyc03g078520.2.1	Tomato	plasma membrane	86.81	33.61
Os02t0283800-01	Rice	plasma membrane	86.81	33.61
AT5G10290.1	Thale cress	plasma membrane	85.53	32.79
CDY40089	Canola	plasma membrane	85.11	32.73
CDX85768	Canola	plasma membrane	85.11	32.73
Bra028592.1-P	Field mustard	plasma membrane	85.11	32.73
KRG97568	Soybean	plasma membrane	83.83	32.51
TraesCS3B01G334400.2	Wheat	plasma membrane	83.4	32.45
TraesCS3D01G299800.1	Wheat	plasma membrane	83.4	32.4
Zm00001d015971_P004	Maize	plasma membrane	84.68	32.2
EES04934	Sorghum	plasma membrane	84.26	31.78
CDY08807	Canola	plasma membrane	82.13	31.74
CDY55159	Canola	extracellular, plasma membrane, vacuole	82.13	31.74
KRH31305	Soybean	plasma membrane	84.26	31.28
TraesCS3A01G302200.1	Wheat	plastid	83.4	30.15
AT5G65240.2	Thale cress	plasma membrane	81.28	29.84
Zm00001d033652_P002	Maize	plasma membrane	84.68	29.18
VIT_07s0031g02910.t01	Wine grape	cytosol	68.94	28.27
HORVU3Hr1G073960.5	Barley	plastid	83.4	26.89
VIT_18s0164g00070.t01	Wine grape	plasma membrane	68.51	25.8
VIT_07s0031g01410.t01	Wine grape	plasma membrane	68.09	25.64
GSMUA_Achr2P22230_001	Banana	plasma membrane	74.04	24.03
VIT_01s0127g00230.t01	Wine grape	plasma membrane	62.55	23.48
VIT_12s0055g01160.t01	Wine grape	plasma membrane	60.85	23.44
VIT_14s0083g00620.t01	Wine grape	plasma membrane	61.7	23.31
VIT_12s0028g00340.t01	Wine grape	golgi, plasma membrane	34.89	23.3
VIT_01s0010g01000.t01	Wine grape	plasma membrane	61.28	23.04
VIT_19s0014g00110.t01	Wine grape	endoplasmic reticulum, plasma membrane	34.47	22.88
VIT_12s0055g01150.t01	Wine grape	plasma membrane	57.87	22.37
VIT_11s0037g00960.t01	Wine grape	plasma membrane	57.87	21.25
VIT_10s0003g01490.t01	Wine grape	plasma membrane	54.47	21.19
VIT_12s0055g01280.t01	Wine grape	plasma membrane	39.15	17.93
VIT_17s0000g05570.t01	Wine grape	plasma membrane	34.89	13.62
VIT_02s0087g00170.t01	Wine grape	plasma membrane	32.34	12.75

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100250085	wikigene:100250085	MapMan:50.2.7	ProteinID:CCB57423	ProteinID:CCB57423.1
ProteinID:CCB62917	ProteinID:CCB62917.1	UniProt:F6I7J9	EMBL:FN596052	EMBL:FN596805	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0004675	GO:GO:0004871
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310
GO:GO:0016740	GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100250085
wikigene:LOC100250085	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001
PANTHER:PTHR27001:SF33	InterPro:Prot_kinase_dom	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002108F11
ArrayExpress:VIT_00s0634g00030	EnsemblPlantsGene:VIT_00s0634g00030	EnsemblPlants:VIT_00s0634g00030.t01	RefSeq:XP_003635443	RefSeq:XP_003635443.1	:

Description

No Description!

Coordinates

chrUn:-:33300433..33302499

Molecular Weight (calculated)

26761.0 Da

IEP (calculated)

4.982

GRAVY (calculated)

-0.417

Length

235 amino acids

Sequence
(BLAST)

001: VKPGEPVLDW PTRKRVALGT ARGLEYLHEH CNPKIIHRDV KAANVLLDED FEAVVGDFGL AKLVDVRITS VTTQVRGTMG HIAPEYLSTG KSSERTDVFG
101: YGIMLLELVT GQPAVDFSRL EGEDDILLLD HVKKLEREKR LAVIVDRNLN RNYDIQEVEM MIQVALLCTQ PSPGDRPAMS EVVRMLEGEG LAERWEEWQH
201: VEVSRRQEYE RLQRRFDCGE DSLYHHDAIE LSGGR

Best Arabidopsis Sequence Match ( AT1G71830.1 )
(BLAST)

001: MESSYVVFIL LSLILLPNHS LWLASANLEG DALHTLRVTL VDPNNVLQSW DPTLVNPCTW FHVTCNNENS VIRVDLGNAE LSGHLVPELG VLKNLQYLEL
101: YSNNITGPIP SNLGNLTNLV SLDLYLNSFS GPIPESLGKL SKLRFLRLNN NSLTGSIPMS LTNITTLQVL DLSNNRLSGS VPDNGSFSLF TPISFANNLD
201: LCGPVTSHPC PGSPPFSPPP PFIQPPPVST PSGYGITGAI AGGVAAGAAL LFAAPAIAFA WWRRRKPLDI FFDVPAEEDP EVHLGQLKRF SLRELQVASD
301: GFSNKNILGR GGFGKVYKGR LADGTLVAVK RLKEERTPGG ELQFQTEVEM ISMAVHRNLL RLRGFCMTPT ERLLVYPYMA NGSVASCLRE RPPSQPPLDW
401: PTRKRIALGS ARGLSYLHDH CDPKIIHRDV KAANILLDEE FEAVVGDFGL AKLMDYKDTH VTTAVRGTIG HIAPEYLSTG KSSEKTDVFG YGIMLLELIT
501: GQRAFDLARL ANDDDVMLLD WVKGLLKEKK LEMLVDPDLQ TNYEERELEQ VIQVALLCTQ GSPMERPKMS EVVRMLEGDG LAEKWDEWQK VEILREEIDL
601: SPNPNSDWIL DSTYNLHAVE LSGPR

Arabidopsis Description

SERK1SERK1 [Source:UniProtKB/TrEMBL;Acc:A0A178W829]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.