Factsheet for VIT_12s0121g00310.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 4
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0634g00030.t01	Wine grape	cytosol	33.67	42.55
VIT_12s0055g01150.t01	Wine grape	plasma membrane	68.35	33.39
VIT_00s0646g00030.t01	Wine grape	cytosol	36.36	30.95
GSMUA_Achr7P17210_001	Banana	cytosol	50.84	30.63
VIT_00s0641g00010.t01	Wine grape	cytosol	35.69	29.2
VIT_12s0055g01160.t01	Wine grape	plasma membrane	57.24	27.87
VIT_00s0848g00010.t01	Wine grape	plasma membrane, plastid	18.86	26.92
GSMUA_Achr10P...	Banana	plasma membrane	53.87	25.56
TraesCS6D01G186900.2	Wheat	plasma membrane	51.85	25.5
VIT_07s0031g01410.t01	Wine grape	plasma membrane	53.54	25.48
GSMUA_Achr2P14850_001	Banana	plastid	53.54	25.44
EES12285	Sorghum	plasma membrane	53.2	25.4
Zm00001d025580_P001	Maize	plasma membrane	53.2	25.4
TraesCS6A01G203600.2	Wheat	cytosol	51.85	25.29
KXG24562	Sorghum	plasma membrane	53.54	25.2
Os08t0174700-01	Rice	plasma membrane	52.86	25.16
VIT_18s0164g00070.t01	Wine grape	plasma membrane	52.86	25.16
TraesCS7D01G291200.3	Wheat	plasma membrane	52.53	25.12
TraesCS7A01G293300.3	Wheat	plasma membrane	52.53	25.08
Os04t0457800-01	Rice	plasma membrane	52.86	25.0
Zm00001d024430_P002	Maize	plasma membrane	53.54	24.92
Zm00001d016928_P010	Maize	plasma membrane	52.19	24.76
EES07030	Sorghum	plasma membrane	52.19	24.76
TraesCS7B01G182300.1	Wheat	plasma membrane	51.85	24.76
GSMUA_Achr7P11620_001	Banana	plasma membrane	53.54	24.73
TraesCS2D01G321400.1	Wheat	mitochondrion	52.19	24.72
TraesCS2B01G340700.1	Wheat	plasma membrane	52.19	24.72
TraesCS2A01G343100.1	Wheat	mitochondrion, plasma membrane	52.19	24.72
Zm00001d050868_P004	Maize	plasma membrane	51.85	24.72
HORVU6Hr1G049080.7	Barley	plasma membrane	52.19	24.68
TraesCS6B01G223700.3	Wheat	plasma membrane	52.19	24.68
GSMUA_AchrUn_...	Banana	plasma membrane	51.18	24.13
HORVU7Hr1G068990.2	Barley	mitochondrion	52.53	23.15
Zm00001d049480_P005	Maize	plasma membrane	50.51	22.76
HORVU2Hr1G080020.6	Barley	cytosol	52.53	22.03
GSMUA_Achr10P...	Banana	mitochondrion	53.54	21.93
Os06t0225300-01	Rice	plasma membrane	40.07	19.32
VIT_19s0014g00110.t01	Wine grape	endoplasmic reticulum, plasma membrane	22.9	19.21
VIT_07s0031g02910.t01	Wine grape	cytosol	36.7	19.02
VIT_12s0028g00340.t01	Wine grape	golgi, plasma membrane	22.22	18.75
VIT_01s0010g01000.t01	Wine grape	plasma membrane	39.39	18.72
VIT_12s0055g01280.t01	Wine grape	plasma membrane	32.32	18.71
VIT_14s0083g00620.t01	Wine grape	plasma membrane	39.06	18.65
VIT_01s0127g00230.t01	Wine grape	plasma membrane	37.37	17.73
VIT_10s0003g01490.t01	Wine grape	plasma membrane	34.01	16.72
VIT_11s0037g00960.t01	Wine grape	plasma membrane	35.69	16.56
VIT_00s0472g00020.t01	Wine grape	cytosol, nucleus	1.68	13.89
VIT_17s0000g05570.t01	Wine grape	plasma membrane	24.58	12.13
VIT_02s0087g00170.t01	Wine grape	plasma membrane	22.56	11.24

Protein Annotations

KEGG:04150+2.7.11.1	KEGG:04151+2.7.11.1	KEGG:04714+2.7.11.1	KEGG:04926+2.7.11.1	KEGG:05165+2.7.11.1	Gene3D:1.10.510.10
EntrezGene:100246725	wikigene:100246725	MapMan:50.2.7	ProteinID:CCB62637	ProteinID:CCB62637.1	UniProt:F6I6R9
EMBL:FN596758	GO:GO:0000166	GO:GO:0003674	GO:GO:0003676	GO:GO:0003824	GO:GO:0004672
GO:GO:0004675	GO:GO:0004871	GO:GO:0005102	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0006139	GO:GO:0006259	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0007166	GO:GO:0007178	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0015074	GO:GO:0016020	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0038023	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100246725	wikigene:LOC100246725
PFAM:PF00069	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF1	InterPro:Prot_kinase_dom	InterPro:SERK
SUPFAM:SSF56112	TIGR:TC62230	UniParc:UPI0002108EC0	ArrayExpress:VIT_12s0121g00310	EnsemblPlantsGene:VIT_12s0121g00310	EnsemblPlants:VIT_12s0121g00310.t01
RefSeq:XP_002263174	RefSeq:XP_002263174.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr12:+:12367794..12383363

Molecular Weight (calculated)

33666.5 Da

IEP (calculated)

6.351

GRAVY (calculated)

-0.183

Length

297 amino acids

Sequence
(BLAST)

001: MNVVYKILQY LKGTPRKGLH FGKHDQFKIE AFTDADWAGS IEDRRSTSGY CTFVFGNLIT WRSKKQNVVA RSSAEVKFRS IAHGICEVLW IKRVLEELKI
101: TIHPLAMIHN PSEVVVADFG LAKLVDYRDT HVTTAVHGTL GHIAPEYLFT GRSLEKTDVY GYGIMLLELI TGQRAFDLAR LASNENVMLL SLVKELLNNK
201: KLETLVDSKL QGYYIVEEVE ELIQVALLCT LSTASDRPKM SDVVKMLEGD GLAERWEQWQ KEDIICGEQN HSNFPSNNWI INDSTPGLHP EELFGPR

Best Arabidopsis Sequence Match ( AT1G34210.1 )
(BLAST)

001: MGRKKFEAFG FVCLISLLLL FNSLWLASSN MEGDALHSLR ANLVDPNNVL QSWDPTLVNP CTWFHVTCNN ENSVIRVDLG NADLSGQLVP QLGQLKNLQY
101: LELYSNNITG PVPSDLGNLT NLVSLDLYLN SFTGPIPDSL GKLFKLRFLR LNNNSLTGPI PMSLTNIMTL QVLDLSNNRL SGSVPDNGSF SLFTPISFAN
201: NLDLCGPVTS RPCPGSPPFS PPPPFIPPPI VPTPGGYSAT GAIAGGVAAG AALLFAAPAL AFAWWRRRKP QEFFFDVPAE EDPEVHLGQL KRFSLRELQV
301: ATDSFSNKNI LGRGGFGKVY KGRLADGTLV AVKRLKEERT PGGELQFQTE VEMISMAVHR NLLRLRGFCM TPTERLLVYP YMANGSVASC LRERPPSQLP
401: LAWSIRQQIA LGSARGLSYL HDHCDPKIIH RDVKAANILL DEEFEAVVGD FGLARLMDYK DTHVTTAVRG TIGHIAPEYL STGKSSEKTD VFGYGIMLLE
501: LITGQRAFDL ARLANDDDVM LLDWVKGLLK EKKLEMLVDP DLQSNYTEAE VEQLIQVALL CTQSSPMERP KMSEVVRMLE GDGLAEKWDE WQKVEVLRQE
601: VELSSHPTSD WILDSTDNLH AMELSGPR

Arabidopsis Description

SERK2Somatic embryogenesis receptor kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIC7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.