Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 2
- plasma membrane 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- golgi 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS6A01G203600.2 | Wheat | cytosol | 98.51 | 97.7 |
TraesCS6B01G223700.3 | Wheat | plasma membrane | 98.68 | 94.9 |
HORVU6Hr1G049080.7 | Barley | plasma membrane | 98.34 | 94.59 |
EES07030 | Sorghum | plasma membrane | 92.55 | 89.3 |
Zm00001d016928_P010 | Maize | plasma membrane | 92.05 | 88.82 |
TraesCS2D01G321400.1 | Wheat | mitochondrion | 90.89 | 87.56 |
GSMUA_Achr7P17210_001 | Banana | cytosol | 71.36 | 87.42 |
Zm00001d050868_P004 | Maize | plasma membrane | 90.07 | 87.32 |
GSMUA_Achr2P14850_001 | Banana | plastid | 88.25 | 85.28 |
TraesCS7D01G291200.3 | Wheat | plasma membrane | 87.58 | 85.19 |
VIT_07s0031g01410.t01 | Wine grape | plasma membrane | 86.26 | 83.49 |
VIT_18s0164g00070.t01 | Wine grape | plasma membrane | 85.93 | 83.17 |
KRG91762 | Soybean | plasma membrane | 85.76 | 83.01 |
KRH35013 | Soybean | plasma membrane | 85.76 | 83.01 |
GSMUA_AchrUn_... | Banana | plasma membrane | 86.42 | 82.86 |
Bra003911.1-P | Field mustard | plasma membrane | 78.31 | 82.84 |
PGSC0003DMT400032797 | Potato | cytosol, plasma membrane, plastid | 70.86 | 82.63 |
CDY36679 | Canola | plasma membrane | 84.93 | 82.61 |
GSMUA_Achr7P11620_001 | Banana | plasma membrane | 87.75 | 82.43 |
Solyc04g072570.2.1 | Tomato | extracellular | 85.43 | 82.03 |
CDX96350 | Canola | plasma membrane | 84.77 | 81.92 |
CDX72833 | Canola | plasma membrane | 84.6 | 81.76 |
AT1G71830.1 | Thale cress | plasma membrane | 84.44 | 81.6 |
KRH70218 | Soybean | endoplasmic reticulum | 84.27 | 81.57 |
GSMUA_Achr10P... | Banana | plasma membrane | 84.44 | 81.47 |
AT1G34210.1 | Thale cress | plasma membrane | 84.27 | 81.05 |
Bra037006.1-P | Field mustard | mitochondrion | 64.24 | 81.0 |
PGSC0003DMT400045607 | Potato | cytosol, plasma membrane, plastid | 70.36 | 80.95 |
KRH10503 | Soybean | cytosol, plastid | 62.42 | 80.56 |
PGSC0003DMT400070819 | Potato | plasma membrane | 82.45 | 78.55 |
Solyc01g104970.2.1 | Tomato | plasma membrane | 79.97 | 78.41 |
Bra016112.1-P | Field mustard | plasma membrane | 78.48 | 78.09 |
Solyc10g047140.1.1 | Tomato | plasma membrane | 79.3 | 77.89 |
CDY46116 | Canola | plasma membrane | 76.99 | 77.11 |
CDX72403 | Canola | plasma membrane | 76.99 | 77.11 |
CDX68975 | Canola | plasma membrane | 78.15 | 76.75 |
CDX75351 | Canola | plasma membrane | 78.15 | 76.62 |
Bra011439.1-P | Field mustard | plasma membrane | 65.89 | 76.54 |
CDY45042 | Canola | plasma membrane | 77.48 | 76.47 |
Bra034562.1-P | Field mustard | plasma membrane | 71.52 | 76.33 |
KRH43924 | Soybean | plasma membrane | 77.81 | 76.3 |
VIT_12s0055g01160.t01 | Wine grape | plasma membrane | 76.82 | 76.07 |
GSMUA_Achr10P... | Banana | mitochondrion | 88.74 | 73.93 |
VIT_12s0055g01280.t01 | Wine grape | plasma membrane | 61.76 | 72.71 |
AT4G33430.2 | Thale cress | plasma membrane | 78.64 | 71.75 |
AT2G13790.1 | Thale cress | plasma membrane | 73.51 | 71.61 |
KRH58311 | Soybean | plasma membrane | 72.68 | 70.69 |
Bra032128.1-P | Field mustard | cytosol | 56.95 | 70.64 |
CDY28301 | Canola | plasma membrane | 46.36 | 70.53 |
CDX68299 | Canola | plasma membrane | 82.62 | 70.38 |
CDX89615 | Canola | plasma membrane | 69.7 | 69.02 |
CDX93126 | Canola | plasma membrane | 69.54 | 68.85 |
AT2G13800.3 | Thale cress | plasma membrane | 67.72 | 68.05 |
CDY48450 | Canola | plasma membrane | 68.87 | 67.97 |
Bra041056.1-P | Field mustard | plasma membrane | 58.11 | 67.89 |
VIT_12s0055g01150.t01 | Wine grape | plasma membrane | 66.72 | 66.28 |
Bra032125.1-P | Field mustard | plasma membrane | 58.11 | 65.36 |
CDX71165 | Canola | plasma membrane | 66.72 | 65.21 |
KRH42193 | Soybean | plasma membrane | 66.23 | 64.94 |
CDY39690 | Canola | cytosol | 65.23 | 64.91 |
KRH58312 | Soybean | plasma membrane | 64.74 | 63.58 |
Bra013136.1-P | Field mustard | plasma membrane | 55.63 | 58.13 |
TraesCS3D01G299800.1 | Wheat | plasma membrane | 52.15 | 52.07 |
VIT_12s0121g00310.t01 | Wine grape | cytosol, mitochondrion | 25.5 | 51.85 |
TraesCS6D01G269400.1 | Wheat | plasma membrane | 53.48 | 51.6 |
TraesCS7D01G212800.1 | Wheat | plasma membrane | 52.65 | 50.88 |
TraesCS3D01G091000.2 | Wheat | plasma membrane | 53.31 | 50.79 |
TraesCS7D01G416400.1 | Wheat | plasma membrane | 49.34 | 45.99 |
TraesCS7D01G134300.3 | Wheat | plasma membrane | 47.02 | 45.73 |
TraesCS6D01G146100.1 | Wheat | plasma membrane | 47.02 | 45.37 |
TraesCS1D01G116300.1 | Wheat | plasma membrane | 42.38 | 41.49 |
TraesCS3D01G173200.1 | Wheat | golgi, plasma membrane | 20.2 | 35.06 |
TraesCS4D01G212600.1 | Wheat | plasma membrane | 32.45 | 33.28 |
TraesCS5D01G007200.1 | Wheat | plasma membrane | 33.28 | 32.47 |
Protein Annotations
Gene3D:1.10.510.10 | MapMan:11.3.2.1.2 | MapMan:18.4.1.2 | Gene3D:3.30.200.20 | Gene3D:3.80.10.10 | GO:GO:0000166 |
GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006464 |
GO:GO:0006468 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016740 |
GO:GO:0019538 | InterPro:IPR000719 | InterPro:IPR032675 | InterPro:Kinase-like_dom_sf | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf |
PFAM:PF00069 | PFAM:PF08263 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 | PANTHER:PTHR27001 |
PANTHER:PTHR27001:SF215 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | SMART:SM00220 | SUPFAM:SSF52058 | SUPFAM:SSF56112 |
InterPro:Ser/Thr_kinase_AS | EnsemblPlantsGene:TraesCS6D01G186900 | EnsemblPlants:TraesCS6D01G186900.2 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr6D:-:249448772..249456678
Molecular Weight (calculated)
66657.9 Da
IEP (calculated)
5.302
GRAVY (calculated)
-0.196
Length
604 amino acids
Sequence
(BLAST)
(BLAST)
001: MLIYLLSIIG DALYNLRQSL KDSNNVLQSW DPTLVNPCTW FHVTCNNDNS VIRVDLGNAQ LSGVLVSQLG QLKNLQYLEL YSNNISGPIP AELGNLTSLV
101: SLDLYLNKFT GVIPDSLGNL LKLRFLRLNN NSMSGQIPKS LTDITTLQVL DLSNNNLSGA VPSTGSFSLF TPISFANNPL LCGPGTTKPC PGDPPFSPPP
201: PYNPPTPPTQ SAGASSTGAI AGGVAAGAAL VFAVPAIAFA MWRRRKPEEH FFDVPAEEDP EVHLGQLKKF SLRELQVASD NFNNKNILGR GGFGKVYKGR
301: LADGTLVAVK RLKEERTPGG ELQFQTEVEM ISMAVHRNLL RLRGFCMTPT ERLLVYPYMA NGSVASRLRE RQPSEPPLDW DTRRRIALGS ARGLSYLHDH
401: CDPKIIHRDV KAANILLDED FEAVVGDFGL AKLMDYKDTH VTTAVRGTIG HIAPEYLSTG KSSEKTDVFG YGITLLELIT GQRAFDLARL ANDDDVMLLD
501: WVKGLLKEKK VEMLVDPDLQ SNYEETEVES LIQVALLCTQ GSPVERPKMS EVVRMLEGDG LAERWEEWQK VEVVRQEAEL APLRNDWIVD STYNLRAVEL
601: SGPR
101: SLDLYLNKFT GVIPDSLGNL LKLRFLRLNN NSMSGQIPKS LTDITTLQVL DLSNNNLSGA VPSTGSFSLF TPISFANNPL LCGPGTTKPC PGDPPFSPPP
201: PYNPPTPPTQ SAGASSTGAI AGGVAAGAAL VFAVPAIAFA MWRRRKPEEH FFDVPAEEDP EVHLGQLKKF SLRELQVASD NFNNKNILGR GGFGKVYKGR
301: LADGTLVAVK RLKEERTPGG ELQFQTEVEM ISMAVHRNLL RLRGFCMTPT ERLLVYPYMA NGSVASRLRE RQPSEPPLDW DTRRRIALGS ARGLSYLHDH
401: CDPKIIHRDV KAANILLDED FEAVVGDFGL AKLMDYKDTH VTTAVRGTIG HIAPEYLSTG KSSEKTDVFG YGITLLELIT GQRAFDLARL ANDDDVMLLD
501: WVKGLLKEKK VEMLVDPDLQ SNYEETEVES LIQVALLCTQ GSPVERPKMS EVVRMLEGDG LAERWEEWQK VEVVRQEAEL APLRNDWIVD STYNLRAVEL
601: SGPR
001: MESSYVVFIL LSLILLPNHS LWLASANLEG DALHTLRVTL VDPNNVLQSW DPTLVNPCTW FHVTCNNENS VIRVDLGNAE LSGHLVPELG VLKNLQYLEL
101: YSNNITGPIP SNLGNLTNLV SLDLYLNSFS GPIPESLGKL SKLRFLRLNN NSLTGSIPMS LTNITTLQVL DLSNNRLSGS VPDNGSFSLF TPISFANNLD
201: LCGPVTSHPC PGSPPFSPPP PFIQPPPVST PSGYGITGAI AGGVAAGAAL LFAAPAIAFA WWRRRKPLDI FFDVPAEEDP EVHLGQLKRF SLRELQVASD
301: GFSNKNILGR GGFGKVYKGR LADGTLVAVK RLKEERTPGG ELQFQTEVEM ISMAVHRNLL RLRGFCMTPT ERLLVYPYMA NGSVASCLRE RPPSQPPLDW
401: PTRKRIALGS ARGLSYLHDH CDPKIIHRDV KAANILLDEE FEAVVGDFGL AKLMDYKDTH VTTAVRGTIG HIAPEYLSTG KSSEKTDVFG YGIMLLELIT
501: GQRAFDLARL ANDDDVMLLD WVKGLLKEKK LEMLVDPDLQ TNYEERELEQ VIQVALLCTQ GSPMERPKMS EVVRMLEGDG LAEKWDEWQK VEILREEIDL
601: SPNPNSDWIL DSTYNLHAVE LSGPR
101: YSNNITGPIP SNLGNLTNLV SLDLYLNSFS GPIPESLGKL SKLRFLRLNN NSLTGSIPMS LTNITTLQVL DLSNNRLSGS VPDNGSFSLF TPISFANNLD
201: LCGPVTSHPC PGSPPFSPPP PFIQPPPVST PSGYGITGAI AGGVAAGAAL LFAAPAIAFA WWRRRKPLDI FFDVPAEEDP EVHLGQLKRF SLRELQVASD
301: GFSNKNILGR GGFGKVYKGR LADGTLVAVK RLKEERTPGG ELQFQTEVEM ISMAVHRNLL RLRGFCMTPT ERLLVYPYMA NGSVASCLRE RPPSQPPLDW
401: PTRKRIALGS ARGLSYLHDH CDPKIIHRDV KAANILLDEE FEAVVGDFGL AKLMDYKDTH VTTAVRGTIG HIAPEYLSTG KSSEKTDVFG YGIMLLELIT
501: GQRAFDLARL ANDDDVMLLD WVKGLLKEKK LEMLVDPDLQ TNYEERELEQ VIQVALLCTQ GSPMERPKMS EVVRMLEGDG LAEKWDEWQK VEILREEIDL
601: SPNPNSDWIL DSTYNLHAVE LSGPR
Arabidopsis Description
SERK1SERK1 [Source:UniProtKB/TrEMBL;Acc:A0A178W829]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.