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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 5
  • golgi 4
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:cytosol, secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G343100.1
TraesCS2B01G340700.1
TraesCS2D01G321400.1
TraesCS6A01G203600.2
TraesCS6B01G223700.3
TraesCS6D01G186900.2
TraesCS7A01G293300.3
TraesCS7B01G182300.1
TraesCS7D01G291200.3

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G48380.1 TraesCS2A01G343100.1 AT1G71830.1 19616764
AT5G48380.1 TraesCS2B01G340700.1 AT1G71830.1 19616764
AT5G48380.1 TraesCS2D01G321400.1 AT1G71830.1 19616764
AT5G48380.1 TraesCS6A01G203600.2 AT1G71830.1 19616764
AT5G48380.1 TraesCS6B01G223700.3 AT1G71830.1 19616764
AT5G48380.1 TraesCS6D01G186900.2 AT1G71830.1 19616764
AT5G48380.1 TraesCS7A01G293300.3 AT1G71830.1 19616764
AT5G48380.1 TraesCS7B01G182300.1 AT1G71830.1 19616764
AT5G48380.1 TraesCS7D01G291200.3 AT1G71830.1 19616764
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G400900.1 Wheat extracellular, plasma membrane 75.26 75.52
TraesCS3A01G401300.1 Wheat cytosol 50.52 60.42
TraesCS3A01G401200.1 Wheat plasma membrane 54.36 57.78
TraesCS3A01G400700.1 Wheat extracellular, plasma membrane 52.61 56.55
TraesCS3A01G400800.1 Wheat extracellular 51.92 56.02
TraesCS3A01G401000.1 Wheat cytosol 31.01 51.74
TraesCS7A01G410600.1 Wheat extracellular 45.64 50.0
Bra040380.1-P Field mustard extracellular 33.45 40.85
CDY38095 Canola plasma membrane 37.63 40.75
CDY38092 Canola plasma membrane 37.63 40.3
CDX85492 Canola plasma membrane 37.28 39.93
CDY07991 Canola plasma membrane 35.89 39.77
CDX69430 Canola extracellular 32.75 39.33
TraesCS2A01G345900.1 Wheat extracellular 31.01 38.36
Bra001255.1-P Field mustard plasma membrane 34.49 38.22
CDY16992 Canola cytosol, plasma membrane, plastid 25.09 35.82
Bra006366.1-P Field mustard mitochondrion 34.49 30.46
PGSC0003DMT400070667 Potato cytosol 23.0 29.86
CDX70708 Canola extracellular, plasma membrane, vacuole 36.93 29.61
TraesCS5A01G163900.1 Wheat endoplasmic reticulum, extracellular, plasma membrane 28.57 28.57
VIT_05s0094g01290.t01 Wine grape mitochondrion 11.15 25.0
TraesCS1A01G259600.1 Wheat plasma membrane 45.99 21.82
TraesCS4A01G229800.1 Wheat plasma membrane 41.12 19.47
CDY48749 Canola plasma membrane 40.42 18.62
PGSC0003DMT400075495 Potato plasma membrane 36.93 18.03
CDY05685 Canola plasma membrane 38.68 17.76
AT5G48380.1 Thale cress plasma membrane 37.98 17.58
CDX85334 Canola plasma membrane 37.98 17.5
PGSC0003DMT400075494 Potato plasma membrane 35.19 17.35
PGSC0003DMT400070664 Potato cytosol, plasma membrane, plastid 22.3 17.34
PGSC0003DMT400071183 Potato plasma membrane 36.93 17.29
Solyc06g082920.2.1 Tomato plasma membrane 36.93 17.29
VIT_00s0220g00120.t01 Wine grape plasma membrane 36.93 17.07
Bra020705.1-P Field mustard plasma membrane 32.06 16.67
GSMUA_Achr9P08150_001 Banana cytosol, nucleus, plastid 23.0 16.46
PGSC0003DMT400070657 Potato peroxisome, plasma membrane, plastid 22.65 16.21
VIT_00s2085g00010.t01 Wine grape plasma membrane 34.84 16.16
Solyc07g006480.2.1 Tomato plasma membrane 33.1 14.55
TraesCS2A01G346000.1 Wheat plasma membrane 29.97 13.76
Solyc12g096710.1.1 Tomato plasma membrane 36.59 13.01
PGSC0003DMT400070666 Potato plastid 15.33 9.44
GSMUA_Achr2P05730_001 Banana cytosol, peroxisome, plasma membrane 12.89 8.85
CDX86309 Canola golgi, mitochondrion, plasma membrane, plastid 14.29 8.76
Bra037490.1-P Field mustard plastid 13.94 8.55
GSMUA_Achr6P28640_001 Banana plastid 2.79 3.4
Bra038824.1-P Field mustard cytosol 3.14 2.72
Solyc12g096720.1.1 Tomato cytosol 1.05 2.11
PGSC0003DMT400070694 Potato cytosol 1.05 1.42
KRH21660 Soybean cytosol 0.7 1.26
Protein Annotations
EnsemblPlants:TraesCS3A01G401100.1EnsemblPlantsGene:TraesCS3A01G401100Gene3D:3.80.10.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR001611InterPro:IPR032675InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptPANTHER:PTHR44101
PANTHER:PTHR44101:SF3PFAM:PF00560PFAM:PF08263SEG:segSignalP:SignalP-noTMSUPFAM:SSF52058
TMHMM:TMhelixMapMan:35.1::::
Description
No Description!
Coordinates
chr3A:-:647389594..647390457
Molecular Weight (calculated)
32062.9 Da
IEP (calculated)
8.747
GRAVY (calculated)
0.023
Length
287 amino acids
Sequence
(BLAST)
001: MHGYNKLVVW LLLLSSSSSY FGHGISASDV QCLKDLKQSL IDPNDILGKK SHRWNFTDIR DDGDICGFTG VECWNPNENR VLSLRLGNLG LEGPFPRGLE
101: LCTSMTTLDL SGNNFSGPLP EHISEQMPYV SFLDLSNNSF SGGIPASIMN MTYLNILALQ HNQFTGEIPA INLSRLISFN VAKNSLFGPV PDSLQSFPTA
201: NFMGNPGLCG APLDNKCKKR FRVRIHVRLV RIREMFVRIQ KLLHRINDAS IIGASAGFIF GFVVAFYFPH KFLFCGRFQP YTFRVCG
Best Arabidopsis Sequence Match ( AT5G48380.1 )
(BLAST)
001: MMMGRLVFVI WLYNCLCLLL LSSLVDADQA NIDCLRTFKS QVEDPNRYLS TWVFGNETAG YICKFSGVTC WHDDENRVLS IKLSGYGLRG VFPPAVKLCA
101: DLTGLDLSRN NFSGPLPANI STLIPLVTIL DLSYNSFSGE IPMLISNITF LNTLMLQHNQ FTGTLPPQLA QLGRLKTFSV SDNRLVGPIP NFNQTLQFKQ
201: ELFANNLDLC GKPLDDCKSA SSSRGKVVII AAVGGLTAAA LVVGVVLFFY FRKLGAVRKK QDDPEGNRWA KSLKGQKGVK VFMFKKSVSK MKLSDLMKAT
301: EEFKKDNIIA TGRTGTMYKG RLEDGSLLMI KRLQDSQRSE KEFDAEMKTL GSVKNRNLVP LLGYCVANKE RLLMYEYMAN GYLYDQLHPA DEESFKPLDW
401: PSRLKIAIGT AKGLAWLHHS CNPRIIHRNI SSKCILLTAE FEPKISDFGL ARLMNPIDTH LSTFVNGEFG DFGYVAPEYS RTMVATPKGD VYSFGVVLLE
501: LVTGQKATSV TKVSEEKAEE ENFKGNLVEW ITKLSSESKL QEAIDRSLLG NGVDDEIFKV LKVACNCVLP EIAKQRPTMF EVYQLLRAIG ESYNFTADDD
601: ILIPSESGEG DFIEELIVAR
Arabidopsis Description
BIR1Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASS4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.