Factsheet for TraesCS3A01G400800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 2
extracellular 4
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G343100.1
TraesCS2B01G340700.1
TraesCS2D01G321400.1
TraesCS6A01G203600.2
TraesCS6B01G223700.3
TraesCS6D01G186900.2
TraesCS7A01G293300.3
TraesCS7B01G182300.1
TraesCS7D01G291200.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48380.1	TraesCS2A01G343100.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS2B01G340700.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS2D01G321400.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS6A01G203600.2	AT1G71830.1	19616764
AT5G48380.1	TraesCS6B01G223700.3	AT1G71830.1	19616764
AT5G48380.1	TraesCS6D01G186900.2	AT1G71830.1	19616764
AT5G48380.1	TraesCS7A01G293300.3	AT1G71830.1	19616764
AT5G48380.1	TraesCS7B01G182300.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS7D01G291200.3	AT1G71830.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G396100.1	Wheat	plasma membrane	88.35	88.35
TraesCS3B01G434100.1	Wheat	plasma membrane	81.58	80.37
TraesCS3A01G401200.1	Wheat	plasma membrane	80.45	79.26
TraesCS3A01G401000.1	Wheat	cytosol	48.87	75.58
TraesCS3A01G401300.1	Wheat	cytosol	65.41	72.5
TraesCS3A01G400700.1	Wheat	extracellular, plasma membrane	63.91	63.67
TraesCS7A01G410600.1	Wheat	extracellular	53.76	54.58
TraesCS3A01G401100.1	Wheat	extracellular, plasma membrane	56.02	51.92
TraesCS3A01G400900.1	Wheat	extracellular, plasma membrane	54.14	50.35
Os01t0891700-01	Rice	plasma membrane	54.89	47.71
CDY38095	Canola	plasma membrane	42.11	42.26
CDX69430	Canola	extracellular	37.97	42.26
CDY38092	Canola	plasma membrane	42.48	42.16
CDX85492	Canola	plasma membrane	41.73	41.42
TraesCS2A01G345900.1	Wheat	extracellular	34.21	39.22
CDY07991	Canola	plasma membrane	37.59	38.61
CDY16992	Canola	cytosol, plasma membrane, plastid	27.82	36.82
Bra040380.1-P	Field mustard	extracellular	31.95	36.17
Bra001255.1-P	Field mustard	plasma membrane	34.96	35.91
Bra006366.1-P	Field mustard	mitochondrion	40.6	33.23
CDX70708	Canola	extracellular, plasma membrane, vacuole	43.23	32.12
PGSC0003DMT400070667	Potato	cytosol	25.56	30.77
TraesCS5A01G163900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	33.08	30.66
VIT_05s0094g01290.t01	Wine grape	mitochondrion	13.53	28.12
TraesCS1A01G259600.1	Wheat	plasma membrane	60.9	26.78
TraesCS4A01G229800.1	Wheat	plasma membrane	47.74	20.96
PGSC0003DMT400070664	Potato	cytosol, plasma membrane, plastid	27.44	19.78
AT5G48380.1	Thale cress	plasma membrane	43.98	18.87
CDY48749	Canola	plasma membrane	43.98	18.78
VIT_00s0220g00120.t01	Wine grape	plasma membrane	43.61	18.68
VIT_00s2085g00010.t01	Wine grape	plasma membrane	43.23	18.58
CDX85334	Canola	plasma membrane	43.23	18.46
PGSC0003DMT400075494	Potato	plasma membrane	40.23	18.38
CDY05685	Canola	plasma membrane	42.48	18.08
PGSC0003DMT400070657	Potato	peroxisome, plasma membrane, plastid	27.07	17.96
GSMUA_Achr9P08150_001	Banana	cytosol, nucleus, plastid	27.07	17.96
PGSC0003DMT400075495	Potato	plasma membrane	39.47	17.86
PGSC0003DMT400071183	Potato	plasma membrane	40.6	17.62
Solyc06g082920.2.1	Tomato	plasma membrane	39.85	17.29
Bra020705.1-P	Field mustard	plasma membrane	33.83	16.3
TraesCS2A01G346000.1	Wheat	plasma membrane	36.09	15.36
Solyc07g006480.2.1	Tomato	plasma membrane	36.47	14.85
Solyc12g096710.1.1	Tomato	plasma membrane	38.72	12.76
GSMUA_Achr2P05730_001	Banana	cytosol, peroxisome, plasma membrane	17.67	11.24
PGSC0003DMT400070666	Potato	plastid	16.92	9.66
Bra037490.1-P	Field mustard	plastid	16.54	9.4
CDX86309	Canola	golgi, mitochondrion, plasma membrane, plastid	15.41	8.76
GSMUA_Achr6P28640_001	Banana	plastid	2.63	2.98
Solyc12g096720.1.1	Tomato	cytosol	1.5	2.82
Bra038824.1-P	Field mustard	cytosol	3.38	2.72
PGSC0003DMT400070694	Potato	cytosol	1.13	1.42
KRH21660	Soybean	cytosol	0.38	0.63

Protein Annotations

EnsemblPlants:TraesCS3A01G400800.1	EnsemblPlantsGene:TraesCS3A01G400800	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44101
PANTHER:PTHR44101:SF3	PFAM:PF08263	PFAM:PF13516	PFAM:PF13855	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF52058	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr3A:-:647358084..647358884

Molecular Weight (calculated)

29473.4 Da

IEP (calculated)

7.658

GRAVY (calculated)

0.007

Length

266 amino acids

Sequence
(BLAST)

001: MADNTKFLRL FLLLSSSPLC FGTEQDIRCL MSVQGSLADP GGVLRSWNFE NETNGYICRF TGVECWHPDE NKILSLRLGN LGLQGQFPVA LQNCSSLTGL
101: DLSNNNFSGP IPRDISQVMP YLTSLDLSYN SFSGSIPQNI SNMTYLNILN LQHNQLSGQI PPQFTLLTRL TAFNVADNLL SGPIPSLLQN YSASNFAGNQ
201: GLCGSPLDDC PPSRRRWRPV QIKLHRLNDQ SSIGVAVGFV VGFVVAFYFP HCFVCSERLR AYVVRI

Best Arabidopsis Sequence Match ( AT1G27190.1 )
(BLAST)

001: MKKIFITLLW LLFISSFLCS SSSAEDDVLC LQGLKNSLID PSSRLSSWSF PNSSASSICK LTGVSCWNEK ENRIISLQLQ SMQLAGEIPE SLKLCRSLQS
101: LDLSGNDLSG SIPSQICSWL PYLVTLDLSG NKLGGSIPTQ IVECKFLNAL ILSDNKLSGS IPSQLSRLDR LRRLSLAGND LSGTIPSELA RFGGDDFSGN
201: NGLCGKPLSR CGALNGRNLS IIIVAGVLGA VGSLCVGLVI FWWFFIREGS RKKKGYGAGK SKDDSDWIGL LRSHKLVQVT LFQKPIVKIK LGDLMAATNN
301: FSSGNIDVSS RTGVSYKADL PDGSALAVKR LSACGFGEKQ FRSEMNKLGE LRHPNLVPLL GYCVVEDERL LVYKHMVNGT LFSQLHNGGL CDAVLDWPTR
401: RAIGVGAAKG LAWLHHGCQP PYLHQFISSN VILLDDDFDA RITDYGLAKL VGSRDSNDSS FNNGDLGELG YVAPEYSSTM VASLKGDVYG FGIVLLELVT
501: GQKPLSVING VEGFKGSLVD WVSQYLGTGR SKDAIDRSIC DKGHDEEILQ FLKIACSCVV SRPKERPTMI QVYESLKNMA DKHGVSEHYD EFPLVFNKQE
601: A

Arabidopsis Description

Probable inactive receptor kinase At1g27190 [Source:UniProtKB/Swiss-Prot;Acc:O04567]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.