Factsheet for TraesCS3A01G400700.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G343100.1
TraesCS2B01G340700.1
TraesCS2D01G321400.1
TraesCS6A01G203600.2
TraesCS6B01G223700.3
TraesCS6D01G186900.2
TraesCS7A01G293300.3
TraesCS7B01G182300.1
TraesCS7D01G291200.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48380.1	TraesCS2A01G343100.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS2B01G340700.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS2D01G321400.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS6A01G203600.2	AT1G71830.1	19616764
AT5G48380.1	TraesCS6B01G223700.3	AT1G71830.1	19616764
AT5G48380.1	TraesCS6D01G186900.2	AT1G71830.1	19616764
AT5G48380.1	TraesCS7A01G293300.3	AT1G71830.1	19616764
AT5G48380.1	TraesCS7B01G182300.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS7D01G291200.3	AT1G71830.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G395600.1	Wheat	endoplasmic reticulum, vacuole	59.18	72.48
TraesCS3A01G401200.1	Wheat	plasma membrane	69.29	68.52
TraesCS3A01G401300.1	Wheat	cytosol	58.43	65.0
TraesCS3A01G400800.1	Wheat	extracellular	63.67	63.91
Os01t0892300-01	Rice	extracellular, golgi, plasma membrane	65.54	62.72
KXG33866	Sorghum	cytosol	56.55	61.38
TraesCS3A01G401000.1	Wheat	cytosol	36.7	56.98
TraesCS3A01G400900.1	Wheat	extracellular, plasma membrane	56.93	53.15
TraesCS3A01G401100.1	Wheat	extracellular, plasma membrane	56.55	52.61
TraesCS7A01G410600.1	Wheat	extracellular	50.56	51.53
CDY38095	Canola	plasma membrane	42.32	42.64
CDX85492	Canola	plasma membrane	41.95	41.79
CDY38092	Canola	plasma membrane	41.95	41.79
CDX69430	Canola	extracellular	35.58	39.75
CDY07991	Canola	plasma membrane	37.83	39.0
CDY16992	Canola	cytosol, plasma membrane, plastid	29.21	38.81
TraesCS2A01G345900.1	Wheat	extracellular	32.58	37.5
Bra040380.1-P	Field mustard	extracellular	32.58	37.02
Bra001255.1-P	Field mustard	plasma membrane	35.58	36.68
Bra006366.1-P	Field mustard	mitochondrion	39.7	32.62
CDX70708	Canola	extracellular, plasma membrane, vacuole	43.07	32.12
TraesCS5A01G163900.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	31.84	29.62
PGSC0003DMT400070667	Potato	cytosol	22.47	27.15
VIT_05s0094g01290.t01	Wine grape	mitochondrion	12.73	26.56
TraesCS1A01G259600.1	Wheat	plasma membrane	52.43	23.14
TraesCS4A01G229800.1	Wheat	plasma membrane	44.94	19.8
VIT_00s0220g00120.t01	Wine grape	plasma membrane	41.95	18.04
PGSC0003DMT400075495	Potato	plasma membrane	39.33	17.86
AT5G48380.1	Thale cress	plasma membrane	41.2	17.74
PGSC0003DMT400075494	Potato	plasma membrane	38.58	17.7
CDY48749	Canola	plasma membrane	41.2	17.66
PGSC0003DMT400071183	Potato	plasma membrane	40.45	17.62
CDX85334	Canola	plasma membrane	40.82	17.5
VIT_00s2085g00010.t01	Wine grape	plasma membrane	40.45	17.45
Solyc06g082920.2.1	Tomato	plasma membrane	39.33	17.13
CDY05685	Canola	plasma membrane	40.07	17.12
PGSC0003DMT400070664	Potato	cytosol, plasma membrane, plastid	23.22	16.8
GSMUA_Achr9P08150_001	Banana	cytosol, nucleus, plastid	25.09	16.71
PGSC0003DMT400070657	Potato	peroxisome, plasma membrane, plastid	23.97	15.96
Bra020705.1-P	Field mustard	plasma membrane	31.46	15.22
TraesCS2A01G346000.1	Wheat	plasma membrane	33.71	14.4
Solyc07g006480.2.1	Tomato	plasma membrane	34.83	14.24
Solyc12g096710.1.1	Tomato	plasma membrane	38.2	12.64
GSMUA_Achr2P05730_001	Banana	cytosol, peroxisome, plasma membrane	16.48	10.53
PGSC0003DMT400070666	Potato	plastid	15.73	9.01
CDX86309	Canola	golgi, mitochondrion, plasma membrane, plastid	15.73	8.97
Bra037490.1-P	Field mustard	plastid	15.36	8.76
GSMUA_Achr6P28640_001	Banana	plastid	3.37	3.83
Bra038824.1-P	Field mustard	cytosol	3.75	3.02
Solyc12g096720.1.1	Tomato	cytosol	1.12	2.11
PGSC0003DMT400070694	Potato	cytosol	1.12	1.42
KRH21660	Soybean	cytosol	0.37	0.63

Protein Annotations

EnsemblPlants:TraesCS3A01G400700.1	EnsemblPlantsGene:TraesCS3A01G400700	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44101	PANTHER:PTHR44101:SF3
PFAM:PF13855	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	TMHMM:TMhelix	MapMan:35.1

Description

No Description!

Coordinates

chr3A:-:647235887..647236690

Molecular Weight (calculated)

29754.8 Da

IEP (calculated)

6.490

GRAVY (calculated)

0.085

Length

267 amino acids

Sequence
(BLAST)

001: MTDGTKFILF LLLSSSSLCF GSDLDIQCLR SLKQSVIDSN GVLNSSWDFD NLDRPSSVGS ICRFIGVDCW HPDENRVLSL RLGNLGLEGP FPEGLQDCTS
101: MSGLDLSDSK FSGPIPYDIA QQMPYLTYLD LSNNSFTGEI PQSITNLAYL NVLKLQHNQL SGQIPERFNM LSRLTTFSVV DNFLSGPIPT FAHVFSPLYF
201: TGNRGLCGAP LDECPRSRKW RLIPIRLRRI NEESSIGAAV GFVLGFVVAF YFHLFCSKRL LPCVFRA

Best Arabidopsis Sequence Match ( AT3G28450.1 )
(BLAST)

001: MKEIGSKPRK LLPLCFIIFL CFCSSVMAAD EDDIRCLRGL KASLTDPQNA LKSWNFDNTT LGFLCNFVGV SCWNNQENRV INLELRDMGL SGKIPDSLQY
101: CASLQKLDLS SNRLSGNIPT ELCNWLPFLV SLDLSNNELN GEIPPDLAKC SFVNSLVLSD NRLSGQIPVQ FSALGRLGRF SVANNDLSGR IPVFFSSPSY
201: SSDDFSGNKG LCGRPLSSSC GGLSKKNLGI IIAAGVFGAA ASMLLAFGIW WYYHLKWTRR RRSGLTEVGV SGLAQRLRSH KLTQVSLFQK PLVKVKLGDL
301: MAATNNFNSE NIIVSTRTGT TYKALLPDGS ALAVKHLSTC KLGEREFRYE MNQLWELRHS NLAPLLGFCV VEEEKFLVYK YMSNGTLHSL LDSNRGELDW
401: STRFRIGLGA ARGLAWLHHG CRPPILHQNI CSSVILIDED FDARIIDSGL ARLMVPSDNN ESSFMTGDLG EFGYVAPEYS TTMLASLKGD VYGLGVVLLE
501: LATGLKAVGG EGFKGSLVDW VKQLESSGRI AETFDENIRG KGHDEEISKF VEIALNCVSS RPKERWSMFQ AYQSLKAIAE KQGYSFSEQD DDFPLIFDTQ
601: ENEKV

Arabidopsis Description

BIR2Inactive LRR receptor-like serine/threonine-protein kinase BIR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSI9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.