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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 1
  • plasma membrane 3
  • cytosol 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
EpiLoc:plasma membrane
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400070819

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G48380.1 PGSC0003DMT400070819 AT1G71830.1 19616764
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400070664 Potato cytosol, plasma membrane, plastid 67.87 40.65
PGSC0003DMT400070657 Potato peroxisome, plasma membrane, plastid 62.9 34.66
TraesCS3A01G401000.1 Wheat cytosol 25.79 33.14
PGSC0003DMT400085762 Potato extracellular 29.41 30.95
VIT_05s0094g01290.t01 Wine grape mitochondrion 17.65 30.47
PGSC0003DMT400070666 Potato plastid 62.9 29.83
Zm00001d039672_P001 Maize plasma membrane 34.39 29.69
TraesCS3D01G395600.1 Wheat endoplasmic reticulum, vacuole 28.51 28.9
CDX69430 Canola extracellular 30.77 28.45
Solyc07g006480.2.1 Tomato plasma membrane 81.9 27.72
KXG33866 Sorghum cytosol 30.77 27.64
TraesCS3A01G401300.1 Wheat cytosol 29.86 27.5
TraesCS3D01G395900.1 Wheat extracellular, golgi, plasma membrane 30.77 26.88
CDX85492 Canola plasma membrane 31.67 26.12
TraesCS3D01G395100.1 Wheat extracellular, plasma membrane 30.77 26.05
CDY38095 Canola plasma membrane 31.22 26.04
TraesCS3D01G395700.1 Wheat plasma membrane 31.67 26.02
TraesCS3D01G396100.1 Wheat plasma membrane 31.22 25.94
TraesCS3B01G434100.1 Wheat plasma membrane 31.67 25.93
CDY38092 Canola plasma membrane 31.22 25.75
TraesCS3B01G434200.1 Wheat plasma membrane 31.67 25.64
TraesCS3A01G400800.1 Wheat extracellular 30.77 25.56
TraesCS3B01G434000.1 Wheat plasma membrane 29.86 25.29
HORVU3Hr1G090040.1 Barley extracellular, plasma membrane 28.51 25.2
Os01t0891601-01 Rice extracellular, golgi, plasma membrane 28.96 24.81
TraesCS3B01G433700.1 Wheat plasma membrane 29.41 24.62
TraesCS3A01G401200.1 Wheat plasma membrane 29.86 24.44
TraesCS7A01G410600.1 Wheat extracellular 28.96 24.43
TraesCS3D01G395400.1 Wheat extracellular, golgi, plasma membrane 26.7 24.08
TraesCS3B01G433800.1 Wheat extracellular 23.98 23.56
Bra001255.1-P Field mustard plasma membrane 27.6 23.55
CDY07991 Canola plasma membrane 27.6 23.55
TraesCS3A01G401100.1 Wheat extracellular, plasma membrane 29.86 23.0
TraesCS3A01G400700.1 Wheat extracellular, plasma membrane 27.15 22.47
Bra040380.1-P Field mustard extracellular 23.08 21.7
PGSC0003DMT400093490 Potato extracellular 25.34 20.97
CDY16992 Canola cytosol, plasma membrane, plastid 18.1 19.9
Bra006366.1-P Field mustard mitochondrion 28.96 19.69
TraesCS3A01G400900.1 Wheat extracellular, plasma membrane 24.89 19.23
CDX70708 Canola extracellular, plasma membrane, vacuole 30.77 18.99
TraesCS3B01G433900.1 Wheat extracellular, mitochondrion, nucleus, plasma membrane 25.79 18.45
PGSC0003DMT400071183 Potato plasma membrane 51.13 18.43
PGSC0003DMT400075494 Potato plasma membrane 48.42 18.38
TraesCS3D01G395800.1 Wheat plastid 29.41 18.31
PGSC0003DMT400075495 Potato plasma membrane 47.51 17.86
GSMUA_Achr9P08150_001 Banana cytosol, nucleus, plastid 28.51 15.71
Zm00001d007277_P001 Maize plasma membrane 39.82 14.99
EES09539 Sorghum plasma membrane 40.27 14.74
TraesCS4B01G086300.1 Wheat plasma membrane 39.82 14.52
TraesCS4D01G084000.1 Wheat plasma membrane 39.37 14.36
Bra020705.1-P Field mustard plasma membrane 35.75 14.31
HORVU4Hr1G014760.3 Barley plasma membrane 38.91 14.19
TraesCS4A01G229800.1 Wheat plasma membrane 38.91 14.19
HORVU1Hr1G064780.1 Barley plasma membrane 35.75 13.08
TraesCS1A01G259600.1 Wheat plasma membrane 35.75 13.06
EES19530 Sorghum plasma membrane 35.75 13.04
TraesCS1D01G259400.1 Wheat plasma membrane 35.29 12.91
TraesCS1B01G269900.1 Wheat plasma membrane 35.29 12.89
Zm00001d038195_P001 Maize plasma membrane 36.65 12.86
CDY05685 Canola plasma membrane 36.2 12.8
PGSC0003DMT400017876 Potato plasma membrane 35.29 12.75
CDY48749 Canola plasma membrane 35.75 12.68
PGSC0003DMT400058291 Potato plasma membrane 34.84 12.52
AT5G48380.1 Thale cress plasma membrane 34.84 12.42
PGSC0003DMT400003278 Potato plasma membrane 33.03 12.15
CDX85334 Canola plasma membrane 33.94 12.04
Bra037490.1-P Field mustard plastid 19.46 9.19
CDX86309 Canola golgi, mitochondrion, plasma membrane, plastid 18.55 8.76
GSMUA_Achr2P05730_001 Banana cytosol, peroxisome, plasma membrane 10.41 5.5
KRH42000 Soybean vacuole 5.88 3.37
Bra038824.1-P Field mustard cytosol 1.36 0.91
PGSC0003DMT400070694 Potato cytosol 0.45 0.47
GSMUA_Achr6P28640_001 Banana plastid 0.45 0.43
Os01t0891300-01 Rice plasma membrane, plastid 0.45 0.28
Protein Annotations
EnsemblPlants:PGSC0003DMT400070667EnsemblPlantsGene:PGSC0003DMG400027470Gene3D:3.80.10.10GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:IPR032675InterPro:LRR_dom_sfPANTHER:PTHR44101PANTHER:PTHR44101:SF1PGSC:PGSC0003DMG400027470SUPFAM:SSF52058
TMHMM:TMhelixUniParc:UPI0002966E6DUniProt:M1CMI4MapMan:35.1::
Description
ATP binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400027470]
Coordinates
chr7:-:1886905..1887570
Molecular Weight (calculated)
24270.6 Da
IEP (calculated)
8.750
GRAVY (calculated)
0.102
Length
221 amino acids
Sequence
(BLAST)
001: MGLKGEFPRG IENCTSITSL DLSSNELYGT IPSDISKLIR FTITLDLSSN QFSGAIPSDI ANCSFLNSLR LDNNKLQGPI PPEIALLGRL KNFNVANNML
101: VGPVPRFINS TFPAESYANN PGLCGPPLEL CGTKHVGFML STVLNRRVQF ACGFVTGWSL FTVLGIYLFF FGLPGVKKML LFINKRTKVM VIDGNESPRG
201: EEVNNDPKVN ITLAFNRLFS Q
Best Arabidopsis Sequence Match ( AT5G48380.1 )
(BLAST)
001: MMMGRLVFVI WLYNCLCLLL LSSLVDADQA NIDCLRTFKS QVEDPNRYLS TWVFGNETAG YICKFSGVTC WHDDENRVLS IKLSGYGLRG VFPPAVKLCA
101: DLTGLDLSRN NFSGPLPANI STLIPLVTIL DLSYNSFSGE IPMLISNITF LNTLMLQHNQ FTGTLPPQLA QLGRLKTFSV SDNRLVGPIP NFNQTLQFKQ
201: ELFANNLDLC GKPLDDCKSA SSSRGKVVII AAVGGLTAAA LVVGVVLFFY FRKLGAVRKK QDDPEGNRWA KSLKGQKGVK VFMFKKSVSK MKLSDLMKAT
301: EEFKKDNIIA TGRTGTMYKG RLEDGSLLMI KRLQDSQRSE KEFDAEMKTL GSVKNRNLVP LLGYCVANKE RLLMYEYMAN GYLYDQLHPA DEESFKPLDW
401: PSRLKIAIGT AKGLAWLHHS CNPRIIHRNI SSKCILLTAE FEPKISDFGL ARLMNPIDTH LSTFVNGEFG DFGYVAPEYS RTMVATPKGD VYSFGVVLLE
501: LVTGQKATSV TKVSEEKAEE ENFKGNLVEW ITKLSSESKL QEAIDRSLLG NGVDDEIFKV LKVACNCVLP EIAKQRPTMF EVYQLLRAIG ESYNFTADDD
601: ILIPSESGEG DFIEELIVAR
Arabidopsis Description
BIR1Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASS4]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.