Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G395900.1 | Wheat | extracellular, golgi, plasma membrane | 72.8 | 75.1 |
| TraesCS3A01G401300.1 | Wheat | cytosol | 67.43 | 73.33 |
| TraesCS3B01G434200.1 | Wheat | plasma membrane | 76.63 | 73.26 |
| TraesCS3B01G434100.1 | Wheat | plasma membrane | 73.18 | 70.74 |
| TraesCS3B01G433700.1 | Wheat | plasma membrane | 61.3 | 60.61 |
| TraesCS3B01G433800.1 | Wheat | extracellular | 41.0 | 47.56 |
| TraesCS3B01G433900.1 | Wheat | extracellular, mitochondrion, nucleus, plasma membrane | 55.56 | 46.93 |
| Os01t0891700-01 | Rice | plasma membrane | 54.02 | 46.08 |
| TraesCS2B01G364300.1 | Wheat | extracellular | 33.72 | 40.18 |
| CDX69430 | Canola | extracellular | 36.78 | 40.17 |
| CDY38095 | Canola | plasma membrane | 39.46 | 38.87 |
| CDX85492 | Canola | plasma membrane | 39.08 | 38.06 |
| CDY38092 | Canola | plasma membrane | 39.08 | 38.06 |
| CDY07991 | Canola | plasma membrane | 36.4 | 36.68 |
| Bra040380.1-P | Field mustard | extracellular | 32.95 | 36.6 |
| CDY16992 | Canola | cytosol, plasma membrane, plastid | 27.97 | 36.32 |
| Bra001255.1-P | Field mustard | plasma membrane | 35.63 | 35.91 |
| TraesCS5B01G161200.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 32.95 | 30.28 |
| Bra006366.1-P | Field mustard | mitochondrion | 37.55 | 30.15 |
| PGSC0003DMT400070667 | Potato | cytosol | 25.29 | 29.86 |
| CDX70708 | Canola | extracellular, plasma membrane, vacuole | 39.85 | 29.05 |
| VIT_05s0094g01290.t01 | Wine grape | mitochondrion | 13.03 | 26.56 |
| TraesCS1B01G269900.1 | Wheat | plasma membrane | 55.56 | 23.97 |
| TraesCS4B01G086300.1 | Wheat | plasma membrane | 44.06 | 18.98 |
| PGSC0003DMT400070664 | Potato | cytosol, plasma membrane, plastid | 26.05 | 18.43 |
| VIT_00s0220g00120.t01 | Wine grape | plasma membrane | 42.53 | 17.87 |
| PGSC0003DMT400075494 | Potato | plasma membrane | 39.85 | 17.87 |
| PGSC0003DMT400075495 | Potato | plasma membrane | 39.85 | 17.69 |
| PGSC0003DMT400071183 | Potato | plasma membrane | 41.38 | 17.62 |
| Solyc06g082920.2.1 | Tomato | plasma membrane | 40.61 | 17.29 |
| PGSC0003DMT400070657 | Potato | peroxisome, plasma membrane, plastid | 26.05 | 16.96 |
| VIT_00s2085g00010.t01 | Wine grape | plasma membrane | 38.7 | 16.32 |
| CDY48749 | Canola | plasma membrane | 38.7 | 16.21 |
| CDX85334 | Canola | plasma membrane | 38.31 | 16.05 |
| CDY05685 | Canola | plasma membrane | 38.31 | 16.0 |
| AT5G48380.1 | Thale cress | plasma membrane | 37.93 | 15.97 |
| GSMUA_Achr9P08150_001 | Banana | cytosol, nucleus, plastid | 23.75 | 15.46 |
| Solyc07g006480.2.1 | Tomato | plasma membrane | 36.78 | 14.7 |
| Bra020705.1-P | Field mustard | plasma membrane | 29.5 | 13.95 |
| Solyc12g096710.1.1 | Tomato | plasma membrane | 38.7 | 12.52 |
| GSMUA_Achr2P05730_001 | Banana | cytosol, peroxisome, plasma membrane | 16.48 | 10.29 |
| PGSC0003DMT400070666 | Potato | plastid | 16.86 | 9.44 |
| Bra037490.1-P | Field mustard | plastid | 13.03 | 7.26 |
| CDX86309 | Canola | golgi, mitochondrion, plasma membrane, plastid | 12.26 | 6.84 |
| GSMUA_Achr6P28640_001 | Banana | plastid | 2.68 | 2.98 |
| Solyc12g096720.1.1 | Tomato | cytosol | 1.15 | 2.11 |
| TraesCS2B01G364400.1 | Wheat | vacuole | 1.92 | 1.93 |
| Bra038824.1-P | Field mustard | cytosol | 2.3 | 1.81 |
| KRH21660 | Soybean | cytosol | 0.38 | 0.63 |
| PGSC0003DMT400070694 | Potato | cytosol | 0.38 | 0.47 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G434000.1 | EnsemblPlantsGene:TraesCS3B01G434000 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | PANTHER:PTHR44101 | PANTHER:PTHR44101:SF3 |
| PFAM:PF00560 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF52058 | TMHMM:TMhelix | MapMan:35.1 |
Description
No Description!
Coordinates
chr3B:-:672718850..672719635
Molecular Weight (calculated)
29108.0 Da
IEP (calculated)
5.554
GRAVY (calculated)
0.061
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MADDTKFLLL FFLLSSSLLC FGSEHDIQCL KSVQQSVIDT DGVLKSTWNF EHETDGFICQ FAGVECWHPD ENRVLSLRLD NLGLEGPFPQ GLQYCSSMTG
101: LNLSNNKFSG PMPTDISRQL QQLTSLDLSH NSFSGSIPPS ITNMIYLNLL NLQHNQLSSQ IPSQLDLLTR LTTFNVAENL LSGPVPRSLA VFPASNFDGN
201: QGLCDSPLGE CSRKRWMPIR INDMSSIRAA VGFVLGFVVA FYFPHCFVCS ERLRAYVVRI I
101: LNLSNNKFSG PMPTDISRQL QQLTSLDLSH NSFSGSIPPS ITNMIYLNLL NLQHNQLSSQ IPSQLDLLTR LTTFNVAENL LSGPVPRSLA VFPASNFDGN
201: QGLCDSPLGE CSRKRWMPIR INDMSSIRAA VGFVLGFVVA FYFPHCFVCS ERLRAYVVRI I
001: MKEIGSKPRK LLPLCFIIFL CFCSSVMAAD EDDIRCLRGL KASLTDPQNA LKSWNFDNTT LGFLCNFVGV SCWNNQENRV INLELRDMGL SGKIPDSLQY
101: CASLQKLDLS SNRLSGNIPT ELCNWLPFLV SLDLSNNELN GEIPPDLAKC SFVNSLVLSD NRLSGQIPVQ FSALGRLGRF SVANNDLSGR IPVFFSSPSY
201: SSDDFSGNKG LCGRPLSSSC GGLSKKNLGI IIAAGVFGAA ASMLLAFGIW WYYHLKWTRR RRSGLTEVGV SGLAQRLRSH KLTQVSLFQK PLVKVKLGDL
301: MAATNNFNSE NIIVSTRTGT TYKALLPDGS ALAVKHLSTC KLGEREFRYE MNQLWELRHS NLAPLLGFCV VEEEKFLVYK YMSNGTLHSL LDSNRGELDW
401: STRFRIGLGA ARGLAWLHHG CRPPILHQNI CSSVILIDED FDARIIDSGL ARLMVPSDNN ESSFMTGDLG EFGYVAPEYS TTMLASLKGD VYGLGVVLLE
501: LATGLKAVGG EGFKGSLVDW VKQLESSGRI AETFDENIRG KGHDEEISKF VEIALNCVSS RPKERWSMFQ AYQSLKAIAE KQGYSFSEQD DDFPLIFDTQ
601: ENEKV
101: CASLQKLDLS SNRLSGNIPT ELCNWLPFLV SLDLSNNELN GEIPPDLAKC SFVNSLVLSD NRLSGQIPVQ FSALGRLGRF SVANNDLSGR IPVFFSSPSY
201: SSDDFSGNKG LCGRPLSSSC GGLSKKNLGI IIAAGVFGAA ASMLLAFGIW WYYHLKWTRR RRSGLTEVGV SGLAQRLRSH KLTQVSLFQK PLVKVKLGDL
301: MAATNNFNSE NIIVSTRTGT TYKALLPDGS ALAVKHLSTC KLGEREFRYE MNQLWELRHS NLAPLLGFCV VEEEKFLVYK YMSNGTLHSL LDSNRGELDW
401: STRFRIGLGA ARGLAWLHHG CRPPILHQNI CSSVILIDED FDARIIDSGL ARLMVPSDNN ESSFMTGDLG EFGYVAPEYS TTMLASLKGD VYGLGVVLLE
501: LATGLKAVGG EGFKGSLVDW VKQLESSGRI AETFDENIRG KGHDEEISKF VEIALNCVSS RPKERWSMFQ AYQSLKAIAE KQGYSFSEQD DDFPLIFDTQ
601: ENEKV
Arabidopsis Description
BIR2Inactive LRR receptor-like serine/threonine-protein kinase BIR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSI9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.