Factsheet for TraesCS4B01G086300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
golgi 4
plasma membrane 6
endoplasmic reticulum 4
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS2A01G343100.1
TraesCS2B01G340700.1
TraesCS2D01G321400.1
TraesCS6A01G203600.2
TraesCS6B01G223700.3
TraesCS6D01G186900.2
TraesCS7A01G293300.3
TraesCS7B01G182300.1
TraesCS7D01G291200.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48380.1	TraesCS2A01G343100.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS2B01G340700.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS2D01G321400.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS6A01G203600.2	AT1G71830.1	19616764
AT5G48380.1	TraesCS6B01G223700.3	AT1G71830.1	19616764
AT5G48380.1	TraesCS6D01G186900.2	AT1G71830.1	19616764
AT5G48380.1	TraesCS7A01G293300.3	AT1G71830.1	19616764
AT5G48380.1	TraesCS7B01G182300.1	AT1G71830.1	19616764
AT5G48380.1	TraesCS7D01G291200.3	AT1G71830.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G084000.1	Wheat	plasma membrane	97.19	97.19
HORVU4Hr1G014760.3	Barley	plasma membrane	96.86	96.86
TraesCS4A01G229800.1	Wheat	plasma membrane	96.37	96.37
Os11t0249900-01	Rice	plasma membrane	71.45	86.43
EES09539	Sorghum	plasma membrane	84.49	84.77
Zm00001d007277_P001	Maize	plasma membrane	80.69	83.3
GSMUA_Achr6P28640_001	Banana	plastid	31.35	80.85
GSMUA_Achr9P08150_001	Banana	cytosol, nucleus, plastid	48.35	73.07
Zm00001d039672_P001	Maize	plasma membrane	30.86	73.05
TraesCS1B01G269900.1	Wheat	plasma membrane	66.34	66.45
Bra038824.1-P	Field mustard	cytosol	35.31	64.65
GSMUA_Achr2P05730_001	Banana	cytosol, peroxisome, plasma membrane	44.06	63.88
VIT_00s0220g00120.t01	Wine grape	plasma membrane	62.71	61.19
PGSC0003DMT400071183	Potato	plasma membrane	60.56	59.87
Solyc06g082920.2.1	Tomato	plasma membrane	60.56	59.87
Bra037490.1-P	Field mustard	plastid	46.04	59.62
CDX86309	Canola	golgi, mitochondrion, plasma membrane, plastid	45.71	59.19
VIT_00s2085g00010.t01	Wine grape	plasma membrane	59.08	57.84
Bra020705.1-P	Field mustard	plasma membrane	52.64	57.79
AT5G48380.1	Thale cress	plasma membrane	58.42	57.1
CDX85334	Canola	plasma membrane	56.93	55.38
CDY48749	Canola	plasma membrane	56.77	55.22
CDY05685	Canola	plasma membrane	56.11	54.4
TraesCS3B01G434100.1	Wheat	plasma membrane	21.45	48.15
TraesCS3B01G434200.1	Wheat	plasma membrane	20.96	46.52
TraesCS2B01G364400.1	Wheat	vacuole	19.64	45.95
TraesCS3B01G434000.1	Wheat	plasma membrane	18.98	44.06
TraesCS3B01G433700.1	Wheat	plasma membrane	19.14	43.94
Solyc12g096720.1.1	Tomato	cytosol	9.74	41.55
PGSC0003DMT400070664	Potato	cytosol, plasma membrane, plastid	25.08	41.19
PGSC0003DMT400070657	Potato	peroxisome, plasma membrane, plastid	26.9	40.65
TraesCS3B01G433800.1	Wheat	extracellular	15.02	40.44
PGSC0003DMT400070667	Potato	cytosol	14.52	39.82
PGSC0003DMT400075495	Potato	plasma membrane	38.61	39.8
CDX69430	Canola	extracellular	15.68	39.75
TraesCS2B01G364300.1	Wheat	extracellular	13.86	38.36
PGSC0003DMT400075494	Potato	plasma membrane	36.14	37.63
TraesCS3B01G433900.1	Wheat	extracellular, mitochondrion, nucleus, plasma membrane	19.14	37.54
CDY38095	Canola	plasma membrane	16.17	36.98
CDY38092	Canola	plasma membrane	16.34	36.94
CDY07991	Canola	plasma membrane	15.68	36.68
CDX85492	Canola	plasma membrane	16.17	36.57
CDY16992	Canola	cytosol, plasma membrane, plastid	12.05	36.32
Bra001255.1-P	Field mustard	plasma membrane	15.18	35.52
PGSC0003DMT400070666	Potato	plastid	27.23	35.41
PGSC0003DMT400070694	Potato	cytosol	12.38	35.38
Solyc07g006480.2.1	Tomato	plasma membrane	37.79	35.07
TraesCS5B01G161200.1	Wheat	endoplasmic reticulum, extracellular, plasma membrane	16.01	34.15
Bra040380.1-P	Field mustard	extracellular	13.2	34.04
VIT_05s0094g01290.t01	Wine grape	mitochondrion	6.93	32.81
Solyc12g096710.1.1	Tomato	plasma membrane	38.94	29.24
Bra006366.1-P	Field mustard	mitochondrion	14.85	27.69
CDX70708	Canola	extracellular, plasma membrane, vacuole	16.17	27.37

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.10.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF07714	PFAM:PF08263	PFAM:PF13516	PFAM:PF13855
PFscan:PS50011	PANTHER:PTHR44101	PANTHER:PTHR44101:SF3	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112
InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4B01G086300	EnsemblPlants:TraesCS4B01G086300.1	TIGR:cd12087
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:86139667..86142070

Molecular Weight (calculated)

66724.3 Da

IEP (calculated)

7.414

GRAVY (calculated)

-0.133

Length

606 amino acids

Sequence
(BLAST)

001: MAIRCFYAAL VQILLCLMLC QPCYSTVTDI QCLKRLKASV DPNNKLHWTF DDNKEGSICS FNGVECWHPN ENRILSLRLS SMDLKGQFPD GLENCSSMTS
101: LDLSSNSLSG PIPVDISKRL PYITNLDLSY NSFSGEIPES LANCTYLNVV SLQNNKLTGA IPGQFAGLSR LTEFNVANNK LSGQIPSSLS KFSSSNFANQ
201: DLCGKPLSGD CTASSSSRTG VIAGSAVAGA VITLIIVGVI LFIFLRKMPA TKKEKDLEEN KWAKSIKGAK GVKVSMFEKS VSKMKLNDLM TATGDFTKEN
301: IIGTVHSGTM YKATLPDGSF LAIKRLQETQ HSESQFTSEM STLGSARQRN LVPLLGYCIA KKERLLVYKY MPKGSLYDQL HHEGSDREAL EWPMRLKIAI
401: GAGRGLAWLH HSCNPRILHR NISSKCILLD DDYEPKISDF GLARLMNPID THLSTFVNGE FGDLGYVAPE YTHTLVATPK GDVYSFGVVL LEMVTGEEPT
501: RVSKAPENFK GSLVDWITYL SNNSILQDAV DKSLIGKNND AELLQVLKVA CSCVLSAPKE RPTMFEVYQL LRAVGEKYHF SAADDELALR PQDADSKKLD
601: ELIVAK

Best Arabidopsis Sequence Match ( AT5G48380.1 )
(BLAST)

001: MMMGRLVFVI WLYNCLCLLL LSSLVDADQA NIDCLRTFKS QVEDPNRYLS TWVFGNETAG YICKFSGVTC WHDDENRVLS IKLSGYGLRG VFPPAVKLCA
101: DLTGLDLSRN NFSGPLPANI STLIPLVTIL DLSYNSFSGE IPMLISNITF LNTLMLQHNQ FTGTLPPQLA QLGRLKTFSV SDNRLVGPIP NFNQTLQFKQ
201: ELFANNLDLC GKPLDDCKSA SSSRGKVVII AAVGGLTAAA LVVGVVLFFY FRKLGAVRKK QDDPEGNRWA KSLKGQKGVK VFMFKKSVSK MKLSDLMKAT
301: EEFKKDNIIA TGRTGTMYKG RLEDGSLLMI KRLQDSQRSE KEFDAEMKTL GSVKNRNLVP LLGYCVANKE RLLMYEYMAN GYLYDQLHPA DEESFKPLDW
401: PSRLKIAIGT AKGLAWLHHS CNPRIIHRNI SSKCILLTAE FEPKISDFGL ARLMNPIDTH LSTFVNGEFG DFGYVAPEYS RTMVATPKGD VYSFGVVLLE
501: LVTGQKATSV TKVSEEKAEE ENFKGNLVEW ITKLSSESKL QEAIDRSLLG NGVDDEIFKV LKVACNCVLP EIAKQRPTMF EVYQLLRAIG ESYNFTADDD
601: ILIPSESGEG DFIEELIVAR

Arabidopsis Description

BIR1Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.