Factsheet for PGSC0003DMT400070694

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400070819

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48380.1	PGSC0003DMT400070819	AT1G71830.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400070666	Potato	plastid	91.04	41.42
PGSC0003DMT400070657	Potato	peroxisome, plasma membrane, plastid	77.83	41.15
GSMUA_Achr6P28640_001	Banana	plastid	36.32	32.77
Solyc07g006480.2.1	Tomato	plasma membrane	90.57	29.4
Bra038824.1-P	Field mustard	cytosol	36.79	23.57
PGSC0003DMT400075494	Potato	plasma membrane	48.58	17.7
PGSC0003DMT400075495	Potato	plasma membrane	48.58	17.52
GSMUA_Achr2P05730_001	Banana	cytosol, peroxisome, plasma membrane	32.55	16.51
GSMUA_Achr9P08150_001	Banana	cytosol, nucleus, plastid	31.13	16.46
CDX86309	Canola	golgi, mitochondrion, plasma membrane, plastid	35.85	16.24
Bra037490.1-P	Field mustard	plastid	35.85	16.24
PGSC0003DMT400070664	Potato	cytosol, plasma membrane, plastid	27.83	15.99
KRH42000	Soybean	vacuole	28.77	15.8
Bra020705.1-P	Field mustard	plasma membrane	36.79	14.13
EES19530	Sorghum	plasma membrane	38.21	13.37
Zm00001d007277_P001	Maize	plasma membrane	35.85	12.95
HORVU1Hr1G064780.1	Barley	plasma membrane	36.79	12.91
TraesCS1B01G269900.1	Wheat	plasma membrane	36.79	12.89
PGSC0003DMT400071183	Potato	plasma membrane	37.26	12.89
EES09539	Sorghum	plasma membrane	36.32	12.75
TraesCS1D01G259400.1	Wheat	plasma membrane	36.32	12.75
AT5G48380.1	Thale cress	plasma membrane	37.26	12.74
TraesCS1A01G259600.1	Wheat	plasma membrane	36.32	12.73
CDX85334	Canola	plasma membrane	37.26	12.68
HORVU4Hr1G014760.3	Barley	plasma membrane	35.85	12.54
TraesCS4A01G229800.1	Wheat	plasma membrane	35.85	12.54
TraesCS4D01G084000.1	Wheat	plasma membrane	35.85	12.54
CDY48749	Canola	plasma membrane	36.79	12.52
CDY05685	Canola	plasma membrane	36.79	12.48
TraesCS4B01G086300.1	Wheat	plasma membrane	35.38	12.38
Zm00001d038195_P001	Maize	plasma membrane	36.32	12.22
PGSC0003DMT400003278	Potato	plasma membrane	30.19	10.65
PGSC0003DMT400017876	Potato	plasma membrane	30.19	10.46
PGSC0003DMT400058291	Potato	plasma membrane	30.19	10.41
VIT_05s0094g01290.t01	Wine grape	mitochondrion	2.83	4.69
TraesCS3A01G401000.1	Wheat	cytosol	2.36	2.91
Os01t0891601-01	Rice	extracellular, golgi, plasma membrane	2.83	2.33
PGSC0003DMT400093490	Potato	extracellular	2.83	2.25
CDX69430	Canola	extracellular	2.36	2.09
CDY16992	Canola	cytosol, plasma membrane, plastid	1.89	1.99
CDY38095	Canola	plasma membrane	2.36	1.89
CDY38092	Canola	plasma membrane	2.36	1.87
CDX85492	Canola	plasma membrane	2.36	1.87
KXG33866	Sorghum	cytosol	1.42	1.22
HORVU3Hr1G090040.1	Barley	extracellular, plasma membrane	1.42	1.2
TraesCS3D01G395100.1	Wheat	extracellular, plasma membrane	1.42	1.15
TraesCS7A01G410600.1	Wheat	extracellular	1.42	1.15
TraesCS3B01G433700.1	Wheat	plasma membrane	1.42	1.14
TraesCS3A01G400800.1	Wheat	extracellular	1.42	1.13
TraesCS3A01G400700.1	Wheat	extracellular, plasma membrane	1.42	1.12
TraesCS3B01G434100.1	Wheat	plasma membrane	1.42	1.11
TraesCS3A01G400900.1	Wheat	extracellular, plasma membrane	1.42	1.05
TraesCS3A01G401100.1	Wheat	extracellular, plasma membrane	1.42	1.05
TraesCS3B01G433900.1	Wheat	extracellular, mitochondrion, nucleus, plasma membrane	1.42	0.97
Bra006366.1-P	Field mustard	mitochondrion	1.42	0.92
TraesCS3D01G395800.1	Wheat	plastid	1.42	0.85
CDX70708	Canola	extracellular, plasma membrane, vacuole	1.42	0.84
TraesCS3A01G401300.1	Wheat	cytosol	0.94	0.83
TraesCS3D01G395400.1	Wheat	extracellular, golgi, plasma membrane	0.94	0.82
TraesCS3D01G396100.1	Wheat	plasma membrane	0.94	0.75
TraesCS3D01G395700.1	Wheat	plasma membrane	0.94	0.74
TraesCS3A01G401200.1	Wheat	plasma membrane	0.94	0.74
TraesCS3B01G434200.1	Wheat	plasma membrane	0.94	0.73
TraesCS3D01G395600.1	Wheat	endoplasmic reticulum, vacuole	0.47	0.46
PGSC0003DMT400070667	Potato	cytosol	0.47	0.45
Bra040380.1-P	Field mustard	extracellular	0.47	0.43
TraesCS3D01G395900.1	Wheat	extracellular, golgi, plasma membrane	0.47	0.4
Zm00001d039672_P001	Maize	plasma membrane	0.47	0.39
CDY07991	Canola	plasma membrane	0.47	0.39
Bra001255.1-P	Field mustard	plasma membrane	0.47	0.39
TraesCS3B01G434000.1	Wheat	plasma membrane	0.47	0.38
TraesCS3B01G433800.1	Wheat	extracellular	0.0	0.0
PGSC0003DMT400085762	Potato	extracellular	0.0	0.0
Os01t0891300-01	Rice	plasma membrane, plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M1CMJ8	PFAM:PF07714	EnsemblPlantsGene:PGSC0003DMG400027482	PGSC:PGSC0003DMG400027482	EnsemblPlants:PGSC0003DMT400070694	PFscan:PS50011
PANTHER:PTHR44101	PANTHER:PTHR44101:SF1	InterPro:Prot_kinase_dom	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI000294F194
SEG:seg	:	:	:	:	:

Description

Serine-threonine protein kinase, plant-type [Source:PGSC_GENE;Acc:PGSC0003DMG400027482]

Coordinates

chr7:-:1885719..1886443

Molecular Weight (calculated)

23955.7 Da

IEP (calculated)

5.813

GRAVY (calculated)

-0.132

Length

212 amino acids

Sequence
(BLAST)

001: MPNGNLHEWL HSTDDKARLL DFPLRVKIVL GVAKALTWLH DGGNFHVVHG NISTQCILLD ENFDPKLSNF WEATLAKTND IDSNLSLFPI VECLDFTTYK
101: KDVYRFGVVL LELLTRKESY ILSCSSLNLS SSSFASPLDV DKVLLGQGFD NMVMQLLELA SDCMKFIPDQ RPTMQQVYQT VAAIARVHDQ TGGSEIQLHL
201: DYKQGRSHQR DV

Best Arabidopsis Sequence Match ( AT5G48380.1 )
(BLAST)

001: MMMGRLVFVI WLYNCLCLLL LSSLVDADQA NIDCLRTFKS QVEDPNRYLS TWVFGNETAG YICKFSGVTC WHDDENRVLS IKLSGYGLRG VFPPAVKLCA
101: DLTGLDLSRN NFSGPLPANI STLIPLVTIL DLSYNSFSGE IPMLISNITF LNTLMLQHNQ FTGTLPPQLA QLGRLKTFSV SDNRLVGPIP NFNQTLQFKQ
201: ELFANNLDLC GKPLDDCKSA SSSRGKVVII AAVGGLTAAA LVVGVVLFFY FRKLGAVRKK QDDPEGNRWA KSLKGQKGVK VFMFKKSVSK MKLSDLMKAT
301: EEFKKDNIIA TGRTGTMYKG RLEDGSLLMI KRLQDSQRSE KEFDAEMKTL GSVKNRNLVP LLGYCVANKE RLLMYEYMAN GYLYDQLHPA DEESFKPLDW
401: PSRLKIAIGT AKGLAWLHHS CNPRIIHRNI SSKCILLTAE FEPKISDFGL ARLMNPIDTH LSTFVNGEFG DFGYVAPEYS RTMVATPKGD VYSFGVVLLE
501: LVTGQKATSV TKVSEEKAEE ENFKGNLVEW ITKLSSESKL QEAIDRSLLG NGVDDEIFKV LKVACNCVLP EIAKQRPTMF EVYQLLRAIG ESYNFTADDD
601: ILIPSESGEG DFIEELIVAR

Arabidopsis Description

BIR1Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.