Factsheet for PGSC0003DMT400071183

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400070819

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48380.1	PGSC0003DMT400070819	AT1G71830.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g082920.2.1	Tomato	plasma membrane	95.43	95.43
GSMUA_Achr6P28640_001	Banana	plastid	28.39	74.04
KRG88547	Soybean	cytosol	38.66	72.92
KRH37646	Soybean	cytosol	28.87	72.54
VIT_00s2085g00010.t01	Wine grape	plasma membrane	70.31	69.63
GSMUA_Achr9P08150_001	Banana	cytosol, nucleus, plastid	45.35	69.33
Bra038824.1-P	Field mustard	cytosol	37.19	68.88
KRH66277	Soybean	plasma membrane	50.24	68.29
KRH66274	Soybean	plasma membrane	50.08	68.07
KRH07291	Soybean	plasma membrane	66.23	66.12
KRH66275	Soybean	mitochondrion, plasma membrane	26.59	65.46
KRH00983	Soybean	nucleus, plasma membrane	65.58	65.05
KRH40243	Soybean	plasma membrane	64.76	64.34
CDX86309	Canola	golgi, mitochondrion, plasma membrane, plastid	48.29	63.25
Bra037490.1-P	Field mustard	plastid	48.29	63.25
KRH66278	Soybean	cytosol	46.17	61.66
EES09539	Sorghum	plasma membrane	60.2	61.09
HORVU4Hr1G014760.3	Barley	plasma membrane	60.03	60.73
Bra020705.1-P	Field mustard	plasma membrane	54.65	60.69
TraesCS4B01G086300.1	Wheat	plasma membrane	59.87	60.56
TraesCS4D01G084000.1	Wheat	plasma membrane	59.87	60.56
Zm00001d007277_P001	Maize	plasma membrane	57.91	60.48
TraesCS4A01G229800.1	Wheat	plasma membrane	59.54	60.23
HORVU1Hr1G064780.1	Barley	plasma membrane	58.89	59.77
TraesCS1B01G269900.1	Wheat	plasma membrane	58.56	59.34
TraesCS1A01G259600.1	Wheat	plasma membrane	58.56	59.34
TraesCS1D01G259400.1	Wheat	plasma membrane	58.4	59.27
EES19530	Sorghum	plasma membrane	58.56	59.24
AT5G48380.1	Thale cress	plasma membrane	59.87	59.19
CDX85334	Canola	plasma membrane	59.71	58.75
GSMUA_Achr2P05730_001	Banana	cytosol, peroxisome, plasma membrane	39.97	58.61
CDY48749	Canola	plasma membrane	59.38	58.43
CDY05685	Canola	plasma membrane	59.38	58.24
Zm00001d038195_P001	Maize	plasma membrane	59.22	57.62
PGSC0003DMT400070667	Potato	cytosol	18.43	51.13
PGSC0003DMT400085762	Potato	extracellular	16.48	48.1
TraesCS3D01G395600.1	Wheat	endoplasmic reticulum, vacuole	16.64	46.79
PGSC0003DMT400070664	Potato	cytosol, plasma membrane, plastid	27.9	46.34
PGSC0003DMT400070657	Potato	peroxisome, plasma membrane, plastid	30.18	46.13
Zm00001d039672_P001	Maize	plasma membrane	19.25	46.09
PGSC0003DMT400075495	Potato	plasma membrane	42.25	44.05
TraesCS3D01G395900.1	Wheat	extracellular, golgi, plasma membrane	18.11	43.87
PGSC0003DMT400003278	Potato	plasma membrane	42.58	43.43
TraesCS3A01G401300.1	Wheat	cytosol	16.97	43.33
PGSC0003DMT400017876	Potato	plasma membrane	43.23	43.3
KXG33866	Sorghum	cytosol	17.13	42.68
PGSC0003DMT400058291	Potato	plasma membrane	42.41	42.28
CDX69430	Canola	extracellular	16.48	42.26
TraesCS3B01G434100.1	Wheat	plasma membrane	18.6	42.22
TraesCS3D01G396100.1	Wheat	plasma membrane	18.27	42.11
PGSC0003DMT400075494	Potato	plasma membrane	39.8	41.92
CDY16992	Canola	cytosol, plasma membrane, plastid	13.7	41.79
TraesCS3D01G395700.1	Wheat	plasma membrane	18.27	41.64
TraesCS3D01G395400.1	Wheat	extracellular, golgi, plasma membrane	16.64	41.63
CDY38095	Canola	plasma membrane	17.94	41.51
TraesCS3B01G434000.1	Wheat	plasma membrane	17.62	41.38
TraesCS3A01G401200.1	Wheat	plasma membrane	18.11	41.11
CDX85492	Canola	plasma membrane	17.94	41.04
TraesCS3B01G433700.1	Wheat	plasma membrane	17.62	40.91
CDY38092	Canola	plasma membrane	17.78	40.67
TraesCS3B01G434200.1	Wheat	plasma membrane	18.11	40.66
TraesCS3A01G400800.1	Wheat	extracellular	17.62	40.6
PGSC0003DMT400070666	Potato	plastid	30.83	40.56
TraesCS3A01G400700.1	Wheat	extracellular, plasma membrane	17.62	40.45
TraesCS7A01G410600.1	Wheat	extracellular	17.13	40.08
TraesCS3D01G395100.1	Wheat	extracellular, plasma membrane	16.8	39.46
TraesCS3A01G401000.1	Wheat	cytosol	10.6	37.79
CDY07991	Canola	plasma membrane	15.82	37.45
PGSC0003DMT400070694	Potato	cytosol	12.89	37.26
Bra040380.1-P	Field mustard	extracellular	14.19	37.02
TraesCS3A01G401100.1	Wheat	extracellular, plasma membrane	17.29	36.93
HORVU3Hr1G090040.1	Barley	extracellular, plasma membrane	14.68	36.0
Bra001255.1-P	Field mustard	plasma membrane	15.17	35.91
TraesCS3B01G433800.1	Wheat	extracellular	13.05	35.56
PGSC0003DMT400093490	Potato	extracellular	15.01	34.46
TraesCS3A01G400900.1	Wheat	extracellular, plasma membrane	15.17	32.52
TraesCS3B01G433900.1	Wheat	extracellular, mitochondrion, nucleus, plasma membrane	16.31	32.36
TraesCS3D01G395800.1	Wheat	plastid	18.43	31.83
Bra006366.1-P	Field mustard	mitochondrion	16.64	31.38
CDX70708	Canola	extracellular, plasma membrane, vacuole	17.46	29.89

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.10.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_dom_sf	UniProt:M1CNB7	PFAM:PF00069	EnsemblPlantsGene:PGSC0003DMG400027683	PGSC:PGSC0003DMG400027683	EnsemblPlants:PGSC0003DMT400071183
PFscan:PS50011	PFscan:PS51257	PANTHER:PTHR44101	PANTHER:PTHR44101:SF1	InterPro:Prot_kinase_dom	SUPFAM:SSF52058
SUPFAM:SSF56112	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002947F41	SEG:seg	:

Description

Protein kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400027683]

Coordinates

chr6:-:57919679..57923854

Molecular Weight (calculated)

67787.0 Da

IEP (calculated)

8.201

GRAVY (calculated)

-0.135

Length

613 amino acids

Sequence
(BLAST)

001: MALDNRALTT FAAILIYLVL SCAVCSALQS DIDCLKSIKD SFEDPLKFLN TTWKFDNQTE GFICKFAGIQ CWHPDETRVL SISLPDMGLK GKFPRGLKNC
101: TSITSLDLSS NKLHGSIPND ISKIIGFMVT LDLSSNNLSG DIPVNLANCS FLNSLRLDNN QFTGQIPPEI ALLGRLKNFN VANNRLTGPV PRFINSTFPP
201: ESYANNAGLC GPPLALCEGY AKKSPTGIIV GAAVGGVTLG AVLLTIGMFF YMRKISRKRK KEDDPEGNKW AKSIKGSKAI QLSMFEKSTS KMRLSDLMKA
301: TNNFSKNNIV GSGRTGTFYK AVLDDGTSLM VKRLQNTQHS EKEFTSEMAT LGNVKHRNLV PLLGFCMAKK ERLLVYKDMP NGTLHDRLHS VSEGEKTLEW
401: PMRMKIAIGA AKGFAWLHHN CNPRIIHRNI SSKCILLDVE YEPKISDFGL ARLMNPVDTH LSTFVNGEFG DFGYVAPEYA RTLMATPKGD VYSFGVVLLE
501: LVTGETPTSV AKAPETFKGN LVEWITQLSG ESKLQDAIDH SLSSKGYDSE IFQVLKVACR CVLAAAPKER PTMFELYQLL RAIGERYHFT TDDDIMMPES
601: DSGFQMDELI VAQ

Best Arabidopsis Sequence Match ( AT5G48380.1 )
(BLAST)

001: MMMGRLVFVI WLYNCLCLLL LSSLVDADQA NIDCLRTFKS QVEDPNRYLS TWVFGNETAG YICKFSGVTC WHDDENRVLS IKLSGYGLRG VFPPAVKLCA
101: DLTGLDLSRN NFSGPLPANI STLIPLVTIL DLSYNSFSGE IPMLISNITF LNTLMLQHNQ FTGTLPPQLA QLGRLKTFSV SDNRLVGPIP NFNQTLQFKQ
201: ELFANNLDLC GKPLDDCKSA SSSRGKVVII AAVGGLTAAA LVVGVVLFFY FRKLGAVRKK QDDPEGNRWA KSLKGQKGVK VFMFKKSVSK MKLSDLMKAT
301: EEFKKDNIIA TGRTGTMYKG RLEDGSLLMI KRLQDSQRSE KEFDAEMKTL GSVKNRNLVP LLGYCVANKE RLLMYEYMAN GYLYDQLHPA DEESFKPLDW
401: PSRLKIAIGT AKGLAWLHHS CNPRIIHRNI SSKCILLTAE FEPKISDFGL ARLMNPIDTH LSTFVNGEFG DFGYVAPEYS RTMVATPKGD VYSFGVVLLE
501: LVTGQKATSV TKVSEEKAEE ENFKGNLVEW ITKLSSESKL QEAIDRSLLG NGVDDEIFKV LKVACNCVLP EIAKQRPTMF EVYQLLRAIG ESYNFTADDD
601: ILIPSESGEG DFIEELIVAR

Arabidopsis Description

BIR1Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.