CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91762
KRH35013
KRH70218

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48380.1	KRG91762	AT1G71830.1	19616764
AT5G48380.1	KRH35013	AT1G71830.1	19616764
AT5G48380.1	KRH70218	AT1G71830.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH66275	Soybean	mitochondrion, plasma membrane	37.69	69.48
KRH66274	Soybean	plasma membrane	64.05	65.19
KRH66277	Soybean	plasma membrane	63.62	64.75
KRH07291	Soybean	plasma membrane	86.06	64.33
KRG88547	Soybean	cytosol	40.96	57.85
KRH37646	Soybean	cytosol	28.32	53.28
KRH00983	Soybean	nucleus, plasma membrane	71.24	52.91
KRH40243	Soybean	plasma membrane	70.59	52.51
KRH66279	Soybean	cytosol	20.26	50.82
VIT_00s2085g00010.t01	Wine grape	plasma membrane	68.19	50.57
PGSC0003DMT400071183	Potato	plasma membrane	61.66	46.17
Solyc06g082920.2.1	Tomato	plasma membrane	60.35	45.19
Bra038824.1-P	Field mustard	cytosol	31.15	43.2
Bra020705.1-P	Field mustard	plasma membrane	51.2	42.57
AT5G48380.1	Thale cress	plasma membrane	56.21	41.61
Bra037490.1-P	Field mustard	plastid	42.27	41.45
CDY48749	Canola	plasma membrane	56.21	41.41
CDY05685	Canola	plasma membrane	55.56	40.8
CDX85334	Canola	plasma membrane	55.12	40.61
CDX86309	Canola	golgi, mitochondrion, plasma membrane, plastid	41.18	40.38
CDY38095	Canola	plasma membrane	21.13	36.6
CDX69430	Canola	extracellular	18.95	36.4
CDX85492	Canola	plasma membrane	20.91	35.82
CDY38092	Canola	plasma membrane	20.91	35.82
CDY16992	Canola	cytosol, plasma membrane, plastid	14.81	33.83
KRH18546	Soybean	extracellular	16.12	31.62
Bra040380.1-P	Field mustard	extracellular	16.12	31.49
KRH41999	Soybean	cytosol, golgi, plasma membrane	41.83	31.22
KRH42002	Soybean	plasma membrane	42.48	30.9
KRH18545	Soybean	plasma membrane	19.39	30.27
KRH21657	Soybean	cytosol	27.23	29.55
CDY07991	Canola	plasma membrane	16.56	29.34
Bra001255.1-P	Field mustard	plasma membrane	16.12	28.57
Bra006366.1-P	Field mustard	mitochondrion	19.61	27.69
CDX70708	Canola	extracellular, plasma membrane, vacuole	20.91	26.82
KRH77166	Soybean	plasma membrane	15.47	26.49
KRH28321	Soybean	extracellular, plasma membrane	15.47	26.39
KRG93454	Soybean	mitochondrion	22.0	25.57
KRH49900	Soybean	cytosol	13.73	24.71
KRH42000	Soybean	vacuole	17.43	20.73
KRH21659	Soybean	cytosol	10.24	19.92
KRH21660	Soybean	cytosol	6.54	18.87

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.80.10.10	MapMan:50.2.7	UniProt:A0A0R0KGU5	EMBL:ACUP02001935	EnsemblPlantsGene:GLYMA_03G096100
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR032675	EnsemblPlants:KRH66278	ProteinID:KRH66278	ProteinID:KRH66278.1	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf
PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR44101	PANTHER:PTHR44101:SF1	InterPro:Prot_kinase_dom	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	TMHMM:TMhelix	UniParc:UPI0006ED8BA6	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:-:28321410..28323704

Molecular Weight (calculated)

51232.7 Da

IEP (calculated)

8.470

GRAVY (calculated)

-0.196

Length

459 amino acids

Sequence
(BLAST)

001: MVEQSRTIII KESLEDPYNY LKFSRDFNNK TEGYISRFNG VECWHPDENR VLNLKLLNMG LKGQFPRGIQ NCSSLTELDL SINKLPGTIS GDIATRIPFA
101: TSVILASNEF SGEIPVSLAN CKFLNTLKLD QNRLTGQIPP QFGVLSRIKT FYVSDNLLMR PVPIFSAGVS KNYANNQGLC GGKSFAPCKA KSSKSNLVVI
201: AGAAVGGVTL ATLGLCIGLF FFVRRVSFKK KEEDPEGNKW ARSLKGTKQI KFQVKHFRFC MAKRERLLVY KNMPNGNLHD QLHHADGVST LDWTTRLKIA
301: IGAAKGLAWL HHSCNPHIIH QNISSKYILL DADFEPKISD FGLARLMKPI DTHLSTFVNE EFGDLGYVAP EYKELCFGTV LLELVTGERP TNASKAPETF
401: KGNLVEWITE LTSNAEHHDA IDESLVSKDA DSDLFQFLKV ACNCVSPTPK ERPTMFEVY

Best Arabidopsis Sequence Match ( AT1G27190.1 )
(BLAST)

001: MKKIFITLLW LLFISSFLCS SSSAEDDVLC LQGLKNSLID PSSRLSSWSF PNSSASSICK LTGVSCWNEK ENRIISLQLQ SMQLAGEIPE SLKLCRSLQS
101: LDLSGNDLSG SIPSQICSWL PYLVTLDLSG NKLGGSIPTQ IVECKFLNAL ILSDNKLSGS IPSQLSRLDR LRRLSLAGND LSGTIPSELA RFGGDDFSGN
201: NGLCGKPLSR CGALNGRNLS IIIVAGVLGA VGSLCVGLVI FWWFFIREGS RKKKGYGAGK SKDDSDWIGL LRSHKLVQVT LFQKPIVKIK LGDLMAATNN
301: FSSGNIDVSS RTGVSYKADL PDGSALAVKR LSACGFGEKQ FRSEMNKLGE LRHPNLVPLL GYCVVEDERL LVYKHMVNGT LFSQLHNGGL CDAVLDWPTR
401: RAIGVGAAKG LAWLHHGCQP PYLHQFISSN VILLDDDFDA RITDYGLAKL VGSRDSNDSS FNNGDLGELG YVAPEYSSTM VASLKGDVYG FGIVLLELVT
501: GQKPLSVING VEGFKGSLVD WVSQYLGTGR SKDAIDRSIC DKGHDEEILQ FLKIACSCVV SRPKERPTMI QVYESLKNMA DKHGVSEHYD EFPLVFNKQE
601: A

Arabidopsis Description

Probable inactive receptor kinase At1g27190 [Source:UniProtKB/Swiss-Prot;Acc:O04567]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.