CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:

nucleus 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91762
KRH35013
KRH70218

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48380.1	KRG91762	AT1G71830.1	19616764
AT5G48380.1	KRH35013	AT1G71830.1	19616764
AT5G48380.1	KRH70218	AT1G71830.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42002	Soybean	plasma membrane	79.84	77.81
KRH49900	Soybean	cytosol	28.29	68.24
KRH66279	Soybean	cytosol	14.47	48.63
KRH07291	Soybean	plasma membrane	42.28	42.35
KRH21657	Soybean	cytosol	29.11	42.32
KRH21659	Soybean	cytosol	16.1	41.95
KRH66278	Soybean	cytosol	31.22	41.83
KRH40243	Soybean	plasma membrane	41.14	41.0
KRH00983	Soybean	nucleus, plasma membrane	40.98	40.78
KRH37646	Soybean	cytosol	16.1	40.57
KRG88547	Soybean	cytosol	20.33	38.46
Bra038824.1-P	Field mustard	cytosol	20.0	37.16
CDX69430	Canola	extracellular	14.15	36.4
CDY07991	Canola	plasma membrane	15.28	36.29
VIT_05s0094g01290.t01	Wine grape	mitochondrion	7.48	35.94
Bra001255.1-P	Field mustard	plasma membrane	15.12	35.91
CDY38095	Canola	plasma membrane	15.45	35.85
Os01t0891601-01	Rice	extracellular, golgi, plasma membrane	14.96	35.66
AT5G48380.1	Thale cress	plasma membrane	35.94	35.65
CDX85334	Canola	plasma membrane	36.1	35.63
Bra020705.1-P	Field mustard	plasma membrane	31.87	35.51
KRH66277	Soybean	plasma membrane	26.02	35.48
KRH66274	Soybean	plasma membrane	26.02	35.48
CDY48749	Canola	plasma membrane	35.94	35.47
CDY38092	Canola	plasma membrane	15.45	35.45
CDX85492	Canola	plasma membrane	15.45	35.45
CDY05685	Canola	plasma membrane	35.61	35.04
KRH66275	Soybean	mitochondrion, plasma membrane	14.15	34.94
Bra037490.1-P	Field mustard	plastid	26.34	34.62
KRH18546	Soybean	extracellular	13.17	34.62
CDX86309	Canola	golgi, mitochondrion, plasma membrane, plastid	26.34	34.62
KRH42000	Soybean	vacuole	21.63	34.46
KRG93454	Soybean	mitochondrion	21.95	34.18
Bra040380.1-P	Field mustard	extracellular	12.68	33.19
KRH18545	Soybean	plasma membrane	15.77	32.99
CDY16992	Canola	cytosol, plasma membrane, plastid	10.73	32.84
KRH28321	Soybean	extracellular, plasma membrane	13.66	31.23
KRH77166	Soybean	plasma membrane	13.17	30.22
KRH21660	Soybean	cytosol	7.32	28.3
Bra006366.1-P	Field mustard	mitochondrion	14.15	26.77
CDX70708	Canola	extracellular, plasma membrane, vacuole	14.8	25.42
Os01t0891300-01	Rice	plasma membrane, plastid	1.3	2.23

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100819209	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	EMBL:ACUP02004784
EnsemblPlantsGene:GLYMA_08G062700	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
UniProt:I1KQT4	InterPro:IPR000719	InterPro:IPR032675	EnsemblPlants:KRH41999	ProteinID:KRH41999	ProteinID:KRH41999.1
InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	PFAM:PF07714	PFAM:PF08263	PFscan:PS50011
PANTHER:PTHR44101	PANTHER:PTHR44101:SF1	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
UniParc:UPI000296022F	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:4828944..4831593

Molecular Weight (calculated)

69107.9 Da

IEP (calculated)

6.808

GRAVY (calculated)

-0.228

Length

615 amino acids

Sequence
(BLAST)

001: MCTCSEMGFQ IKRSIVIERF LCGLLLGVLM VGHGTDTDVF CLSSIKESLE DPHDYFSSWK FNDVNICVFV GVECWQHGEN KVLNLNLTNM GLKGEFPRGL
101: RGCSSLVGLD LSHNELTGPI PSDISTLLPY ATSIDLSNNK FNGEIPPSLA NCSYLNSLRL DNNMLSGHIP QELGQLQRIR NISFANNNLS GPLPLFRDGV
201: TSAEAYANNT QLCGGPLPPC SSDDFPQSFK DGLVVGYAFS LTSSIFLYMF LCKPWHQSKH KRNNNHWNKV KEIGKYICSI SGRKTPSEAD PTHQFQALQL
301: QDKAMKEISL VMERMKSTMS LTEIKDATDC FSLENAIGMG KIGIMYEGRL TDGSNLAIKR LFGSKQFKKE FLLEIRILGK YKHKNIVPLL GFCVERNERI
401: LVYQHMPNGR LSKWLHPLES EVTRLNWPQR IKIALGVARG LSWLHYTCNL HVVHRNISSE CVLLDKNFEP KISNFGKAKF MNPNIEDGAS TIFYASDGKK
501: DVYDFGSLIF ELITGKTFNE LSRSSYNATN LSGNPSNFYD AIEESLIGEG FENEVYTLIK VACKCVKPFP DERPTMLEVY NYMIDIWGER HRISDGSDTL
601: NVSSSSTSVD EIVEL

Best Arabidopsis Sequence Match ( AT1G27190.1 )
(BLAST)

001: MKKIFITLLW LLFISSFLCS SSSAEDDVLC LQGLKNSLID PSSRLSSWSF PNSSASSICK LTGVSCWNEK ENRIISLQLQ SMQLAGEIPE SLKLCRSLQS
101: LDLSGNDLSG SIPSQICSWL PYLVTLDLSG NKLGGSIPTQ IVECKFLNAL ILSDNKLSGS IPSQLSRLDR LRRLSLAGND LSGTIPSELA RFGGDDFSGN
201: NGLCGKPLSR CGALNGRNLS IIIVAGVLGA VGSLCVGLVI FWWFFIREGS RKKKGYGAGK SKDDSDWIGL LRSHKLVQVT LFQKPIVKIK LGDLMAATNN
301: FSSGNIDVSS RTGVSYKADL PDGSALAVKR LSACGFGEKQ FRSEMNKLGE LRHPNLVPLL GYCVVEDERL LVYKHMVNGT LFSQLHNGGL CDAVLDWPTR
401: RAIGVGAAKG LAWLHHGCQP PYLHQFISSN VILLDDDFDA RITDYGLAKL VGSRDSNDSS FNNGDLGELG YVAPEYSSTM VASLKGDVYG FGIVLLELVT
501: GQKPLSVING VEGFKGSLVD WVSQYLGTGR SKDAIDRSIC DKGHDEEILQ FLKIACSCVV SRPKERPTMI QVYESLKNMA DKHGVSEHYD EFPLVFNKQE
601: A

Arabidopsis Description

Probable inactive receptor kinase At1g27190 [Source:UniProtKB/Swiss-Prot;Acc:O04567]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.