Factsheet for Os01t0891300-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

cytosol 4
plastid 1
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os04t0457800-01
Os06t0225300-01
Os08t0174700-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48380.1	Os04t0457800-01	AT1G71830.1	19616764
AT5G48380.1	Os06t0225300-01	AT1G71830.1	19616764
AT5G48380.1	Os08t0174700-01	AT1G71830.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69430	Canola	extracellular	2.23	3.35
Os01t0891700-01	Rice	plasma membrane	2.79	3.27
CDX85492	Canola	plasma membrane	2.23	2.99
Os01t0892300-01	Rice	extracellular, golgi, plasma membrane	2.23	2.87
Os09t0131200-01	Rice	plasma membrane	2.23	2.84
CDY38095	Canola	plasma membrane	1.95	2.64
CDY38092	Canola	plasma membrane	1.95	2.61
Bra040380.1-P	Field mustard	extracellular	1.39	2.13
CDX70708	Canola	extracellular, plasma membrane, vacuole	1.95	1.96
Bra006366.1-P	Field mustard	mitochondrion	1.39	1.54
KRH42002	Soybean	plasma membrane	2.51	1.43
KRH41999	Soybean	cytosol, golgi, plasma membrane	2.23	1.3
Os05t0399800-01	Rice	extracellular	0.84	1.18
CDY48749	Canola	plasma membrane	1.67	0.96
PGSC0003DMT400070664	Potato	cytosol, plasma membrane, plastid	0.84	0.81
Os01t0891601-01	Rice	extracellular, golgi, plasma membrane	0.56	0.78
Bra001255.1-P	Field mustard	plasma membrane	0.56	0.77
CDY07991	Canola	plasma membrane	0.56	0.77
Solyc07g006480.2.1	Tomato	plasma membrane	1.39	0.77
PGSC0003DMT400070657	Potato	peroxisome, plasma membrane, plastid	0.84	0.75
Os05t0414700-01	Rice	plasma membrane	1.11	0.66
AT5G48380.1	Thale cress	plasma membrane	1.11	0.65
CDX85334	Canola	plasma membrane	1.11	0.64
CDY05685	Canola	plasma membrane	1.11	0.64
Bra020705.1-P	Field mustard	plasma membrane	0.84	0.54
PGSC0003DMT400075494	Potato	plasma membrane	0.84	0.52
CDY16992	Canola	cytosol, plasma membrane, plastid	0.28	0.5
PGSC0003DMT400070667	Potato	cytosol	0.28	0.45
Solyc12g096710.1.1	Tomato	plasma membrane	0.84	0.37
PGSC0003DMT400075495	Potato	plasma membrane	0.56	0.34
Os04t0487200-01	Rice	plasma membrane	0.56	0.32
PGSC0003DMT400070666	Potato	plastid	0.28	0.21
Os11t0249900-01	Rice	plasma membrane	0.28	0.2
Solyc12g096720.1.1	Tomato	cytosol	0.0	0.0
VIT_05s0094g01290.t01	Wine grape	mitochondrion	0.0	0.0
PGSC0003DMT400070694	Potato	cytosol	0.0	0.0
Bra037490.1-P	Field mustard	plastid	0.0	0.0
Bra038824.1-P	Field mustard	cytosol	0.0	0.0
CDX86309	Canola	golgi, mitochondrion, plasma membrane, plastid	0.0	0.0
KRH49900	Soybean	cytosol	0.0	0.0
KRH21659	Soybean	cytosol	0.0	0.0
KRH21657	Soybean	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.50.720	Gene3D:3.90.180.10	MapMan:50.1.3	InterPro:ADH_C	EMBL:AK063674	EMBL:AK099151
ProteinID:BAB90185.1	ProteinID:BAF06968.1	ProteinID:BAS75663.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:GroES-like_sf	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os01g0891300
EnsemblPlants:Os01t0891300-01	PFAM:PF00107	PFAM:PF16884	InterPro:PKS_ER	PANTHER:PTHR43205	PANTHER:PTHR43205:SF8
UniProt:Q8S0M7	SMART:SM00829	SUPFAM:SSF50129	SUPFAM:SSF51735	UniParc:UPI00000A6CE3	SEG:seg

Description

Similar to Allyl alcohol dehydrogenase. (Os01t0891300-01);Similar to Allyl alcohol dehydrogenase. (Os01t0891300-02)

Coordinates

chr1:+:38752615..38754941

Molecular Weight (calculated)

39205.6 Da

IEP (calculated)

7.248

GRAVY (calculated)

0.004

Length

359 amino acids

Sequence
(BLAST)

001: MEQQQAAPMA RNRKVVLREY IAGRPPREDD MVLVDGGTVA LRVPEAAAPA PAVLVKNLYL SCDPYMRGRM RDFHGSYIPP FKPGSVIEGL GVARVVDSTH
101: PGFSAGDIVS GMTGWEEYSL IDRPEQLSKI QQSDIPLSYH LGLLGMPGFT AYAGFYEICS PKKGEFVFVS AASGAVGQIV GQLAKLHGCY VVGSAGTNQK
201: VELLKGKFGF DAAFNYKEEP DLTAALKRYF PEGIDIYFEN VGGPMLDAVL LNMRTHGRIA VCGMVSQNAL TDPVGIHNIF CLVPKRIRMQ GFIQSDHLHM
301: FPQFVSDMAK HYRDGKIVYV EDMSIGLENA PAALVGLFSG KNVGKKVVCV SQELSQFTF

Best Arabidopsis Sequence Match ( AT1G65560.1 )
(BLAST)

001: MGEVSVVENK KVILKNYVDG IPTETDMEVK LGETIELKAP KGSSCFLVKN LYLSCDPYMR GRMRDFHGSY LPPFVPGQRI EGFGLARVID SDDTNYKPGD
101: IVSGIIGWEE YSLLRSSDNL QLRNIQLDDD IPLSYHLGLL GMAGFTAYAG FNEICCPKKG DSVFVSAACG AVGQLVGQLA KLHGCYVVGS AGSKQKVEIL
201: KNELGYDEAF NYKEEADLDT ALKRYFPEGI DIYFDNVGGS MLDAALLNMK VRGRIALCGM VSLQSLSTSS QGIKNLYSAI YKRLRLEGFL QSDYLHIFPQ
301: FLENVKRYYK EGKIVYVEDI SEGLDLAPAA LVGLFSGKNI GKQVVRVAKE

Arabidopsis Description

Zinc-binding dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4IBH8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.