Factsheet for Os05t0399800-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0892300-01	Rice	extracellular, golgi, plasma membrane	34.9	31.9
Os01t0891601-01	Rice	extracellular, golgi, plasma membrane	30.98	30.62
Os09t0131200-01	Rice	plasma membrane	32.16	29.08
Os01t0891700-01	Rice	plasma membrane	31.37	26.14
Os04t0487200-01	Rice	plasma membrane	61.96	25.4
GSMUA_Achr6P28420_001	Banana	golgi, plasma membrane	31.76	20.45
GSMUA_Achr2P05900_001	Banana	cytosol	37.25	19.75
Os05t0414700-01	Rice	plasma membrane	34.51	14.5
Os11t0249900-01	Rice	plasma membrane	19.22	9.78
Os01t0891300-01	Rice	plasma membrane, plastid	1.18	0.84

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:9267740	EMBL:AK242225	UniProt:B7F9D3	ProteinID:BAH93144.1
ProteinID:BAS93906.1	ProteinID:EEE63653.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	EnsemblPlantsGene:Os05g0399800	EnsemblPlants:Os05t0399800-01	PFAM:PF00560	PFAM:PF08263	PFAM:PF13516
PRINTS:PR00019	PFscan:PS51450	PANTHER:PTHR44839	SUPFAM:SSF52058	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI0000F18960	RefSeq:XP_015638474.1	SEG:seg	:	:	:

Description

Leucine-rich repeat, N-terminal domain containing protein. (Os05t0399800-01)

Coordinates

chr5:-:19448731..19449841

Molecular Weight (calculated)

26725.1 Da

IEP (calculated)

4.638

GRAVY (calculated)

0.302

Length

255 amino acids

Sequence
(BLAST)

001: MPYLVQLLLL TVALTLPTSV HPQSGTPRED DVRCLEGLKT SLGDPDGRLA SWTFSNTSAG AICELSGVSC WNPDESRIIA LSLSGFGLTG AIPSELQFCS
101: AITTLDLSSN RLGGQIPPAL CDWLPFVVNL DLSGNQLSGP IPAELANCKF INSLKLSANS LSGKIPASLV LLGHLKSLDL SNNNLDGDIP PKLAASFSAD
201: AFADNPDLVE PHSGFNLGVL FGRPEAAAAI AFVFGFVGTL FFGPSIIRRV AGRSC

Best Arabidopsis Sequence Match ( AT3G49750.1 )
(BLAST)

001: MTRSHRLLLL LLLIFQTAQR LTTADPNDEA CLKNLRQNLE DPASNLRNWT NSVFSNPCSG FTSYLPGATC NNGRIYKLSL TNLSLRGSIS PFLSNCTNLQ
101: SLDLSSNQIS GVIPPEIQYL VNLAVLNLSS NHLSGEITPQ LALCAYLNVI DLHDNELSGQ IPQQLGLLAR LSAFDVSNNK LSGQIPTYLS NRTGNFPRFN
201: ASSFIGNKGL YGYPLQEMMM KSKGLSVMAI VGIGLGSGIA SLMISFTGVC LWLRITEKKI VEEEGKISQS MPDY

Arabidopsis Description

AtRLP44RLP44 [Source:UniProtKB/TrEMBL;Acc:A0A178VI92]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.