Factsheet for Os04t0487200-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 10
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plasma membrane: 18260611
plasma membrane: 18557835
extracellular: 24083427
golgi: 25047511
plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 18557835 doi

SA Whiteman, TS Nühse, DA Ashford, D Sanders, FJ Maathuis

Department of Biology Area 9, University of York, York YO10 5DD, UK.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

msms PMID: 25047511 doi

Y Nie, F Huang, S Dong, L Li, P Gao, H Zhao, Y Wang, S Han

Beijing Key Laboratory of Gene Resource and Molecular Development, Beijing Normal University, College of Life Sciences, Beijing, P. R. China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G344700.1	Wheat	vacuole	36.17	86.87
TraesCS2B01G364400.1	Wheat	vacuole	36.01	86.49
TraesCS2A01G346000.1	Wheat	plasma membrane	82.8	82.4
EES11026	Sorghum	plasma membrane	82.15	81.5
Zm00001d003245_P001	Maize	mitochondrion	80.87	80.35
Zm00001d025726_P001	Maize	plasma membrane	81.51	80.22
TraesCS2D01G344600.1	Wheat	extracellular	24.44	69.72
HORVU2Hr1G084210.1	Barley	extracellular	24.44	69.41
TraesCS2B01G364300.1	Wheat	extracellular	23.79	67.58
TraesCS2A01G345900.1	Wheat	extracellular	25.08	67.24
GSMUA_Achr6P28420_001	Banana	golgi, plasma membrane	39.55	62.12
Os05t0399800-01	Rice	extracellular	25.4	61.96
GSMUA_Achr2P05900_001	Banana	cytosol	46.14	59.67
HORVU2Hr1G084260.1	Barley	plastid	52.41	52.41
Os05t0414700-01	Rice	plasma membrane	40.68	41.68
Os11t0249900-01	Rice	plasma membrane	33.44	41.52
Os01t0891601-01	Rice	extracellular, golgi, plasma membrane	14.31	34.5
Os09t0131200-01	Rice	plasma membrane	15.59	34.4
Os01t0892300-01	Rice	extracellular, golgi, plasma membrane	14.79	32.97
Os01t0891700-01	Rice	plasma membrane	13.5	27.45
Os01t0891300-01	Rice	plasma membrane, plastid	0.32	0.56

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.10.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	EntrezGene:4336221	ProteinID:BAF15058.1
ProteinID:BAS89805.1	ProteinID:CAD41324.2	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	EnsemblPlantsGene:Os04g0487200	EnsemblPlants:Os04t0487200-01	PFAM:PF00560
PFAM:PF07714	PFAM:PF08263	PFscan:PS50011	PANTHER:PTHR44101	PANTHER:PTHR44101:SF2	InterPro:Prot_kinase_dom
UniProt:Q7XUF9	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI00001B0FBE	RefSeq:XP_015635807.1	SEG:seg	:	:	:

Description

Serine/threonine protein kinase domain containing protein. (Os04t0487200-01)

Coordinates

chr4:+:24348107..24350845

Molecular Weight (calculated)

66371.4 Da

IEP (calculated)

7.465

GRAVY (calculated)

-0.035

Length

622 amino acids

Sequence
(BLAST)

001: MPPSPPPLLL LLAVLLAAAP AAAQSATPRE DDVRCLKEVK AELRDPDGRL SAWSFGNTSA GALCLLSGVS CWNPQESRII GLSLSGFGLQ GGIPSALQFC
101: SAATTLDLSN NALVGVIPPA LCDWIPFVVN LDLSGNQLSG QLPSELANCR FLNSLKLSGN SFSGQIPDSL GRLDRLKSLD LSDNRLDGQI PPQLATFGKD
201: SFAGNKGLCG RPVSSRCGRA LSGAGLGIVI AAGVFGAAAS LLLAFFFWRC TGKSKGGRRR RRGGSESGGG SAEDGSWWAE RLRAAHNRLA PVSLFQKPIV
301: KVKLADLMAA TQDFSTSHIV VAGSSRAGTA YRAVLRDGSA LTVKRLHSCP LSEKAFRAEM GRVGQLRHPN IVPLLGFCVV EDERLLVYKH MESGALSSVM
401: KEPGEAPLDW ATRLRIAVGA ARGLAWLHHG FQVPQIHQNL SSSAVLLDED YEARFTDVGL TRLVRMAPGE GGDTSPFLNG DFGEYGYVAP ECASNPVATM
501: KGDVYAFGVI LLELVSGQEA ATVTGDAAGE GFKGTLVDWV NQLKASGRIG DAVHKSLRGN GHDSEIDEFV KIAFACIMVH PRERFSMYRV YHSLKSIGQG
601: RDVSEQFDEF PLAYNKDESD TM

Best Arabidopsis Sequence Match ( AT3G28450.1 )
(BLAST)

001: MKEIGSKPRK LLPLCFIIFL CFCSSVMAAD EDDIRCLRGL KASLTDPQNA LKSWNFDNTT LGFLCNFVGV SCWNNQENRV INLELRDMGL SGKIPDSLQY
101: CASLQKLDLS SNRLSGNIPT ELCNWLPFLV SLDLSNNELN GEIPPDLAKC SFVNSLVLSD NRLSGQIPVQ FSALGRLGRF SVANNDLSGR IPVFFSSPSY
201: SSDDFSGNKG LCGRPLSSSC GGLSKKNLGI IIAAGVFGAA ASMLLAFGIW WYYHLKWTRR RRSGLTEVGV SGLAQRLRSH KLTQVSLFQK PLVKVKLGDL
301: MAATNNFNSE NIIVSTRTGT TYKALLPDGS ALAVKHLSTC KLGEREFRYE MNQLWELRHS NLAPLLGFCV VEEEKFLVYK YMSNGTLHSL LDSNRGELDW
401: STRFRIGLGA ARGLAWLHHG CRPPILHQNI CSSVILIDED FDARIIDSGL ARLMVPSDNN ESSFMTGDLG EFGYVAPEYS TTMLASLKGD VYGLGVVLLE
501: LATGLKAVGG EGFKGSLVDW VKQLESSGRI AETFDENIRG KGHDEEISKF VEIALNCVSS RPKERWSMFQ AYQSLKAIAE KQGYSFSEQD DDFPLIFDTQ
601: ENEKV

Arabidopsis Description

BIR2Inactive LRR receptor-like serine/threonine-protein kinase BIR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSI9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.