Factsheet for Zm00001d025726_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
golgi 4
plasma membrane 7
endoplasmic reticulum 4
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

extracellular: 20408568
plasma membrane: 23353019
mitochondrion: 27297264

msms PMID: 23353019 doi

D Hopff, S Wienkoop, S Lüthje

University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11026	Sorghum	plasma membrane	90.98	91.71
Zm00001d003245_P001	Maize	mitochondrion	90.82	91.69
TraesCS2D01G344700.1	Wheat	vacuole	35.28	86.1
TraesCS2B01G364400.1	Wheat	vacuole	35.28	86.1
Os04t0487200-01	Rice	plasma membrane	80.22	81.51
TraesCS2A01G346000.1	Wheat	plasma membrane	80.38	81.28
Zm00001d016331_P001	Maize	vacuole	25.16	70.98
HORVU2Hr1G084210.1	Barley	extracellular	23.26	67.12
TraesCS2D01G344600.1	Wheat	extracellular	23.1	66.97
TraesCS2B01G364300.1	Wheat	extracellular	22.63	65.3
GSMUA_Achr2P05900_001	Banana	cytosol	47.94	62.99
TraesCS2A01G345900.1	Wheat	extracellular	23.1	62.93
GSMUA_Achr6P28420_001	Banana	golgi, plasma membrane	39.4	62.88
Zm00001d021202_P030	Maize	plastid	40.35	55.92
Zm00001d006033_P032	Maize	plastid	51.74	52.07
HORVU2Hr1G084260.1	Barley	plastid	50.32	51.13
Zm00001d007277_P001	Maize	plasma membrane	38.29	41.23
Zm00001d038195_P001	Maize	plasma membrane	40.35	40.48
Zm00001d039672_P001	Maize	plasma membrane	14.72	36.33
Zm00001d018344_P001	Maize	extracellular, plasma membrane	15.82	35.46
Zm00001d052058_P001	Maize	extracellular, plasma membrane	15.35	34.64

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.10.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	ProteinID:AQK44377.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	UniProt:K7TUC5	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF07714	PFAM:PF08263	PFAM:PF13855
PRINTS:PR00019	PFscan:PS50011	PANTHER:PTHR44101	PANTHER:PTHR44101:SF2	InterPro:Prot_kinase_dom	SMART:SM00369
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000222128E
EnsemblPlantsGene:Zm00001d025726	EnsemblPlants:Zm00001d025726_P001	EnsemblPlants:Zm00001d025726_T001	SEG:seg	:	:

Description

Putative leucine-rich repeat transmembrane protein kinase family protein

Coordinates

chr10:+:127609718..127611616

Molecular Weight (calculated)

67433.9 Da

IEP (calculated)

8.091

GRAVY (calculated)

-0.062

Length

632 amino acids

Sequence
(BLAST)

001: MPPPRLLPPI IVLLLLAPPA APQPAPGSEA APQQDGLRCL RGVKHDLADP NGRLADWDFK NTSGGAVCSY SGIGCWNLQE SRVLSLSLSG FGLVGSIPSS
101: LQYCSAATTL DLSSNALVGT ILPALCDWLP FLVTLDLSSN QLTGAIPAEL ANCRFLNSLT LSGNQLSGQI PASLARLDRL KSLDLSGNQL SGQIPPQLGD
201: RFPRDSFSGN SGLCGRPVSS RCGRGLGSAG LGIVIAAGVL GAAASLLLAY FFWRCSGKGK GGRRRHRRGG SESGGGEDGS WWTERLRAAH NRLAPVSLFQ
301: KPIVKVKLAD LMAATQDFSS SHIVVAGSSR AGTAYRAVLR DGSALTVKRL HSCPLSEKAF RAEMCRIGQL RHPNIVPLLG FCVVEDERLL VYKHMESGAL
401: SSVMKKKPGE EAPLLDWATR LRIAVGAARG LAWLHHGFQV PQIHQNLSSS AVLLDEDYEA RITDVGLTRL VRMAPGEGGD TSPFLKGDLG EFGYVAPECA
501: SNPVGTTKGD AYAFGVVLFE LVSGQEAAAA AVGTVDVMGE GFKGTLVDWV YQLKASGRIG DAVDKSLRGK GHEAEIEEFL KVAFACTQPR VRERHSMYRV
601: YHALKSIGEG RDATEQFDEF PLAYNKDDSD TM

Best Arabidopsis Sequence Match ( AT3G28450.1 )
(BLAST)

001: MKEIGSKPRK LLPLCFIIFL CFCSSVMAAD EDDIRCLRGL KASLTDPQNA LKSWNFDNTT LGFLCNFVGV SCWNNQENRV INLELRDMGL SGKIPDSLQY
101: CASLQKLDLS SNRLSGNIPT ELCNWLPFLV SLDLSNNELN GEIPPDLAKC SFVNSLVLSD NRLSGQIPVQ FSALGRLGRF SVANNDLSGR IPVFFSSPSY
201: SSDDFSGNKG LCGRPLSSSC GGLSKKNLGI IIAAGVFGAA ASMLLAFGIW WYYHLKWTRR RRSGLTEVGV SGLAQRLRSH KLTQVSLFQK PLVKVKLGDL
301: MAATNNFNSE NIIVSTRTGT TYKALLPDGS ALAVKHLSTC KLGEREFRYE MNQLWELRHS NLAPLLGFCV VEEEKFLVYK YMSNGTLHSL LDSNRGELDW
401: STRFRIGLGA ARGLAWLHHG CRPPILHQNI CSSVILIDED FDARIIDSGL ARLMVPSDNN ESSFMTGDLG EFGYVAPEYS TTMLASLKGD VYGLGVVLLE
501: LATGLKAVGG EGFKGSLVDW VKQLESSGRI AETFDENIRG KGHDEEISKF VEIALNCVSS RPKERWSMFQ AYQSLKAIAE KQGYSFSEQD DDFPLIFDTQ
601: ENEKV

Arabidopsis Description

BIR2Inactive LRR receptor-like serine/threonine-protein kinase BIR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSI9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.