Factsheet for Zm00001d007277_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
golgi 4
plasma membrane 6
endoplasmic reticulum 4
vacuole 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

extracellular: 20408568
plasma membrane: 23353019
mitochondrion: 27297264

msms PMID: 23353019 doi

D Hopff, S Wienkoop, S Lüthje

University of Hamburg, Biocenter Klein Flottbek and Botanical Garden, Plant Physiology, Ohnhorststraße 18, D-22609 Hamburg, Germany.

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d016928_P010
Zm00001d024430_P002
Zm00001d025580_P001
Zm00001d049480_P005
Zm00001d050868_P004

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48380.1	Zm00001d016928_P010	AT1G71830.1	19616764
AT5G48380.1	Zm00001d024430_P002	AT1G71830.1	19616764
AT5G48380.1	Zm00001d025580_P001	AT1G71830.1	19616764
AT5G48380.1	Zm00001d049480_P005	AT1G71830.1	19616764
AT5G48380.1	Zm00001d050868_P004	AT1G71830.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039672_P001	Maize	plasma membrane	41.06	94.14
EES09539	Sorghum	plasma membrane	95.91	93.21
Os11t0249900-01	Rice	plasma membrane	72.23	84.63
TraesCS4D01G084000.1	Wheat	plasma membrane	83.3	80.69
TraesCS4B01G086300.1	Wheat	plasma membrane	83.3	80.69
HORVU4Hr1G014760.3	Barley	plasma membrane	82.79	80.2
TraesCS4A01G229800.1	Wheat	plasma membrane	82.62	80.03
GSMUA_Achr6P28640_001	Banana	plastid	31.86	79.57
GSMUA_Achr9P08150_001	Banana	cytosol, nucleus, plastid	51.79	75.81
Bra038824.1-P	Field mustard	cytosol	36.46	64.65
GSMUA_Achr2P05730_001	Banana	cytosol, peroxisome, plasma membrane	44.12	61.96
Zm00001d038195_P001	Maize	plasma membrane	65.25	60.79
VIT_00s0220g00120.t01	Wine grape	plasma membrane	62.86	59.42
Solyc06g082920.2.1	Tomato	plasma membrane	60.82	58.24
PGSC0003DMT400071183	Potato	plasma membrane	60.48	57.91
Bra037490.1-P	Field mustard	plastid	46.17	57.91
CDX86309	Canola	golgi, mitochondrion, plasma membrane, plastid	45.66	57.27
VIT_00s2085g00010.t01	Wine grape	plasma membrane	59.97	56.87
Bra020705.1-P	Field mustard	plasma membrane	52.64	55.98
AT5G48380.1	Thale cress	plasma membrane	58.09	55.0
CDY48749	Canola	plasma membrane	56.56	53.29
CDY05685	Canola	plasma membrane	56.56	53.12
CDX85334	Canola	plasma membrane	56.05	52.81
Solyc12g096720.1.1	Tomato	cytosol	10.39	42.96
PGSC0003DMT400070664	Potato	cytosol, plasma membrane, plastid	26.75	42.55
CDX69430	Canola	extracellular	16.7	41.0
CDY38095	Canola	plasma membrane	18.23	40.38
PGSC0003DMT400075495	Potato	plasma membrane	40.03	39.97
CDX85492	Canola	plasma membrane	18.23	39.93
CDY38092	Canola	plasma membrane	18.23	39.93
PGSC0003DMT400070667	Potato	cytosol	14.99	39.82
PGSC0003DMT400070657	Potato	peroxisome, plasma membrane, plastid	27.09	39.65
CDY16992	Canola	cytosol, plasma membrane, plastid	13.29	38.81
Zm00001d003245_P001	Maize	mitochondrion	41.06	38.5
PGSC0003DMT400075494	Potato	plasma membrane	37.99	38.32
Zm00001d025726_P001	Maize	plasma membrane	41.23	38.29
Zm00001d016331_P001	Maize	vacuole	14.31	37.5
CDY07991	Canola	plasma membrane	16.35	37.07
Bra040380.1-P	Field mustard	extracellular	14.65	36.6
Bra001255.1-P	Field mustard	plasma membrane	16.01	36.29
PGSC0003DMT400070694	Potato	cytosol	12.95	35.85
PGSC0003DMT400070666	Potato	plastid	28.45	35.84
Solyc07g006480.2.1	Tomato	plasma membrane	39.35	35.38
Zm00001d052058_P001	Maize	extracellular, plasma membrane	15.84	33.21
Zm00001d018344_P001	Maize	extracellular, plasma membrane	15.84	32.98
VIT_05s0094g01290.t01	Wine grape	mitochondrion	6.81	31.25
CDX70708	Canola	extracellular, plasma membrane, vacuole	18.57	30.45
Bra006366.1-P	Field mustard	mitochondrion	16.7	30.15
Solyc12g096710.1.1	Tomato	plasma membrane	40.03	29.12
Zm00001d021202_P030	Maize	plastid	21.98	28.29
Zm00001d006033_P032	Maize	plastid	25.04	23.41

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.10.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	UniProt:A0A1D6F562	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
ProteinID:ONM26433.1	PFAM:PF07714	PFAM:PF13516	PFscan:PS50011	PANTHER:PTHR44101	PANTHER:PTHR44101:SF3
InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000843238F	EnsemblPlantsGene:Zm00001d007277	EnsemblPlants:Zm00001d007277_P001	EnsemblPlants:Zm00001d007277_T001	SEG:seg	:

Description

Brassinosteroid LRR receptor kinase

Coordinates

chr2:-:226571959..226574550

Molecular Weight (calculated)

64790.8 Da

IEP (calculated)

6.291

GRAVY (calculated)

-0.100

Length

587 amino acids

Sequence
(BLAST)

001: MAVRCSCTAL FPLFFCFMIC QLCYGTVTDI QCLKKLKASV DPDNKLEWTF NNNTEGSICG FNGVECWHPN ENRVLSLHLG SFGLKGEFPD GLENCSSMTS
101: LDLSSNSLSG PIPADISRRL PFVTNLDLSF NSFSGEIPEA LANCSYLNIV NLQHNKLTGT IPVQLAALSR LAQFNVADNQ LSGQIPSSLS KFPASDFANQ
201: DLCGRPLSND CTANSSSRTG IIVGSAVGGA VITLIIAAVI LFIVLRKMPK KKKLKDVSLF EKSVSKMNLN DLMKATDDFT KDNIIGTGRS GTMYRATLPD
301: GSFLAIKRLQ DTQHSEDQFT SEMSTLGSVR QRNLVPLLGY CIVKNERLLV YKYMPKGSLY DNLHQQNSDK KALEWPLRLK IAIGSARGLA WLHHSCNPRI
401: LHRNISSKCI LLDDDYEPKI SDFGLARLMN PIDTHLSTFV NGEFGDLGYV APEYTRTLVA TPKGDVYSFG VVLLELVTRE EPTHVSNAPE NFKGSLVDWI
501: TYLSNNSILQ DAVDKSLIGK DNDAELLQCM KVACSCVLSS PKERPTMFEV YQLLRAVGEK YHFSAADDEL TMLPQNANPE DELIVAN

Best Arabidopsis Sequence Match ( AT5G48380.1 )
(BLAST)

001: MMMGRLVFVI WLYNCLCLLL LSSLVDADQA NIDCLRTFKS QVEDPNRYLS TWVFGNETAG YICKFSGVTC WHDDENRVLS IKLSGYGLRG VFPPAVKLCA
101: DLTGLDLSRN NFSGPLPANI STLIPLVTIL DLSYNSFSGE IPMLISNITF LNTLMLQHNQ FTGTLPPQLA QLGRLKTFSV SDNRLVGPIP NFNQTLQFKQ
201: ELFANNLDLC GKPLDDCKSA SSSRGKVVII AAVGGLTAAA LVVGVVLFFY FRKLGAVRKK QDDPEGNRWA KSLKGQKGVK VFMFKKSVSK MKLSDLMKAT
301: EEFKKDNIIA TGRTGTMYKG RLEDGSLLMI KRLQDSQRSE KEFDAEMKTL GSVKNRNLVP LLGYCVANKE RLLMYEYMAN GYLYDQLHPA DEESFKPLDW
401: PSRLKIAIGT AKGLAWLHHS CNPRIIHRNI SSKCILLTAE FEPKISDFGL ARLMNPIDTH LSTFVNGEFG DFGYVAPEYS RTMVATPKGD VYSFGVVLLE
501: LVTGQKATSV TKVSEEKAEE ENFKGNLVEW ITKLSSESKL QEAIDRSLLG NGVDDEIFKV LKVACNCVLP EIAKQRPTMF EVYQLLRAIG ESYNFTADDD
601: ILIPSESGEG DFIEELIVAR

Arabidopsis Description

BIR1Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.