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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX68299
CDX72833
CDX96350
CDY36679

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G48380.1 CDX68299 AT1G71830.1 19616764
AT5G48380.1 CDX72833 AT1G71830.1 19616764
AT5G48380.1 CDX96350 AT1G71830.1 19616764
AT5G48380.1 CDY36679 AT1G71830.1 19616764
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra001255.1-P Field mustard plasma membrane 93.82 93.82
CDY38095 Canola plasma membrane 46.72 45.66
CDY38092 Canola plasma membrane 47.1 45.52
CDX85492 Canola plasma membrane 46.33 44.78
CDX69430 Canola extracellular 39.0 42.26
TraesCS3D01G395600.1 Wheat endoplasmic reticulum, vacuole 35.14 41.74
CDY16992 Canola cytosol, plasma membrane, plastid 31.66 40.8
TraesCS3D01G395700.1 Wheat plasma membrane 39.77 38.29
TraesCS3D01G396100.1 Wheat plasma membrane 39.0 37.97
TraesCS3A01G401300.1 Wheat cytosol 35.14 37.92
TraesCS3B01G433700.1 Wheat plasma membrane 38.61 37.88
TraesCS3A01G400700.1 Wheat extracellular, plasma membrane 39.0 37.83
TraesCS3A01G400800.1 Wheat extracellular 38.61 37.59
TraesCS3D01G395900.1 Wheat extracellular, golgi, plasma membrane 36.68 37.55
TraesCS3B01G434200.1 Wheat plasma membrane 39.38 37.36
TraesCS3B01G433800.1 Wheat extracellular 32.43 37.33
TraesCS3D01G395100.1 Wheat extracellular, plasma membrane 37.45 37.16
TraesCS3B01G434000.1 Wheat plasma membrane 36.68 36.4
TraesCS3D01G395400.1 Wheat extracellular, golgi, plasma membrane 34.36 36.33
Os01t0892300-01 Rice extracellular, golgi, plasma membrane 39.0 36.2
HORVU3Hr1G090040.1 Barley extracellular, plasma membrane 34.75 36.0
TraesCS3A01G401100.1 Wheat extracellular, plasma membrane 39.77 35.89
TraesCS3A01G400900.1 Wheat extracellular, plasma membrane 39.38 35.66
TraesCS3B01G434100.1 Wheat plasma membrane 37.07 35.56
KXG33866 Sorghum cytosol 33.59 35.37
Zm00001d039672_P001 Maize plasma membrane 34.75 35.16
TraesCS3A01G401200.1 Wheat plasma membrane 36.29 34.81
Os01t0891601-01 Rice extracellular, golgi, plasma membrane 33.98 34.11
KRH66279 Soybean cytosol 23.94 33.88
TraesCS7A01G410600.1 Wheat extracellular 33.98 33.59
TraesCS3B01G433900.1 Wheat extracellular, mitochondrion, nucleus, plasma membrane 39.77 33.33
CDX70708 Canola extracellular, plasma membrane, vacuole 44.02 31.84
CDX85197 Canola plastid 27.03 31.53
TraesCS3A01G401000.1 Wheat cytosol 20.85 31.4
Os01t0891700-01 Rice plasma membrane 34.75 29.41
PGSC0003DMT400070667 Potato cytosol 23.55 27.6
TraesCS3D01G395800.1 Wheat plastid 37.07 27.04
CDY18672 Canola mitochondrion, plasma membrane 25.1 26.75
CDX81298 Canola extracellular, plasma membrane 24.71 26.34
CDY05959 Canola extracellular, plasma membrane 27.03 25.36
VIT_05s0094g01290.t01 Wine grape mitochondrion 10.81 21.88
KRH21657 Soybean cytosol 31.66 19.39
CDY05685 Canola plasma membrane 40.54 16.8
CDY48749 Canola plasma membrane 40.15 16.69
KRH66278 Soybean cytosol 29.34 16.56
Zm00001d007277_P001 Maize plasma membrane 37.07 16.35
Os05t0414700-01 Rice plasma membrane 38.22 16.31
AT5G48380.1 Thale cress plasma membrane 39.0 16.29
PGSC0003DMT400070664 Potato cytosol, plasma membrane, plastid 23.17 16.26
TraesCS1B01G269900.1 Wheat plasma membrane 37.84 16.2
PGSC0003DMT400075495 Potato plasma membrane 36.68 16.16
CDX85334 Canola plasma membrane 38.61 16.05
TraesCS1A01G259600.1 Wheat plasma membrane 37.45 16.03
PGSC0003DMT400075494 Potato plasma membrane 35.91 15.98
EES09539 Sorghum plasma membrane 37.07 15.89
HORVU1Hr1G064780.1 Barley plasma membrane 37.07 15.89
CDX86433 Canola plasma membrane 34.36 15.89
KRH00983 Soybean nucleus, plasma membrane 37.84 15.86
PGSC0003DMT400071183 Potato plasma membrane 37.45 15.82
KRH40243 Soybean plasma membrane 37.45 15.72
EES19530 Sorghum plasma membrane 36.68 15.68
TraesCS4B01G086300.1 Wheat plasma membrane 36.68 15.68
TraesCS1D01G259400.1 Wheat plasma membrane 36.29 15.56
HORVU4Hr1G014760.3 Barley plasma membrane 36.29 15.51
TraesCS4D01G084000.1 Wheat plasma membrane 36.29 15.51
KRH42002 Soybean plasma membrane 37.45 15.37
VIT_00s2085g00010.t01 Wine grape plasma membrane 36.68 15.35
KRH41999 Soybean cytosol, golgi, plasma membrane 36.29 15.28
PGSC0003DMT400070657 Potato peroxisome, plasma membrane, plastid 23.55 15.21
TraesCS4A01G229800.1 Wheat plasma membrane 35.52 15.18
CDY16228 Canola plasma membrane 34.75 15.03
Solyc06g082920.2.1 Tomato plasma membrane 35.52 15.01
CDY14686 Canola plasma membrane 34.36 14.91
Zm00001d038195_P001 Maize plasma membrane 35.91 14.76
CDY38780 Canola plasma membrane 33.98 14.67
KRH07291 Soybean plasma membrane 34.75 14.66
VIT_00s0220g00120.t01 Wine grape plasma membrane 35.14 14.65
CDY11627 Canola plasma membrane 33.59 14.62
CDY47244 Canola plasma membrane 33.59 14.48
CDY04020 Canola plasma membrane 33.59 14.45
Solyc07g006480.2.1 Tomato plasma membrane 33.59 13.32
GSMUA_Achr9P08150_001 Banana cytosol, nucleus, plastid 19.69 12.72
Solyc12g096710.1.1 Tomato plasma membrane 35.52 11.4
Os11t0249900-01 Rice plasma membrane 20.85 10.78
PGSC0003DMT400070666 Potato plastid 15.44 8.58
GSMUA_Achr2P05730_001 Banana cytosol, peroxisome, plasma membrane 13.13 8.13
CDX86309 Canola golgi, mitochondrion, plasma membrane, plastid 13.13 7.26
KRH66274 Soybean plasma membrane 8.88 5.1
KRH66277 Soybean plasma membrane 8.88 5.1
GSMUA_Achr6P28640_001 Banana plastid 1.93 2.13
KRH42000 Soybean vacuole 2.7 1.81
KRH66275 Soybean mitochondrion, plasma membrane 1.54 1.61
CDX85198 Canola golgi, plasma membrane 1.93 1.32
KRG88547 Soybean cytosol 1.54 1.23
KRH37646 Soybean cytosol 1.16 1.23
Os01t0891300-01 Rice plasma membrane, plastid 0.77 0.56
PGSC0003DMT400070694 Potato cytosol 0.39 0.47
KRH49900 Soybean cytosol 0.39 0.39
KRH21659 Soybean cytosol 0.0 0.0
KRH21660 Soybean cytosol 0.0 0.0
Solyc12g096720.1.1 Tomato cytosol 0.0 0.0
Protein Annotations
Gene3D:3.80.10.10MapMan:35.1GO:A0A078F3P2UniProt:A0A078F3P2EnsemblPlants:CDY07991ProteinID:CDY07991
ProteinID:CDY07991.1GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0016020
GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00125218001InterPro:IPR001611InterPro:IPR032675InterPro:LRR_N_plant-typInterPro:LRR_dom_sf
InterPro:Leu-rich_rptPFAM:PF08263PFAM:PF13855PANTHER:PTHR44101SUPFAM:SSF52058SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0004EE3C5ESEG:seg:::
Description
BnaC03g35320DBnaC03g35320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F3P2]
Coordinates
chrLK031982:+:464337..465116
Molecular Weight (calculated)
28650.5 Da
IEP (calculated)
6.867
GRAVY (calculated)
0.071
Length
259 amino acids
Sequence
(BLAST)
001: MMMVAKQVCT IFIRSCIWLL LLPILTRAME SDITCLRSLK SQLKDPHAYL SNWIFGNYSD GYICSFFGVY CWRSKHNKVL SINLGGSGLE GEFPSGVKLC
101: SFMESLNLTG NNLTGTLPSD TFSSLPYLVT LDLSNNNLAG EIPANLPNMS YLNTLLLDHN RFTGSIPSEL ASSPRLLQFS VAHNDLKGPI PEFTAGNISL
201: SSFDDNPDLC GFPLDPCPDS FYSMAIIAAN IAAAAFFLVG ACYGWLYDSR KQNQRPRRR
Best Arabidopsis Sequence Match ( AT1G27190.1 )
(BLAST)
001: MKKIFITLLW LLFISSFLCS SSSAEDDVLC LQGLKNSLID PSSRLSSWSF PNSSASSICK LTGVSCWNEK ENRIISLQLQ SMQLAGEIPE SLKLCRSLQS
101: LDLSGNDLSG SIPSQICSWL PYLVTLDLSG NKLGGSIPTQ IVECKFLNAL ILSDNKLSGS IPSQLSRLDR LRRLSLAGND LSGTIPSELA RFGGDDFSGN
201: NGLCGKPLSR CGALNGRNLS IIIVAGVLGA VGSLCVGLVI FWWFFIREGS RKKKGYGAGK SKDDSDWIGL LRSHKLVQVT LFQKPIVKIK LGDLMAATNN
301: FSSGNIDVSS RTGVSYKADL PDGSALAVKR LSACGFGEKQ FRSEMNKLGE LRHPNLVPLL GYCVVEDERL LVYKHMVNGT LFSQLHNGGL CDAVLDWPTR
401: RAIGVGAAKG LAWLHHGCQP PYLHQFISSN VILLDDDFDA RITDYGLAKL VGSRDSNDSS FNNGDLGELG YVAPEYSSTM VASLKGDVYG FGIVLLELVT
501: GQKPLSVING VEGFKGSLVD WVSQYLGTGR SKDAIDRSIC DKGHDEEILQ FLKIACSCVV SRPKERPTMI QVYESLKNMA DKHGVSEHYD EFPLVFNKQE
601: A
Arabidopsis Description
Probable inactive receptor kinase At1g27190 [Source:UniProtKB/Swiss-Prot;Acc:O04567]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.