CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91762
KRH35013
KRH70218

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48380.1	KRG91762	AT1G71830.1	19616764
AT5G48380.1	KRH35013	AT1G71830.1	19616764
AT5G48380.1	KRH70218	AT1G71830.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH21659	Soybean	cytosol	31.37	33.9
KRH41999	Soybean	cytosol, golgi, plasma membrane	68.24	28.29
KRH42002	Soybean	plasma membrane	69.8	28.21
KRH37646	Soybean	cytosol	26.67	27.87
KRG88547	Soybean	cytosol	34.9	27.38
Bra038824.1-P	Field mustard	cytosol	35.29	27.19
KRH66275	Soybean	mitochondrion, plasma membrane	25.49	26.1
KRH42000	Soybean	vacuole	38.04	25.13
KRH66277	Soybean	plasma membrane	34.9	19.73
KRH66274	Soybean	plasma membrane	34.9	19.73
CDX86309	Canola	golgi, mitochondrion, plasma membrane, plastid	35.69	19.44
Bra037490.1-P	Field mustard	plastid	35.69	19.44
KRH21660	Soybean	cytosol	10.59	16.98
Bra020705.1-P	Field mustard	plasma membrane	35.69	16.49
KRH00983	Soybean	nucleus, plasma membrane	37.25	15.37
KRH21657	Soybean	cytosol	25.49	15.37
KRH07291	Soybean	plasma membrane	36.47	15.15
AT5G48380.1	Thale cress	plasma membrane	36.47	15.0
KRH40243	Soybean	plasma membrane	36.08	14.91
CDY48749	Canola	plasma membrane	36.08	14.77
CDX85334	Canola	plasma membrane	36.08	14.77
CDY05685	Canola	plasma membrane	36.08	14.72
KRH66278	Soybean	cytosol	24.71	13.73
KRG93454	Soybean	mitochondrion	10.59	6.84
KRH28321	Soybean	extracellular, plasma membrane	3.53	3.35
VIT_05s0094g01290.t01	Wine grape	mitochondrion	1.57	3.12
CDY16992	Canola	cytosol, plasma membrane, plastid	2.35	2.99
CDX69430	Canola	extracellular	2.75	2.93
KRH77166	Soybean	plasma membrane	2.75	2.61
CDY38095	Canola	plasma membrane	2.35	2.26
CDY38092	Canola	plasma membrane	2.35	2.24
CDX85492	Canola	plasma membrane	2.35	2.24
Os01t0891601-01	Rice	extracellular, golgi, plasma membrane	1.57	1.55
Bra006366.1-P	Field mustard	mitochondrion	1.57	1.23
CDX70708	Canola	extracellular, plasma membrane, vacuole	1.57	1.12
KRH66279	Soybean	cytosol	0.78	1.09
Bra040380.1-P	Field mustard	extracellular	0.39	0.43
CDY07991	Canola	plasma membrane	0.39	0.39
Bra001255.1-P	Field mustard	plasma membrane	0.39	0.39
KRH18546	Soybean	extracellular	0.0	0.0
KRH18545	Soybean	plasma membrane	0.0	0.0
Os01t0891300-01	Rice	plasma membrane, plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	MapMan:50.2.7	EMBL:ACUP02004646	EnsemblPlantsGene:GLYMA_07G186500	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	UniProt:K7L2K3	EnsemblPlants:KRH49900	ProteinID:KRH49900	ProteinID:KRH49900.1
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR44101	PANTHER:PTHR44101:SF1	InterPro:Prot_kinase_dom
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	UniParc:UPI000296BC52	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:35388938..35389974

Molecular Weight (calculated)

29948.3 Da

IEP (calculated)

9.926

GRAVY (calculated)

-0.293

Length

255 amino acids

Sequence
(BLAST)

001: MKSTMKFNEV SDATDCFSPD NRRLPNGWNL VVKRLLDVKQ FKREFLLEIR ILSKHRNRNI VPLLGFYIER NERILVYQYL SNGRLSKWLR PTWVARGLSW
101: FHYICNLHVV HLNISAECVL LDKNFEPKIS NFGKAKFMHP NMLGRSSSYE PIFKETFRMS LFHSNILSKL ESHIEWLTRK TFKELSCSTS NASNLSGNSR
201: NFLNAIEVSL IGEGFENKVY TLIKVACSCV QPFPDQRPTM LQVYNYMIDI WGERH

Best Arabidopsis Sequence Match ( AT5G48380.1 )
(BLAST)

001: MMMGRLVFVI WLYNCLCLLL LSSLVDADQA NIDCLRTFKS QVEDPNRYLS TWVFGNETAG YICKFSGVTC WHDDENRVLS IKLSGYGLRG VFPPAVKLCA
101: DLTGLDLSRN NFSGPLPANI STLIPLVTIL DLSYNSFSGE IPMLISNITF LNTLMLQHNQ FTGTLPPQLA QLGRLKTFSV SDNRLVGPIP NFNQTLQFKQ
201: ELFANNLDLC GKPLDDCKSA SSSRGKVVII AAVGGLTAAA LVVGVVLFFY FRKLGAVRKK QDDPEGNRWA KSLKGQKGVK VFMFKKSVSK MKLSDLMKAT
301: EEFKKDNIIA TGRTGTMYKG RLEDGSLLMI KRLQDSQRSE KEFDAEMKTL GSVKNRNLVP LLGYCVANKE RLLMYEYMAN GYLYDQLHPA DEESFKPLDW
401: PSRLKIAIGT AKGLAWLHHS CNPRIIHRNI SSKCILLTAE FEPKISDFGL ARLMNPIDTH LSTFVNGEFG DFGYVAPEYS RTMVATPKGD VYSFGVVLLE
501: LVTGQKATSV TKVSEEKAEE ENFKGNLVEW ITKLSSESKL QEAIDRSLLG NGVDDEIFKV LKVACNCVLP EIAKQRPTMF EVYQLLRAIG ESYNFTADDD
601: ILIPSESGEG DFIEELIVAR

Arabidopsis Description

BIR1Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.