Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH18546 | Soybean | extracellular | 52.72 | 66.24 |
| KRG93454 | Soybean | mitochondrion | 86.05 | 64.05 |
| KRH66279 | Soybean | cytosol | 22.11 | 35.52 |
| CDX85197 | Canola | plastid | 26.53 | 35.14 |
| KRH77166 | Soybean | plasma membrane | 27.21 | 29.85 |
| KRH28321 | Soybean | extracellular, plasma membrane | 26.87 | 29.37 |
| CDX86433 | Canola | plasma membrane | 51.36 | 26.96 |
| AT3G28450.1 | Thale cress | plasma membrane | 54.76 | 26.61 |
| VIT_14s0066g02250.t01 | Wine grape | plasma membrane | 55.1 | 26.43 |
| Bra025334.1-P | Field mustard | plasma membrane | 51.36 | 25.42 |
| Solyc02g087460.1.1 | Tomato | plasma membrane | 51.7 | 25.29 |
| PGSC0003DMT400017876 | Potato | plasma membrane | 52.38 | 25.16 |
| CDY04020 | Canola | plasma membrane | 51.36 | 25.08 |
| Solyc02g067560.1.1 | Tomato | golgi, plasma membrane, vacuole | 51.36 | 25.04 |
| PGSC0003DMT400003278 | Potato | plasma membrane | 51.02 | 24.96 |
| Bra033046.1-P | Field mustard | cytosol | 47.96 | 24.56 |
| CDY47244 | Canola | plasma membrane | 48.98 | 23.96 |
| KRH21657 | Soybean | cytosol | 31.63 | 21.99 |
| KRH66278 | Soybean | cytosol | 30.27 | 19.39 |
| KRH40243 | Soybean | plasma membrane | 36.39 | 17.34 |
| KRH07291 | Soybean | plasma membrane | 36.05 | 17.26 |
| KRH00983 | Soybean | nucleus, plasma membrane | 35.71 | 16.99 |
| KRH42002 | Soybean | plasma membrane | 35.03 | 16.32 |
| KRH41999 | Soybean | cytosol, golgi, plasma membrane | 32.99 | 15.77 |
| CDX85198 | Canola | golgi, plasma membrane | 12.24 | 9.47 |
| KRH66274 | Soybean | plasma membrane | 14.29 | 9.31 |
| KRH66277 | Soybean | plasma membrane | 14.29 | 9.31 |
| Zm00001d006033_P032 | Maize | plastid | 9.86 | 4.62 |
| KRH42000 | Soybean | vacuole | 4.42 | 3.37 |
| KRH21659 | Soybean | cytosol | 2.38 | 2.97 |
| Zm00001d021202_P030 | Maize | plastid | 0.0 | 0.0 |
| Zm00001d016331_P001 | Maize | vacuole | 0.0 | 0.0 |
| KRG88547 | Soybean | cytosol | 0.0 | 0.0 |
| KRH21660 | Soybean | cytosol | 0.0 | 0.0 |
| KRH37646 | Soybean | cytosol | 0.0 | 0.0 |
| KRH66275 | Soybean | mitochondrion, plasma membrane | 0.0 | 0.0 |
| KRH49900 | Soybean | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A0R0GJC9 | EMBL:ACUP02008090 | EnsemblPlantsGene:GLYMA_13G0671001 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR001611 |
| InterPro:IPR032675 | EnsemblPlants:KRH18545 | ProteinID:KRH18545 | ProteinID:KRH18545.1 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf |
| InterPro:Leu-rich_rpt | PFAM:PF08263 | PFAM:PF13855 | PANTHER:PTHR44101 | PANTHER:PTHR44101:SF2 | SUPFAM:SSF52058 |
| SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0006ED4F22 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr13:-:16679561..16680442
Molecular Weight (calculated)
32210.9 Da
IEP (calculated)
9.390
GRAVY (calculated)
0.030
Length
294 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRSNTFSSS FLLLILLGFH FHVFFVSSQV EGDVRCLKGI KETLSDPLNR LSDWRFDNTT IGFICKFAGV SCWNDRENRV LSLTLRDFKL SGKIPEALKH
101: CGKNIQKLDL ASNSFSLEIP REICSWMPFL VSLDLSSNQL SGFIPPTIEK CSYLNELVLS NNQLSGSIPF EFGSLGRLRK FSVANNRLSG TISEFFNRFD
201: REGFEGNSGL CGGPLGGKCG GMSKKNLAII IAAGVFGAAA SLLLAFGLWW WYHLSGKKKK GHGVGSGVGG GGGDWALRLR GYKLCAGSLF QNPI
101: CGKNIQKLDL ASNSFSLEIP REICSWMPFL VSLDLSSNQL SGFIPPTIEK CSYLNELVLS NNQLSGSIPF EFGSLGRLRK FSVANNRLSG TISEFFNRFD
201: REGFEGNSGL CGGPLGGKCG GMSKKNLAII IAAGVFGAAA SLLLAFGLWW WYHLSGKKKK GHGVGSGVGG GGGDWALRLR GYKLCAGSLF QNPI
001: MTRSHRLLLL LLLIFQTAQR LTTADPNDEA CLKNLRQNLE DPASNLRNWT NSVFSNPCSG FTSYLPGATC NNGRIYKLSL TNLSLRGSIS PFLSNCTNLQ
101: SLDLSSNQIS GVIPPEIQYL VNLAVLNLSS NHLSGEITPQ LALCAYLNVI DLHDNELSGQ IPQQLGLLAR LSAFDVSNNK LSGQIPTYLS NRTGNFPRFN
201: ASSFIGNKGL YGYPLQEMMM KSKGLSVMAI VGIGLGSGIA SLMISFTGVC LWLRITEKKI VEEEGKISQS MPDY
101: SLDLSSNQIS GVIPPEIQYL VNLAVLNLSS NHLSGEITPQ LALCAYLNVI DLHDNELSGQ IPQQLGLLAR LSAFDVSNNK LSGQIPTYLS NRTGNFPRFN
201: ASSFIGNKGL YGYPLQEMMM KSKGLSVMAI VGIGLGSGIA SLMISFTGVC LWLRITEKKI VEEEGKISQS MPDY
Arabidopsis Description
AtRLP44RLP44 [Source:UniProtKB/TrEMBL;Acc:A0A178VI92]
SUBAcon: [plasma membrane,extracellular]
SUBAcon: [plasma membrane,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.