CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
CDX73678
CDX92401
CDX95314
CDY06478
CDY23174

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G28450.1	CDX73678	AT3G51920.1	17360592
AT3G28450.1	CDX95314	AT3G51920.1	17360592
AT3G28450.1	CDY23174	AT3G51920.1	17360592
AT3G28450.1	CDY06478	AT4G14640.1	17360592
AT3G28450.1	CDX92401	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033046.1-P	Field mustard	cytosol	94.51	98.95
CDY04020	Canola	plasma membrane	95.84	95.68
CDX85198	Canola	golgi, plasma membrane	51.91	82.11
AT3G28450.1	Thale cress	plasma membrane	81.2	80.66
CDX86433	Canola	plasma membrane	74.38	79.82
VIT_14s0066g02250.t01	Wine grape	plasma membrane	61.73	60.52
Solyc02g067560.1.1	Tomato	golgi, plasma membrane, vacuole	60.57	60.36
PGSC0003DMT400017876	Potato	plasma membrane	61.23	60.13
Solyc02g087460.1.1	Tomato	plasma membrane	59.4	59.4
PGSC0003DMT400003278	Potato	plasma membrane	59.23	59.23
CDY16228	Canola	plasma membrane	55.91	56.09
CDY14686	Canola	plasma membrane	55.41	55.78
KRG93454	Soybean	mitochondrion	36.61	55.7
CDY38780	Canola	plasma membrane	52.75	52.83
CDY11627	Canola	plasma membrane	52.08	52.6
KRH18545	Soybean	plasma membrane	23.96	48.98
CDX85197	Canola	plastid	17.97	48.65
KRH18546	Soybean	extracellular	17.64	45.3
CDX86309	Canola	golgi, mitochondrion, plasma membrane, plastid	34.44	44.23
CDX85334	Canola	plasma membrane	44.76	43.18
CDY48749	Canola	plasma membrane	44.09	42.54
CDY05685	Canola	plasma membrane	44.09	42.4
Zm00001d016331_P001	Maize	vacuole	14.81	39.73
CDY38095	Canola	plasma membrane	16.81	38.11
CDY38092	Canola	plasma membrane	16.81	37.69
CDX85492	Canola	plasma membrane	16.81	37.69
CDX69430	Canola	extracellular	13.81	34.73
CDY07991	Canola	plasma membrane	14.48	33.59
CDY16992	Canola	cytosol, plasma membrane, plastid	11.15	33.33
CDX81298	Canola	extracellular, plasma membrane	13.31	32.92
CDY18672	Canola	mitochondrion, plasma membrane	13.14	32.51
CDY05959	Canola	extracellular, plasma membrane	14.81	32.25
Zm00001d021202_P030	Maize	plastid	24.46	32.24
Zm00001d006033_P032	Maize	plastid	29.28	28.03
CDX70708	Canola	extracellular, plasma membrane, vacuole	15.81	26.54

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.10.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078ID21	UniProt:A0A078ID21
EnsemblPlants:CDY47244	ProteinID:CDY47244	ProteinID:CDY47244.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00086963001	InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	PFAM:PF07714	PFAM:PF08263	PRINTS:PR00019	PFscan:PS50011
PANTHER:PTHR44101	PANTHER:PTHR44101:SF2	InterPro:Prot_kinase_dom	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EDB4A0	SEG:seg	:	:

Description

BnaA02g29300DBnaA02g29300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ID21]

Coordinates

chrLK032704:+:93527..95555

Molecular Weight (calculated)

66391.0 Da

IEP (calculated)

5.995

GRAVY (calculated)

-0.032

Length

601 amino acids

Sequence
(BLAST)

001: MEKIIPNLLP SSIIIILLLL CSSPPAMAAD EDDIRCLKGI QTSLTDPQGA LRSWNFANTT LGFLCNFVGV SCWNNQENRV INLELRDMGL SGRIPESLQY
101: CGSLQKLDLS TNRLSGNIPP QLCTWLPFLV SLDLSNNDLN GEVPPSLAEC RFVNSLVLSK NRLTGQIPVQ LSSLGRLATF SISDNDLTGR IPSFFASSAK
201: YSSDDFAGNK RLCGRPLSST CGGISKKNLA IIVAAGVIGA AASTLLAFGV WWYYYNRTRK RRTLNEEGVS TLARRLISHK LLQVSLFQKP LVKVKLGDLM
301: AATNGFSSEN VIVTTRTGTT YKAVLPDGSA LAVKHLSECK LGEKEFRYEM NRLWELRHPN LAPLLGFCVV EEERLLVYKY MSNGTLMSLL EGDEELDWLT
401: RFRIGLGAAR GLAWLHHGCR PSILHQNICS SVILVDEDFD ARIVDSGLAR LMVPLDNNES SFMTGDLGEF GYVAPEYSTT MLASLKGDVY GLGVVLLELA
501: TGVKALGKEG FKGSLVDWVK HLESSGRLVD AIDEEIRGKG CDDEIIKFVE VACNCVASRP KERWSMFKAY QSLRAMAEKQ GYSFTEQDED FPLIFNTQEN
601: E

Best Arabidopsis Sequence Match ( AT3G28450.1 )
(BLAST)

001: MKEIGSKPRK LLPLCFIIFL CFCSSVMAAD EDDIRCLRGL KASLTDPQNA LKSWNFDNTT LGFLCNFVGV SCWNNQENRV INLELRDMGL SGKIPDSLQY
101: CASLQKLDLS SNRLSGNIPT ELCNWLPFLV SLDLSNNELN GEIPPDLAKC SFVNSLVLSD NRLSGQIPVQ FSALGRLGRF SVANNDLSGR IPVFFSSPSY
201: SSDDFSGNKG LCGRPLSSSC GGLSKKNLGI IIAAGVFGAA ASMLLAFGIW WYYHLKWTRR RRSGLTEVGV SGLAQRLRSH KLTQVSLFQK PLVKVKLGDL
301: MAATNNFNSE NIIVSTRTGT TYKALLPDGS ALAVKHLSTC KLGEREFRYE MNQLWELRHS NLAPLLGFCV VEEEKFLVYK YMSNGTLHSL LDSNRGELDW
401: STRFRIGLGA ARGLAWLHHG CRPPILHQNI CSSVILIDED FDARIIDSGL ARLMVPSDNN ESSFMTGDLG EFGYVAPEYS TTMLASLKGD VYGLGVVLLE
501: LATGLKAVGG EGFKGSLVDW VKQLESSGRI AETFDENIRG KGHDEEISKF VEIALNCVSS RPKERWSMFQ AYQSLKAIAE KQGYSFSEQD DDFPLIFDTQ
601: ENEKV

Arabidopsis Description

BIR2Inactive LRR receptor-like serine/threonine-protein kinase BIR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSI9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.