CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38780	Canola	plasma membrane	93.45	92.67
AT1G69990.1	Thale cress	plasma membrane	78.32	78.85
CDY16228	Canola	plasma membrane	73.45	72.95
CDY14686	Canola	plasma membrane	72.77	72.53
VIT_01s0026g01060.t01	Wine grape	plasma membrane	61.01	59.41
Solyc05g006570.1.1	Tomato	plasma membrane	58.82	57.38
PGSC0003DMT400058291	Potato	plasma membrane	58.99	57.07
CDX85198	Canola	golgi, plasma membrane	33.61	52.63
CDY04020	Canola	plasma membrane	52.94	52.33
CDY47244	Canola	plasma membrane	52.6	52.08
CDX86433	Canola	plasma membrane	46.05	48.93
Zm00001d016331_P001	Maize	vacuole	16.47	43.75
CDX85334	Canola	plasma membrane	43.19	41.25
CDX86309	Canola	golgi, mitochondrion, plasma membrane, plastid	32.27	41.03
CDY48749	Canola	plasma membrane	41.51	39.65
CDY05685	Canola	plasma membrane	41.51	39.52
CDY38095	Canola	plasma membrane	16.3	36.6
CDY05959	Canola	extracellular, plasma membrane	16.97	36.59
CDX85492	Canola	plasma membrane	16.3	36.19
CDY38092	Canola	plasma membrane	16.13	35.82
CDX69430	Canola	extracellular	13.95	34.73
CDY18672	Canola	mitochondrion, plasma membrane	14.12	34.57
CDX81298	Canola	extracellular, plasma membrane	14.12	34.57
CDY07991	Canola	plasma membrane	14.62	33.59
CDX85197	Canola	plastid	12.27	32.88
CDY16992	Canola	cytosol, plasma membrane, plastid	10.92	32.34
Zm00001d021202_P030	Maize	plastid	24.2	31.58
Zm00001d006033_P032	Maize	plastid	30.25	28.66
CDX70708	Canola	extracellular, plasma membrane, vacuole	14.62	24.3

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.10.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:A0A078FF67	UniProt:A0A078FF67
EnsemblPlants:CDY11627	ProteinID:CDY11627	ProteinID:CDY11627.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00049757001	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
PFAM:PF07714	PFAM:PF08263	PFAM:PF13516	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR44101
PANTHER:PTHR44101:SF4	InterPro:Prot_kinase_dom	SMART:SM00369	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EEB796	SEG:seg	:	:

Description

BnaC06g31120DBnaC06g31120D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FF67]

Coordinates

chrLK032012:+:604185..605972

Molecular Weight (calculated)

65133.0 Da

IEP (calculated)

6.149

GRAVY (calculated)

-0.042

Length

595 amino acids

Sequence
(BLAST)

001: MKIMMISTTF FIIILISSSS SYAEDDVLCL KGLKNSLTDP SGRLSNWSFP NSSSSSICKL TGVSCWNAKE NRILSLHLPS MQLAGKIPES LKLCRSLQSL
101: DLSGNDISSE IPPEICSWLP YLVTLDLSGN KLSGSIPSQI ADCKFLNGLA LNENKLTGPV PFQLTRLDRL QRLSLSDNDL SGSIPADLSR FGENGFTGNN
201: GLCGKPLSTC GTLNGENVTV IVIAGVTGAV GSLCVGFAVF WWFFIRDARR KNGYGAGESK DDGDWIGVLK SHKLVQVALF QKPIVKIRLV DLIVATDSFG
301: SDNVLVSSRT GVSYKADLPD GSALEVKRLS CGYEVGEKLF KSEVNRLGQI RHPNLVPLLG FCVVEDERLL VYKHMANGTL NSRLQGLDWP GRVRISVGAA
401: RGLAWLHHGC EHAYLHQYIS SNVILLDEDY DARVIDYGLG KLVSSTRDSN DSSFSNGDFG EVGYVAPEYA STMVASLSGD VYAFGVVLLE IVTGQKPLSI
501: NNGEDGFNGS LVDWVNRHLS DGRGKDVVDR CVIGKGYDDE MMQFLRIACS CVVMRPKERP LMVQVYESLK KLGDQYGFFS EHSDEFPLIF NKQEH

Best Arabidopsis Sequence Match ( AT1G69990.1 )
(BLAST)

001: MKTISIFFVI ILMSSSHAED DVLCLKGFKS SLKDPSNQLN TWSFPNSSSS ICKLTGVSCW NAKENRILSL QLQSMQLSGQ IPESLKLCRS LQSLDLSFND
101: FSGLIPSQIC SWLPYLVTLD LSGNKLSGSI PSQIVDCKFL NSLALNQNKL TGSIPSELTR LNRLQRLSLA DNDLSGSIPS ELSHYGEDGF RGNGGLCGKP
201: LSNCGSFNGK NLTIIVTAGV IGAVGSLCVG FGMFWWFFIR DRRKMNNYGY GAGKCKDDSD WIGLLRSHKL VQVTLFQKPI VKIKLVDLIE ATNGFDSGNI
301: VVSSRSGVSY KADLPDGSTL EVKRLSSCCE LSEKQFRSEI NKLGQIRHPN LVPLLGFCVV EDEILLVYKH MANGTLYSQL QQWDIDWPTR VRVAVGAARG
401: LAWLHHGCQP LYMHQYISSN VILLDEDFDA RVIDYGLGKL VSSQDSKDSS FSNGKFGYVA PEYSSTMVAS LSGDVYGFGI VLLEIVTGQK PVLINNGEEG
501: FKESLVEWVS KHLSNGRSKD AIDRRIFGKG YDDEIMQVLR IACSCVVSRP KERPLMIQVY ESLKNLGDQH GFFSEYSDEF PLIFNKQEHL K

Arabidopsis Description

Probable LRR receptor-like serine/threonine-protein kinase At1g69990 [Source:UniProtKB/Swiss-Prot;Acc:C0LGI5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.