Factsheet for PGSC0003DMT400003278

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	plasma membrane
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400014123
PGSC0003DMT400018569
PGSC0003DMT400034833
PGSC0003DMT400042062
PGSC0003DMT400046278
PGSC0003DMT400054299
PGSC0003DMT400058435
PGSC0003DMT400070437
PGSC0003DMT400097662

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G28450.1	PGSC0003DMT400014123	AT2G41090.1	17360592
AT3G28450.1	PGSC0003DMT400018569	AT2G41090.1	17360592
AT3G28450.1	PGSC0003DMT400046278	AT2G41090.1	17360592
AT3G28450.1	PGSC0003DMT400054299	AT2G41090.1	17360592
AT3G28450.1	PGSC0003DMT400058435	AT2G41090.1	17360592
AT3G28450.1	PGSC0003DMT400070437	AT2G41090.1	17360592
AT3G28450.1	PGSC0003DMT400097662	AT2G41090.1	17360592
AT3G28450.1	PGSC0003DMT400014123	AT2G41100.1	17360592
AT3G28450.1	PGSC0003DMT400018569	AT2G41100.1	17360592
AT3G28450.1	PGSC0003DMT400046278	AT2G41100.1	17360592
AT3G28450.1	PGSC0003DMT400054299	AT2G41100.1	17360592
AT3G28450.1	PGSC0003DMT400058435	AT2G41100.1	17360592
AT3G28450.1	PGSC0003DMT400070437	AT2G41100.1	17360592
AT3G28450.1	PGSC0003DMT400097662	AT2G41100.1	17360592
AT3G28450.1	PGSC0003DMT400034833	AT4G14640.1	17360592
AT3G28450.1	PGSC0003DMT400042062	AT4G14640.1	17360592
AT3G28450.1	PGSC0003DMT400014123	AT5G21274.1	17360592
AT3G28450.1	PGSC0003DMT400018569	AT5G21274.1	17360592
AT3G28450.1	PGSC0003DMT400046278	AT5G21274.1	17360592
AT3G28450.1	PGSC0003DMT400054299	AT5G21274.1	17360592
AT3G28450.1	PGSC0003DMT400058435	AT5G21274.1	17360592
AT3G28450.1	PGSC0003DMT400070437	AT5G21274.1	17360592
AT3G28450.1	PGSC0003DMT400097662	AT5G21274.1	17360592

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g087460.1.1	Tomato	plasma membrane	95.17	95.17
PGSC0003DMT400017876	Potato	plasma membrane	76.37	75.0
VIT_14s0066g02250.t01	Wine grape	plasma membrane	66.89	65.58
CDX85198	Canola	golgi, plasma membrane	40.1	63.42
Bra033046.1-P	Field mustard	cytosol	59.07	61.85
AT3G28450.1	Thale cress	plasma membrane	61.56	61.16
CDY04020	Canola	plasma membrane	60.23	60.13
CDY47244	Canola	plasma membrane	59.23	59.23
Bra025334.1-P	Field mustard	plasma membrane	57.9	58.59
PGSC0003DMT400058291	Potato	plasma membrane	58.74	57.4
PGSC0003DMT400085762	Potato	extracellular	19.97	57.14
CDX86433	Canola	plasma membrane	53.24	57.14
KRG93454	Soybean	mitochondrion	35.61	54.18
KRH18545	Soybean	plasma membrane	24.96	51.02
KRH18546	Soybean	extracellular	16.97	43.59
PGSC0003DMT400071183	Potato	plasma membrane	43.43	42.58
Zm00001d016331_P001	Maize	vacuole	15.81	42.41
PGSC0003DMT400075495	Potato	plasma membrane	36.61	37.41
CDX85197	Canola	plastid	13.31	36.04
PGSC0003DMT400070657	Potato	peroxisome, plasma membrane, plastid	23.96	35.91
PGSC0003DMT400070664	Potato	cytosol, plasma membrane, plastid	21.8	35.5
PGSC0003DMT400075494	Potato	plasma membrane	34.28	35.4
Zm00001d021202_P030	Maize	plastid	25.79	33.99
PGSC0003DMT400093490	Potato	extracellular	14.97	33.71
PGSC0003DMT400070667	Potato	cytosol	12.15	33.03
PGSC0003DMT400070666	Potato	plastid	24.29	31.33
Zm00001d006033_P032	Maize	plastid	31.78	30.41
PGSC0003DMT400070694	Potato	cytosol	10.65	30.19

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102599851	MapMan:18.4.1.10.1	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524
GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
UniProt:M0ZLD1	PFAM:PF07714	PFAM:PF08263	PFAM:PF13516	EnsemblPlantsGene:PGSC0003DMG400001301	PGSC:PGSC0003DMG400001301
EnsemblPlants:PGSC0003DMT400003278	PFscan:PS50011	PANTHER:PTHR44101	PANTHER:PTHR44101:SF2	InterPro:Prot_kinase_dom	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00029633D0	RefSeq:XP_006338497.1
SEG:seg	:	:	:	:	:

Description

BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400001301]

Coordinates

chr2:-:46578477..46580854

Molecular Weight (calculated)

66235.5 Da

IEP (calculated)

7.394

GRAVY (calculated)

-0.081

Length

601 amino acids

Sequence
(BLAST)

001: MARFRFLLFL LLILISLVLP CLDATVVEDD LKCLEGFKKS LEDPDGNLNS WNFKNTTVGA ICKFTGVNCW NDNENRIISL SLSNINLGGK VTEPVQYCAS
101: LTTLDLSGNR FSGPIPSQIC TWLPFLVTLD LSGNDYSGPI PADLAKCIFL NKLSLSDNKL TGNIPPEFSS FGRLKSFSVA NNQLSGRIPA AFDSSNFNFE
201: GNSLCGGPLG KCGGLSKKSL AIIIAAGVFG AAASMLLAFG AWYWFFTKSG KRKRGYGVGR DDSDSWADKL RAHKLTQVML FQKPLVKVKL ADLLIATNGF
301: RTDNVINSTR MGTTYNAVLR DGSALAIKRL NTCKLSEKHF RDEMYRLGQL RHPNLVPLLG FCVVEEEKLL VYKHLSNGTL HSFLNGNASE LDWPTRFRIG
401: FGAARGLAWL HHGVHPPILH QNICSNVIFL DEDFDARVMD FGLARLMTSD AKESSYVNGE LGEFGYVAPE YSSTMVPSLK GDAYSFGVVL LELATGQKPL
501: EVTAGEEGFK GNLVDWVNQL SASGRIKDAI DQNMRGKGND EEIVQFLKVA CNSVVSRPND RWSMYQVYEA LQSMAEKQGF SEQYDEFPLL FGKEGATRSP
601: V

Best Arabidopsis Sequence Match ( AT3G28450.1 )
(BLAST)

001: MKEIGSKPRK LLPLCFIIFL CFCSSVMAAD EDDIRCLRGL KASLTDPQNA LKSWNFDNTT LGFLCNFVGV SCWNNQENRV INLELRDMGL SGKIPDSLQY
101: CASLQKLDLS SNRLSGNIPT ELCNWLPFLV SLDLSNNELN GEIPPDLAKC SFVNSLVLSD NRLSGQIPVQ FSALGRLGRF SVANNDLSGR IPVFFSSPSY
201: SSDDFSGNKG LCGRPLSSSC GGLSKKNLGI IIAAGVFGAA ASMLLAFGIW WYYHLKWTRR RRSGLTEVGV SGLAQRLRSH KLTQVSLFQK PLVKVKLGDL
301: MAATNNFNSE NIIVSTRTGT TYKALLPDGS ALAVKHLSTC KLGEREFRYE MNQLWELRHS NLAPLLGFCV VEEEKFLVYK YMSNGTLHSL LDSNRGELDW
401: STRFRIGLGA ARGLAWLHHG CRPPILHQNI CSSVILIDED FDARIIDSGL ARLMVPSDNN ESSFMTGDLG EFGYVAPEYS TTMLASLKGD VYGLGVVLLE
501: LATGLKAVGG EGFKGSLVDW VKQLESSGRI AETFDENIRG KGHDEEISKF VEIALNCVSS RPKERWSMFQ AYQSLKAIAE KQGYSFSEQD DDFPLIFDTQ
601: ENEKV

Arabidopsis Description

BIR2Inactive LRR receptor-like serine/threonine-protein kinase BIR2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LSI9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.