Factsheet for Solyc12g096720.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc04g072570.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G48380.1	Solyc04g072570.2.1	AT1G71830.1	19616764

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P28640_001	Banana	plastid	42.25	25.53
PGSC0003DMT400075494	Potato	plasma membrane	92.25	22.51
Bra038824.1-P	Field mustard	cytosol	42.25	18.13
Solyc12g096710.1.1	Tomato	plasma membrane	88.03	15.49
GSMUA_Achr2P05730_001	Banana	cytosol, peroxisome, plasma membrane	39.44	13.4
Solyc07g006480.2.1	Tomato	plasma membrane	60.56	13.17
KRH42000	Soybean	vacuole	34.51	12.69
Bra037490.1-P	Field mustard	plastid	41.55	12.61
CDX86309	Canola	golgi, mitochondrion, plasma membrane, plastid	41.55	12.61
GSMUA_Achr9P08150_001	Banana	cytosol, nucleus, plastid	32.39	11.47
Bra020705.1-P	Field mustard	plasma membrane	42.25	10.87
Zm00001d007277_P001	Maize	plasma membrane	42.96	10.39
Solyc06g082920.2.1	Tomato	plasma membrane	44.37	10.28
EES09539	Sorghum	plasma membrane	42.96	10.1
TraesCS4A01G229800.1	Wheat	plasma membrane	42.96	10.07
HORVU4Hr1G014760.3	Barley	plasma membrane	42.25	9.9
TraesCS4D01G084000.1	Wheat	plasma membrane	42.25	9.9
EES19530	Sorghum	plasma membrane	42.25	9.9
CDX85334	Canola	plasma membrane	42.96	9.79
TraesCS4B01G086300.1	Wheat	plasma membrane	41.55	9.74
AT5G48380.1	Thale cress	plasma membrane	42.25	9.68
CDY48749	Canola	plasma membrane	42.25	9.63
CDY05685	Canola	plasma membrane	42.25	9.6
Zm00001d038195_P001	Maize	plasma membrane	41.55	9.37
Solyc05g006570.1.1	Tomato	plasma membrane	40.14	9.34
HORVU1Hr1G064780.1	Barley	plasma membrane	39.44	9.27
TraesCS1D01G259400.1	Wheat	plasma membrane	39.44	9.27
TraesCS1A01G259600.1	Wheat	plasma membrane	39.44	9.26
TraesCS1B01G269900.1	Wheat	plasma membrane	39.44	9.26
Solyc02g067560.1.1	Tomato	golgi, plasma membrane, vacuole	38.03	8.96
Solyc02g087460.1.1	Tomato	plasma membrane	37.32	8.82
VIT_05s0094g01290.t01	Wine grape	mitochondrion	3.52	3.91
CDY16992	Canola	cytosol, plasma membrane, plastid	3.52	2.49
CDY38095	Canola	plasma membrane	4.23	2.26
CDX85492	Canola	plasma membrane	4.23	2.24
CDY38092	Canola	plasma membrane	4.23	2.24
CDX69430	Canola	extracellular	3.52	2.09
KXG33866	Sorghum	cytosol	3.52	2.03
Os01t0891601-01	Rice	extracellular, golgi, plasma membrane	3.52	1.94
TraesCS7A01G410600.1	Wheat	extracellular	3.52	1.91
TraesCS3A01G401000.1	Wheat	cytosol	2.11	1.74
TraesCS3A01G401300.1	Wheat	cytosol	2.82	1.67
TraesCS3D01G395400.1	Wheat	extracellular, golgi, plasma membrane	2.82	1.63
TraesCS3D01G395100.1	Wheat	extracellular, plasma membrane	2.82	1.53
TraesCS3B01G433700.1	Wheat	plasma membrane	2.82	1.52
TraesCS3D01G396100.1	Wheat	plasma membrane	2.82	1.5
TraesCS3A01G400800.1	Wheat	extracellular	2.82	1.5
TraesCS3D01G395700.1	Wheat	plasma membrane	2.82	1.49
TraesCS3A01G401200.1	Wheat	plasma membrane	2.82	1.48
TraesCS3B01G434100.1	Wheat	plasma membrane	2.82	1.48
TraesCS3B01G434200.1	Wheat	plasma membrane	2.82	1.47
TraesCS3D01G395900.1	Wheat	extracellular, golgi, plasma membrane	2.11	1.19
TraesCS3B01G434000.1	Wheat	plasma membrane	2.11	1.15
TraesCS3D01G395800.1	Wheat	plastid	2.82	1.13
TraesCS3A01G400700.1	Wheat	extracellular, plasma membrane	2.11	1.12
Solyc02g092040.1.1	Tomato	extracellular	2.11	1.12
TraesCS3A01G400900.1	Wheat	extracellular, plasma membrane	2.11	1.05
TraesCS3A01G401100.1	Wheat	extracellular, plasma membrane	2.11	1.05
TraesCS3B01G433900.1	Wheat	extracellular, mitochondrion, nucleus, plasma membrane	2.11	0.97
Bra006366.1-P	Field mustard	mitochondrion	2.11	0.92
CDX70708	Canola	extracellular, plasma membrane, vacuole	2.11	0.84
HORVU3Hr1G090040.1	Barley	extracellular, plasma membrane	1.41	0.8
TraesCS3D01G395600.1	Wheat	endoplasmic reticulum, vacuole	0.7	0.46
Bra040380.1-P	Field mustard	extracellular	0.7	0.43
Zm00001d039672_P001	Maize	plasma membrane	0.7	0.39
TraesCS3B01G433800.1	Wheat	extracellular	0.0	0.0
Solyc11g016930.1.1	Tomato	extracellular, nucleus, plasma membrane	0.0	0.0
Solyc11g015910.1.1	Tomato	extracellular	0.0	0.0
Os01t0891300-01	Rice	plasma membrane, plastid	0.0	0.0
CDY07991	Canola	plasma membrane	0.0	0.0
Bra001255.1-P	Field mustard	plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	UniProt:K4DHE5
InterPro:Kinase-like_dom_sf	PFAM:PF07714	PFscan:PS50011	PANTHER:PTHR44101	PANTHER:PTHR44101:SF1	InterPro:Prot_kinase_dom
SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	EnsemblPlantsGene:Solyc12g096720.1	EnsemblPlants:Solyc12g096720.1.1	UniParc:UPI0002769EBF	:

Description

No Description!

Coordinates

chr12:+:65522757..65523228

Molecular Weight (calculated)

16301.5 Da

IEP (calculated)

7.007

GRAVY (calculated)

-0.215

Length

142 amino acids

Sequence
(BLAST)

001: MHNGSLHEWL HSNEDKAKIL DFRLRVKIAL GIAKGLSWLH HGYRLHVTHG SISTRCILLD QNFEPKISNF WEAKIWSKND TALSWSLFPV AEYSCLGSYK
101: QDMYCFGVVL LELVTGKEPH ELASSRNLFD HSPCLLDADK DF

Best Arabidopsis Sequence Match ( AT5G48380.1 )
(BLAST)

001: MMMGRLVFVI WLYNCLCLLL LSSLVDADQA NIDCLRTFKS QVEDPNRYLS TWVFGNETAG YICKFSGVTC WHDDENRVLS IKLSGYGLRG VFPPAVKLCA
101: DLTGLDLSRN NFSGPLPANI STLIPLVTIL DLSYNSFSGE IPMLISNITF LNTLMLQHNQ FTGTLPPQLA QLGRLKTFSV SDNRLVGPIP NFNQTLQFKQ
201: ELFANNLDLC GKPLDDCKSA SSSRGKVVII AAVGGLTAAA LVVGVVLFFY FRKLGAVRKK QDDPEGNRWA KSLKGQKGVK VFMFKKSVSK MKLSDLMKAT
301: EEFKKDNIIA TGRTGTMYKG RLEDGSLLMI KRLQDSQRSE KEFDAEMKTL GSVKNRNLVP LLGYCVANKE RLLMYEYMAN GYLYDQLHPA DEESFKPLDW
401: PSRLKIAIGT AKGLAWLHHS CNPRIIHRNI SSKCILLTAE FEPKISDFGL ARLMNPIDTH LSTFVNGEFG DFGYVAPEYS RTMVATPKGD VYSFGVVLLE
501: LVTGQKATSV TKVSEEKAEE ENFKGNLVEW ITKLSSESKL QEAIDRSLLG NGVDDEIFKV LKVACNCVLP EIAKQRPTMF EVYQLLRAIG ESYNFTADDD
601: ILIPSESGEG DFIEELIVAR

Arabidopsis Description

BIR1Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Source:UniProtKB/Swiss-Prot;Acc:Q9ASS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.