Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G400800.1 | Wheat | extracellular | 88.35 | 88.35 |
| TraesCS3D01G395700.1 | Wheat | plasma membrane | 83.46 | 82.53 |
| TraesCS3B01G434100.1 | Wheat | plasma membrane | 79.7 | 78.52 |
| TraesCS3D01G395900.1 | Wheat | extracellular, golgi, plasma membrane | 71.8 | 75.49 |
| TraesCS3D01G395400.1 | Wheat | extracellular, golgi, plasma membrane | 67.67 | 73.47 |
| TraesCS3D01G395600.1 | Wheat | endoplasmic reticulum, vacuole | 56.77 | 69.27 |
| TraesCS3D01G395100.1 | Wheat | extracellular, plasma membrane | 63.91 | 65.13 |
| TraesCS3D01G395800.1 | Wheat | plastid | 79.32 | 59.44 |
| Os01t0891700-01 | Rice | plasma membrane | 55.26 | 48.04 |
| CDX69430 | Canola | extracellular | 39.1 | 43.51 |
| TraesCS2D01G344600.1 | Wheat | extracellular | 34.59 | 42.2 |
| CDY38095 | Canola | plasma membrane | 41.35 | 41.51 |
| CDY38092 | Canola | plasma membrane | 41.35 | 41.04 |
| CDX85492 | Canola | plasma membrane | 40.98 | 40.67 |
| CDY07991 | Canola | plasma membrane | 37.97 | 39.0 |
| CDY16992 | Canola | cytosol, plasma membrane, plastid | 28.95 | 38.31 |
| Bra040380.1-P | Field mustard | extracellular | 33.83 | 38.3 |
| Bra001255.1-P | Field mustard | plasma membrane | 35.71 | 36.68 |
| Bra006366.1-P | Field mustard | mitochondrion | 40.98 | 33.54 |
| CDX70708 | Canola | extracellular, plasma membrane, vacuole | 43.23 | 32.12 |
| PGSC0003DMT400070667 | Potato | cytosol | 25.94 | 31.22 |
| TraesCS5D01G168900.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 33.46 | 31.01 |
| VIT_05s0094g01290.t01 | Wine grape | mitochondrion | 13.53 | 28.12 |
| TraesCS1D01G259400.1 | Wheat | plasma membrane | 60.53 | 26.66 |
| TraesCS4D01G084000.1 | Wheat | plasma membrane | 47.74 | 20.96 |
| PGSC0003DMT400070664 | Potato | cytosol, plasma membrane, plastid | 26.69 | 19.24 |
| PGSC0003DMT400075494 | Potato | plasma membrane | 41.73 | 19.07 |
| VIT_00s2085g00010.t01 | Wine grape | plasma membrane | 44.36 | 19.06 |
| CDY48749 | Canola | plasma membrane | 43.98 | 18.78 |
| PGSC0003DMT400075495 | Potato | plasma membrane | 41.35 | 18.71 |
| VIT_00s0220g00120.t01 | Wine grape | plasma membrane | 43.23 | 18.52 |
| PGSC0003DMT400071183 | Potato | plasma membrane | 42.11 | 18.27 |
| PGSC0003DMT400070657 | Potato | peroxisome, plasma membrane, plastid | 27.44 | 18.2 |
| CDX85334 | Canola | plasma membrane | 42.11 | 17.98 |
| Solyc06g082920.2.1 | Tomato | plasma membrane | 41.35 | 17.94 |
| CDY05685 | Canola | plasma membrane | 42.11 | 17.92 |
| AT5G48380.1 | Thale cress | plasma membrane | 41.73 | 17.9 |
| GSMUA_Achr9P08150_001 | Banana | cytosol, nucleus, plastid | 26.69 | 17.71 |
| Bra020705.1-P | Field mustard | plasma membrane | 33.83 | 16.3 |
| Solyc07g006480.2.1 | Tomato | plasma membrane | 36.84 | 15.01 |
| Solyc12g096710.1.1 | Tomato | plasma membrane | 40.23 | 13.26 |
| GSMUA_Achr2P05730_001 | Banana | cytosol, peroxisome, plasma membrane | 16.92 | 10.77 |
| PGSC0003DMT400070666 | Potato | plastid | 17.67 | 10.09 |
| Bra037490.1-P | Field mustard | plastid | 15.04 | 8.55 |
| CDX86309 | Canola | golgi, mitochondrion, plasma membrane, plastid | 14.66 | 8.33 |
| GSMUA_Achr6P28640_001 | Banana | plastid | 3.01 | 3.4 |
| Solyc12g096720.1.1 | Tomato | cytosol | 1.5 | 2.82 |
| Bra038824.1-P | Field mustard | cytosol | 3.01 | 2.42 |
| TraesCS2D01G344700.1 | Wheat | vacuole | 2.26 | 2.32 |
| PGSC0003DMT400070694 | Potato | cytosol | 0.75 | 0.94 |
| KRH21660 | Soybean | cytosol | 0.38 | 0.63 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G396100.1 | EnsemblPlantsGene:TraesCS3D01G396100 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_N_plant-typ | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | PANTHER:PTHR44101 |
| PANTHER:PTHR44101:SF3 | PFAM:PF08263 | PFAM:PF13855 | PRINTS:PR00019 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF52058 | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr3D:-:511320412..511321212
Molecular Weight (calculated)
29610.5 Da
IEP (calculated)
8.145
GRAVY (calculated)
-0.014
Length
266 amino acids
Sequence
(BLAST)
(BLAST)
001: MADDTKFLLL FLLLSSSSLC FGTEQDIRCL KSVQRSLADP GGVLRSWDFE NDTDGYICRF TGVECWHPDE NKILSLRLGN LGLQGQFPVA LQNCSSLTGL
101: DLSNNNFSGP IPQDISRRMP YLTSLDLSYN SFSGLIPQNI SNMTYLNLLN LQHNQLSGQI PSQFSLLTRL TTFNVAGNLL SGPVPTLLQK FSSSNFAGNQ
201: GLCGSPLDEC STPRRRWRPI RIRLHRINDQ SSIGAAVGFV VGFVVAFYFP HCFVCSERLR AYVVRI
101: DLSNNNFSGP IPQDISRRMP YLTSLDLSYN SFSGLIPQNI SNMTYLNLLN LQHNQLSGQI PSQFSLLTRL TTFNVAGNLL SGPVPTLLQK FSSSNFAGNQ
201: GLCGSPLDEC STPRRRWRPI RIRLHRINDQ SSIGAAVGFV VGFVVAFYFP HCFVCSERLR AYVVRI
001: MKKIFITLLW LLFISSFLCS SSSAEDDVLC LQGLKNSLID PSSRLSSWSF PNSSASSICK LTGVSCWNEK ENRIISLQLQ SMQLAGEIPE SLKLCRSLQS
101: LDLSGNDLSG SIPSQICSWL PYLVTLDLSG NKLGGSIPTQ IVECKFLNAL ILSDNKLSGS IPSQLSRLDR LRRLSLAGND LSGTIPSELA RFGGDDFSGN
201: NGLCGKPLSR CGALNGRNLS IIIVAGVLGA VGSLCVGLVI FWWFFIREGS RKKKGYGAGK SKDDSDWIGL LRSHKLVQVT LFQKPIVKIK LGDLMAATNN
301: FSSGNIDVSS RTGVSYKADL PDGSALAVKR LSACGFGEKQ FRSEMNKLGE LRHPNLVPLL GYCVVEDERL LVYKHMVNGT LFSQLHNGGL CDAVLDWPTR
401: RAIGVGAAKG LAWLHHGCQP PYLHQFISSN VILLDDDFDA RITDYGLAKL VGSRDSNDSS FNNGDLGELG YVAPEYSSTM VASLKGDVYG FGIVLLELVT
501: GQKPLSVING VEGFKGSLVD WVSQYLGTGR SKDAIDRSIC DKGHDEEILQ FLKIACSCVV SRPKERPTMI QVYESLKNMA DKHGVSEHYD EFPLVFNKQE
601: A
101: LDLSGNDLSG SIPSQICSWL PYLVTLDLSG NKLGGSIPTQ IVECKFLNAL ILSDNKLSGS IPSQLSRLDR LRRLSLAGND LSGTIPSELA RFGGDDFSGN
201: NGLCGKPLSR CGALNGRNLS IIIVAGVLGA VGSLCVGLVI FWWFFIREGS RKKKGYGAGK SKDDSDWIGL LRSHKLVQVT LFQKPIVKIK LGDLMAATNN
301: FSSGNIDVSS RTGVSYKADL PDGSALAVKR LSACGFGEKQ FRSEMNKLGE LRHPNLVPLL GYCVVEDERL LVYKHMVNGT LFSQLHNGGL CDAVLDWPTR
401: RAIGVGAAKG LAWLHHGCQP PYLHQFISSN VILLDDDFDA RITDYGLAKL VGSRDSNDSS FNNGDLGELG YVAPEYSSTM VASLKGDVYG FGIVLLELVT
501: GQKPLSVING VEGFKGSLVD WVSQYLGTGR SKDAIDRSIC DKGHDEEILQ FLKIACSCVV SRPKERPTMI QVYESLKNMA DKHGVSEHYD EFPLVFNKQE
601: A
Arabidopsis Description
Probable inactive receptor kinase At1g27190 [Source:UniProtKB/Swiss-Prot;Acc:O04567]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.