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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 9
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
EpiLoc:plasma membrane
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400019238
PGSC0003DMT400027096
PGSC0003DMT400031321
PGSC0003DMT400050662
PGSC0003DMT400050728
PGSC0003DMT400055513
PGSC0003DMT400065377
PGSC0003DMT400070657
PGSC0003DMT400070664
PGSC0003DMT400070666
PGSC0003DMT400070667
PGSC0003DMT400070694
PGSC0003DMT400070819
PGSC0003DMT400071183
PGSC0003DMT400075494
PGSC0003DMT400075495

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G34210.1 PGSC0003DMT400070657 AT5G48380.1 19616764
AT1G34210.1 PGSC0003DMT400070664 AT5G48380.1 19616764
AT1G34210.1 PGSC0003DMT400070666 AT5G48380.1 19616764
AT1G34210.1 PGSC0003DMT400070667 AT5G48380.1 19616764
AT1G34210.1 PGSC0003DMT400070694 AT5G48380.1 19616764
AT1G34210.1 PGSC0003DMT400071183 AT5G48380.1 19616764
AT1G34210.1 PGSC0003DMT400075494 AT5G48380.1 19616764
AT1G34210.1 PGSC0003DMT400075495 AT5G48380.1 19616764
AT1G71830.1 PGSC0003DMT400070819 AT1G71830.1 11397085
AT1G71830.1 PGSC0003DMT400070819 AT1G71830.1 16621602
AT1G71830.1 PGSC0003DMT400065377 AT2G33500.1 16473966
AT1G71830.1 PGSC0003DMT400027096 AT3G09840.1 15592873
AT1G71830.1 PGSC0003DMT400031321 AT3G09840.1 15592873
AT1G71830.1 PGSC0003DMT400050662 AT3G09840.1 15592873
AT1G71830.1 PGSC0003DMT400055513 AT3G09840.1 15592873
AT1G71830.1 PGSC0003DMT400027096 AT3G09840.1 16473966
AT1G71830.1 PGSC0003DMT400031321 AT3G09840.1 16473966
AT1G71830.1 PGSC0003DMT400050662 AT3G09840.1 16473966
AT1G71830.1 PGSC0003DMT400055513 AT3G09840.1 16473966
AT1G71830.1 PGSC0003DMT400027096 AT3G09840.1 16621602
AT1G71830.1 PGSC0003DMT400031321 AT3G09840.1 16621602
AT1G71830.1 PGSC0003DMT400050662 AT3G09840.1 16621602
AT1G71830.1 PGSC0003DMT400055513 AT3G09840.1 16621602
AT1G71830.1 PGSC0003DMT400027096 AT3G09840.1 17693538
AT1G71830.1 PGSC0003DMT400031321 AT3G09840.1 17693538
AT1G71830.1 PGSC0003DMT400050662 AT3G09840.1 17693538
AT1G71830.1 PGSC0003DMT400055513 AT3G09840.1 17693538
AT1G71830.1 PGSC0003DMT400019238 AT3G54840.1 16621602
AT1G71830.1 PGSC0003DMT400050728 AT4G39400.1 16473966
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc04g072570.2.1 Tomato extracellular 94.95 95.71
KRG91762 Soybean plasma membrane 89.12 90.54
KRH35013 Soybean plasma membrane 88.64 90.06
VIT_18s0164g00070.t01 Wine grape plasma membrane 88.17 89.58
Bra003911.1-P Field mustard plasma membrane 79.97 88.79
KRH70218 Soybean endoplasmic reticulum 86.59 87.98
AT1G34210.1 Thale cress plasma membrane 84.7 85.51
CDY36679 Canola plasma membrane 83.75 85.51
AT1G71830.1 Thale cress plasma membrane 84.23 85.44
CDX72833 Canola plasma membrane 83.6 84.8
CDX96350 Canola plasma membrane 83.6 84.8
GSMUA_Achr7P17210_001 Banana cytosol 65.46 84.18
Os08t0174700-01 Rice plasma membrane 82.02 83.33
TraesCS6D01G186900.2 Wheat plasma membrane 78.55 82.45
TraesCS7A01G293300.3 Wheat plasma membrane 80.76 82.32
TraesCS7D01G291200.3 Wheat plasma membrane 80.6 82.29
TraesCS6A01G203600.2 Wheat cytosol 79.02 82.27
TraesCS7B01G182300.1 Wheat plasma membrane 80.44 81.99
GSMUA_Achr2P14850_001 Banana plastid 80.6 81.76
KXG24562 Sorghum plasma membrane 81.23 81.62
GSMUA_Achr10P... Banana plasma membrane 80.44 81.47
GSMUA_AchrUn_... Banana plasma membrane 80.91 81.43
PGSC0003DMT400032797 Potato cytosol, plasma membrane, plastid 66.4 81.27
Os04t0457800-01 Rice plasma membrane 80.28 81.05
Zm00001d024430_P002 Maize plasma membrane 81.55 81.03
EES07030 Sorghum plasma membrane 79.97 80.99
Zm00001d016928_P010 Maize plasma membrane 79.65 80.67
Bra016112.1-P Field mustard plasma membrane 77.13 80.56
Zm00001d050868_P004 Maize plasma membrane 78.86 80.26
HORVU6Hr1G049080.7 Barley plasma membrane 79.5 80.25
TraesCS6B01G223700.3 Wheat plasma membrane 79.5 80.25
Zm00001d025580_P001 Maize plasma membrane 78.71 80.23
TraesCS2A01G343100.1 Wheat mitochondrion, plasma membrane 79.34 80.22
PGSC0003DMT400045607 Potato cytosol, plasma membrane, plastid 66.4 80.19
TraesCS2D01G321400.1 Wheat mitochondrion 79.18 80.06
TraesCS2B01G340700.1 Wheat plasma membrane 79.18 80.06
EES12285 Sorghum plasma membrane 78.39 79.9
GSMUA_Achr7P11620_001 Banana plasma membrane 80.91 79.78
HORVU7Hr1G068990.2 Barley mitochondrion 81.07 76.26
Zm00001d049480_P005 Maize plasma membrane 77.44 74.51
GSMUA_Achr10P... Banana mitochondrion 82.18 71.86
CDX68299 Canola plasma membrane 79.65 71.23
HORVU2Hr1G080020.6 Barley cytosol 79.02 70.76
Os06t0225300-01 Rice plasma membrane 54.42 56.01
PGSC0003DMT400041690 Potato plasma membrane 51.1 53.64
PGSC0003DMT400056093 Potato plasma membrane 50.16 52.65
PGSC0003DMT400019924 Potato cytosol 50.0 52.22
PGSC0003DMT400035086 Potato plasma membrane 49.05 51.83
PGSC0003DMT400007454 Potato plasma membrane 49.68 50.81
PGSC0003DMT400019446 Potato plasma membrane 49.21 50.24
PGSC0003DMT400026062 Potato plasma membrane 50.0 47.74
PGSC0003DMT400059959 Potato plasma membrane 46.21 47.56
PGSC0003DMT400028991 Potato plasma membrane 46.53 46.75
PGSC0003DMT400073093 Potato plasma membrane 45.27 45.92
PGSC0003DMT400018244 Potato plasma membrane 19.56 35.33
PGSC0003DMT400065173 Potato plasma membrane 31.23 32.95
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:11.3.2.1.2MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005102GO:GO:0005488GO:GO:0005515
GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typInterPro:LRR_dom_sfUniProt:M1CMS0PFAM:PF00069PFAM:PF08263EnsemblPlantsGene:PGSC0003DMG400027536
PGSC:PGSC0003DMG400027536EnsemblPlants:PGSC0003DMT400070819ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001
PANTHER:PTHR27001:SF494InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSInterPro:SERKSMART:SM00220SUPFAM:SSF52058
SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI000295A8CDSEG:seg:
Description
Somatic embryogenesis receptor-like kinase 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400027536]
Coordinates
chr4:-:62263329..62269822
Molecular Weight (calculated)
70041.7 Da
IEP (calculated)
6.014
GRAVY (calculated)
-0.081
Length
634 amino acids
Sequence
(BLAST)
001: MVKVMEKDAV VVSLVVWLIL VVHHLKLIYA NMEGDALHSL RVNLQDPNNV LQSWDPTLVN PCTWFHVTCN NDNSVIRVDL GNAALSGLLV PQLGLLKNLQ
101: YLHILSQTGF QVLIVTHALL KMQLYGSSQR QELYSNNISG LIPSDLGNLT NLVSLDLYLN NFVGPIPDSL GKLSKLRFLD LSNNRLSGVV PDNGSFSLFT
201: PISFANNLDL CGPVTGRPCP GSPPFSPPPP FVPPPPISAP GGNGATGAIA GGVAAGAALL FAAPAIAFAW WRRRKPQEYF FDVPAEEDPE VHLGQLKRFS
301: LRELQVATDS FSNKNILGRG GFGKVYKGRL ADGSLVAVKR LKEERTPGGE LQFQTEVEMI SMAVHRNLLR LRGFCMTPTE RLLVYPYMAN GSVASCLRER
401: PPSEPPLDWP TRKRIALGSA RGLSYLHDHC DPKIIHRDVK AANILLDEEF EAVVGDFGLA KLMDYKDTHV TTAVRGTIGH IAPEYLSTGK SSEKTDVFGY
501: GIMLLELITG QRAFDLARLA NDDDVMLLDW VKGLLKEKKL EMLVDPDLQN KYVEAEVEQL IQVALLCTQS NPMDRPKMSE VVRMLEGDGL AERWDEWQKV
601: EVLRQEVELA PHPGSDWLVD STENLHAVEL SGPR
Best Arabidopsis Sequence Match ( AT1G71830.1 )
(BLAST)
001: MESSYVVFIL LSLILLPNHS LWLASANLEG DALHTLRVTL VDPNNVLQSW DPTLVNPCTW FHVTCNNENS VIRVDLGNAE LSGHLVPELG VLKNLQYLEL
101: YSNNITGPIP SNLGNLTNLV SLDLYLNSFS GPIPESLGKL SKLRFLRLNN NSLTGSIPMS LTNITTLQVL DLSNNRLSGS VPDNGSFSLF TPISFANNLD
201: LCGPVTSHPC PGSPPFSPPP PFIQPPPVST PSGYGITGAI AGGVAAGAAL LFAAPAIAFA WWRRRKPLDI FFDVPAEEDP EVHLGQLKRF SLRELQVASD
301: GFSNKNILGR GGFGKVYKGR LADGTLVAVK RLKEERTPGG ELQFQTEVEM ISMAVHRNLL RLRGFCMTPT ERLLVYPYMA NGSVASCLRE RPPSQPPLDW
401: PTRKRIALGS ARGLSYLHDH CDPKIIHRDV KAANILLDEE FEAVVGDFGL AKLMDYKDTH VTTAVRGTIG HIAPEYLSTG KSSEKTDVFG YGIMLLELIT
501: GQRAFDLARL ANDDDVMLLD WVKGLLKEKK LEMLVDPDLQ TNYEERELEQ VIQVALLCTQ GSPMERPKMS EVVRMLEGDG LAEKWDEWQK VEILREEIDL
601: SPNPNSDWIL DSTYNLHAVE LSGPR
Arabidopsis Description
SERK1SERK1 [Source:UniProtKB/TrEMBL;Acc:A0A178W829]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.