Factsheet for PGSC0003DMT400059959

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 8
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g056370.2.1	Tomato	vacuole	97.56	97.56
VIT_07s0031g02910.t01	Wine grape	cytosol	70.78	76.09
KRH59648	Soybean	golgi, plasma membrane	68.83	71.14
Bra038656.1-P	Field mustard	cytosol	65.58	69.78
CDY41531	Canola	cytosol	65.58	69.78
CDX84436	Canola	cytosol	65.1	69.26
KRH40995	Soybean	plasma membrane	68.67	68.78
AT5G63710.3	Thale cress	plasma membrane	65.58	65.69
PGSC0003DMT400041690	Potato	plasma membrane	56.33	57.45
PGSC0003DMT400056093	Potato	plasma membrane	56.33	57.45
PGSC0003DMT400045607	Potato	cytosol, plasma membrane, plastid	43.83	51.43
PGSC0003DMT400032797	Potato	cytosol, plasma membrane, plastid	42.69	50.77
PGSC0003DMT400019924	Potato	cytosol	48.38	49.09
PGSC0003DMT400070819	Potato	plasma membrane	47.56	46.21
PGSC0003DMT400035086	Potato	plasma membrane	44.81	46.0
PGSC0003DMT400007454	Potato	plasma membrane	45.13	44.84
PGSC0003DMT400019446	Potato	plasma membrane	43.67	43.32
PGSC0003DMT400028991	Potato	plasma membrane	43.51	42.47
PGSC0003DMT400026062	Potato	plasma membrane	45.13	41.87
PGSC0003DMT400073093	Potato	plasma membrane	42.37	41.76
PGSC0003DMT400018244	Potato	plasma membrane	18.83	33.05
PGSC0003DMT400065173	Potato	plasma membrane	30.84	31.61

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102604943	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M1C4Z0	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855
EnsemblPlantsGene:PGSC0003DMG400023329	PGSC:PGSC0003DMG400023329	EnsemblPlants:PGSC0003DMT400059959	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF114	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	UniParc:UPI0002957987	RefSeq:XP_006345768.1	SEG:seg

Description

Plasma membrane receptor-like kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400023329]

Coordinates

chr5:-:51839691..51843813

Molecular Weight (calculated)

68981.8 Da

IEP (calculated)

7.076

GRAVY (calculated)

-0.189

Length

616 amino acids

Sequence
(BLAST)

001: MPTAFSFRNF HLNLLLFLLL CSNGLSSNDY DVEGHALIEL LRALNDSHNR IKDWNIDFVT PCFSWSHVTC KNGNVISLNL ASNGFSGTLS PSITKLKFLV
101: SLDLQNNDLS GALPDYLSSM SNLQNLNLAN NNFNGPIPPA WGQLYQLKYL VMRGNHITGT VPNSLTNITG LKELDLSSND LTGGIPLQLF SIPTYSFSGT
201: HLACGNRFQK PCVSSSSAPA SSRRPKLEVA ITGASCGAFL LLLVGAIVTY RCNYKRKLKQ DQFFDVEGDV ERNISLGQLR RFSWRELQIA TDNFSESNVI
301: GQGGFGKVYK GYLSDNTKVA VKRLTDYHNP GGEAAFLREV QLISVAVHRN LLRLIGFCTT SSERILVYPF MQNLSVAYRL RDLKPGEKAL DWPTRRRIAF
401: GAAHGLEYLH EHCDPKIIHR DLKAANILLD DNFEPVLGDF GLAKLVDTKL THITTQVRGT MGHIAPEYLS TGKSSEKTDV FGYGITLLEL VTGQRAIDFS
501: RLEEEEDVLL LDHIKKLLRE KRLGDIVDGN MKTYEPKEVE TILQVALLCT QSSPEERPKM AQVITMLKGV GLAEKWAEWE QLEEVRIQQF SLMSRQFMWA
601: EDSTHDQEAI QLSQAR

Best Arabidopsis Sequence Match ( AT5G63710.4 )
(BLAST)

001: MALAFVGITS STTQPDIEGG ALLQLRDSLN DSSNRLKWTR DFVSPCYSWS YVTCRGQSVV ALNLASSGFT GTLSPAITKL KFLVTLELQN NSLSGALPDS
101: LGNMVNLQTL NLSVNSFSGS IPASWSQLSN LKHLDLSSNN LTGSIPTQFF SIPTFDFSGT QLICGKSLNQ PCSSSSRLPV TSSKKKLRDI TLTASCVASI
201: ILFLGAMVMY HHHRVRRTKY DIFFDVAGED DRKISFGQLK RFSLREIQLA TDSFNESNLI GQGGFGKVYR GLLPDKTKVA VKRLADYFSP GGEAAFQREI
301: QLISVAVHKN LLRLIGFCTT SSERILVYPY MENLSVAYRL RDLKAGEEGL DWPTRKRVAF GSAHGLEYLH EHCNPKIIHR DLKAANILLD NNFEPVLGDF
401: GLAKLVDTSL THVTTQVRGT MGHIAPEYLC TGKSSEKTDV FGYGITLLEL VTGQRAIDFS RLEEEENILL LDHIKKLLRE QRLRDIVDSN LTTYDSKEVE
501: TIVQVALLCT QGSPEDRPAM SEVVKMLQGT GGLAEKWTEW EQLEEVRNKE ALLLPTLPAT WDEEETTVDQ ESIRLSTAR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:TAIR;Acc:AT5G63710]
SUBAcon: [plasma membrane,plastid,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.