Factsheet for PGSC0003DMT400007454

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	cytosol
iPSORT:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g005910.2.1	Tomato	plasma membrane	96.77	96.77
PGSC0003DMT400019446	Potato	plasma membrane	83.87	83.74
VIT_01s0010g01000.t01	Wine grape	plasma membrane	78.39	77.76
KRH75229	Soybean	plasma membrane	75.16	75.04
KRH71075	Soybean	plasma membrane	75.16	75.04
GSMUA_Achr3P28140_001	Banana	plasma membrane	71.13	71.71
TraesCS6B01G319700.1	Wheat	plasma membrane	70.81	70.24
TraesCS6D01G269400.1	Wheat	plasma membrane	70.81	70.13
TraesCS6A01G289500.1	Wheat	plasma membrane	70.32	69.87
EER88222	Sorghum	plasma membrane	70.16	69.16
EES05592	Sorghum	plasma membrane	69.19	68.53
Zm00001d017913_P001	Maize	plasma membrane	68.71	67.83
TraesCS7B01G118100.1	Wheat	plasma membrane	68.23	67.68
TraesCS7D01G212800.1	Wheat	plasma membrane	68.06	67.52
HORVU7Hr1G043030.2	Barley	plasma membrane	67.9	67.36
TraesCS7A01G211100.1	Wheat	plasma membrane	67.9	67.36
PGSC0003DMT400026062	Potato	plasma membrane	72.1	67.32
PGSC0003DMT400019924	Potato	cytosol	65.81	67.22
GSMUA_Achr9P19160_001	Banana	plasma membrane	66.77	66.45
Zm00001d037297_P002	Maize	plasma membrane	69.03	65.05
Zm00001d018347_P001	Maize	cytosol	8.39	65.0
PGSC0003DMT400035086	Potato	plasma membrane	62.26	64.33
Os06t0274500-01	Rice	extracellular	65.97	63.91
GSMUA_Achr1P09620_001	Banana	plasma membrane	71.94	63.62
HORVU6Hr1G072620.29	Barley	plasma membrane	70.81	63.62
GSMUA_Achr1P16110_001	Banana	plasma membrane	69.03	63.6
GSMUA_Achr9P14620_001	Banana	plasma membrane	71.61	63.34
GSMUA_Achr3P06260_001	Banana	plasma membrane	67.42	60.84
PGSC0003DMT400028991	Potato	plasma membrane	61.13	60.06
GSMUA_Achr7P06010_001	Banana	plasma membrane	68.87	59.06
Zm00001d045728_P003	Maize	plasma membrane	68.39	58.24
PGSC0003DMT400032797	Potato	cytosol, plasma membrane, plastid	46.61	55.79
PGSC0003DMT400045607	Potato	cytosol, plasma membrane, plastid	46.77	55.24
Os02t0728500-01	Rice	extracellular, plasma membrane	27.74	53.09
PGSC0003DMT400073093	Potato	plasma membrane	52.58	52.16
PGSC0003DMT400070819	Potato	plasma membrane	50.81	49.68
PGSC0003DMT400041690	Potato	plasma membrane	46.13	47.35
PGSC0003DMT400056093	Potato	plasma membrane	45.97	47.19
PGSC0003DMT400059959	Potato	plasma membrane	44.84	45.13
PGSC0003DMT400018244	Potato	plasma membrane	19.35	34.19
PGSC0003DMT400065173	Potato	plasma membrane	32.9	33.94

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:102601909	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	UniProt:M0ZT08	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855
EnsemblPlantsGene:PGSC0003DMG400002870	PGSC:PGSC0003DMG400002870	EnsemblPlants:PGSC0003DMT400007454	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF217	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002968F3C	RefSeq:XP_006344295.1
SEG:seg	:	:	:	:	:

Description

Leucine-rich repeat receptor-like kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400002870]

Coordinates

chr4:-:489822..494314

Molecular Weight (calculated)

68839.0 Da

IEP (calculated)

7.401

GRAVY (calculated)

-0.195

Length

620 amino acids

Sequence
(BLAST)

001: MKAILGYLYL FNFLAYYAHA MLTPAGVNYE VQALMEIKKN LDDPHNVLNW DGDAVDPCSW NMVTCSYDKF VTSLESPSQN LSGKISPYIH NLTHLELILL
101: QSNNISGSIP MELGMLKKLK TIDLSDNKLT GEIPSSLAQL KGLQYLRLNN NSLTGAIPLD LANMTQLSLM DLSFNNLSGP VPRLLAKTFN ILGNPMICAT
201: GKESECNGTT PMPLSFSSSN PQNVQPSGKP KTHKAALAFG TSLGCIFLLI VGFGFFLWWR QKHNKQIFFD SNEHHIEEVC LGNLRRFQFK ELQSATNNFS
301: SKNILGKGGF GNVYKGRLSD GIIVAVKRLK DGNAVGGNQQ FQTEVALISL AVHRNLLRLY GFCMTPTERL LVYPYMSNGS VASRLKAKPT LDWGTRKGIA
401: LGSARGLLYL HEQCDPKIIH RDVKAANILL DDYCEAVVGD FGLAKLLDHH DSHVTTAVRG TVGHIAPEYL STGQSSDKTD VFGFGILLLE LITGQRALEF
501: GKAANQKGAM LDWVRKIQQE KKLDMLVDKD MKNEYDTIEL EEMVQVALLC TQYHPSHRPK MSEVVRMLEG DGLAEKWEAS QRAEPTRCSR ANEFSSSERY
601: SDLTDDSSLL VQAMELSGPR

Best Arabidopsis Sequence Match ( AT3G25560.1 )
(BLAST)

001: MLQGRREAKK SYALFSSTFF FFFICFLSSS SAELTDKGVN FEVVALIGIK SSLTDPHGVL MNWDDTAVDP CSWNMITCSD GFVIRLEAPS QNLSGTLSSS
101: IGNLTNLQTV LLQNNYITGN IPHEIGKLMK LKTLDLSTNN FTGQIPFTLS YSKNLQYLRV NNNSLTGTIP SSLANMTQLT FLDLSYNNLS GPVPRSLAKT
201: FNVMGNSQIC PTGTEKDCNG TQPKPMSITL NSSQNKSSDG GTKNRKIAVV FGVSLTCVCL LIIGFGFLLW WRRRHNKQVL FFDINEQNKE EMCLGNLRRF
301: NFKELQSATS NFSSKNLVGK GGFGNVYKGC LHDGSIIAVK RLKDINNGGG EVQFQTELEM ISLAVHRNLL RLYGFCTTSS ERLLVYPYMS NGSVASRLKA
401: KPVLDWGTRK RIALGAGRGL LYLHEQCDPK IIHRDVKAAN ILLDDYFEAV VGDFGLAKLL DHEESHVTTA VRGTVGHIAP EYLSTGQSSE KTDVFGFGIL
501: LLELITGLRA LEFGKAANQR GAILDWVKKL QQEKKLEQIV DKDLKSNYDR IEVEEMVQVA LLCTQYLPIH RPKMSEVVRM LEGDGLVEKW EASSQRAETN
601: RSYSKPNEFS SSERYSDLTD DSSVLVQAME LSGPR

Arabidopsis Description

NIK2NSP-interacting kinase 2 [Source:UniProtKB/TrEMBL;Acc:F4JA15]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.