Factsheet for TraesCS6D01G269400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G289500.1	Wheat	plasma membrane	99.04	99.36
TraesCS6B01G319700.1	Wheat	plasma membrane	99.04	99.2
HORVU6Hr1G072620.29	Barley	plasma membrane	97.28	88.26
EES05592	Sorghum	plasma membrane	86.42	86.42
Zm00001d017913_P001	Maize	plasma membrane	86.26	85.99
TraesCS7D01G212800.1	Wheat	plasma membrane	82.27	82.4
Os02t0728500-01	Rice	extracellular, plasma membrane	40.1	77.47
VIT_14s0083g00620.t01	Wine grape	plasma membrane	74.76	75.24
KRH01456	Soybean	plasma membrane	74.44	74.8
KRH45170	Soybean	plasma membrane	74.12	74.48
VIT_01s0010g01000.t01	Wine grape	plasma membrane	73.64	73.76
GSMUA_Achr3P28140_001	Banana	plasma membrane	72.2	73.5
Solyc02g089550.2.1	Tomato	plasma membrane	72.84	72.84
KRG93765	Soybean	plasma membrane	72.36	72.6
KRH18305	Soybean	plasma membrane	71.41	71.63
AT5G16000.1	Thale cress	plasma membrane	72.84	71.47
KRH75229	Soybean	plasma membrane	70.61	71.18
KRH71075	Soybean	plasma membrane	70.29	70.85
PGSC0003DMT400007454	Potato	plasma membrane	70.13	70.81
CDX69484	Canola	plasma membrane	71.57	70.66
Bra008659.1-P	Field mustard	plasma membrane	71.57	70.66
CDY26481	Canola	plasma membrane	71.57	70.33
Solyc04g005910.2.1	Tomato	plasma membrane	69.33	70.0
PGSC0003DMT400019446	Potato	plasma membrane	69.33	69.89
Solyc05g010400.2.1	Tomato	plasma membrane	69.01	69.57
GSMUA_Achr9P19160_001	Banana	plasma membrane	68.69	69.02
PGSC0003DMT400026062	Potato	plasma membrane	72.52	68.37
GSMUA_Achr9P14620_001	Banana	plasma membrane	76.52	68.33
Bra025145.1-P	Field mustard	plasma membrane	57.83	67.41
CDX83534	Canola	plasma membrane	67.73	66.25
CDY48073	Canola	plasma membrane	67.57	66.09
GSMUA_Achr1P16110_001	Banana	plasma membrane	70.93	65.97
GSMUA_Achr3P06260_001	Banana	plasma membrane	72.2	65.79
AT3G25560.3	Thale cress	plasma membrane	67.41	65.22
GSMUA_Achr1P09620_001	Banana	plasma membrane	73.0	65.19
GSMUA_Achr7P06010_001	Banana	plasma membrane	72.2	62.52
TraesCS3D01G091000.2	Wheat	plasma membrane	62.14	61.36
CDX78667	Canola	golgi, plasma membrane	69.33	60.03
CDX70667	Canola	endoplasmic reticulum, golgi	69.01	60.0
Bra006335.1-P	Field mustard	plasma membrane	64.06	59.06
TraesCS7D01G416400.1	Wheat	plasma membrane	60.86	58.8
TraesCS6D01G186900.2	Wheat	plasma membrane	51.6	53.48
TraesCS6D01G146100.1	Wheat	plasma membrane	52.24	52.24
TraesCS7D01G291200.3	Wheat	plasma membrane	51.76	52.17
TraesCS2D01G321400.1	Wheat	mitochondrion	51.76	51.67
TraesCS3D01G299800.1	Wheat	plasma membrane	46.96	48.59
TraesCS7D01G134300.3	Wheat	plasma membrane	44.73	45.09
TraesCS1D01G116300.1	Wheat	plasma membrane	42.17	42.79
TraesCS5D01G007200.1	Wheat	plasma membrane	33.71	34.09
TraesCS3D01G173200.1	Wheat	golgi, plasma membrane	18.85	33.91
TraesCS4D01G212600.1	Wheat	plasma membrane	31.31	33.28

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF07714	PFAM:PF08263	PFAM:PF13855	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR27001	PANTHER:PTHR27001:SF220	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser-Thr/Tyr_kinase_cat_dom	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6D01G269400	EnsemblPlants:TraesCS6D01G269400.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr6D:+:379563641..379566890

Molecular Weight (calculated)

68776.1 Da

IEP (calculated)

7.383

GRAVY (calculated)

-0.092

Length

626 amino acids

Sequence
(BLAST)

001: MEAVPLLLLL LLLLLSSPLA PAPANGLLSP KGVNYEVQAL MTIKNYLKDP HGVLKNWDQD SVDPCSWTMV TCSQENLVTG LEAPSQNLSG LLSPSIGNLT
101: NLEIVLLQNN NINGRIPAEI GRLTKLRTLD LSSNHFSGEI PGSVSRLRDL QYLRLNNNTL SGAFPSSSAN LSHLVFLDLS YNNLSGPVPG SLARTFNIVG
201: NPLICGAATE QDCYGTLPMP MSYSLNNTQG TVLPAKSKSH KAAIAFGSTI GCISILFLLT GLLFWWRHRK NRQILFDVDD QHIENVNLEN LKRFQFRELQ
301: AATENFSSKN MIGKGGFGNV YRGKLPDGTI VAVKRLKDGN AAGGELQFQT EVEMISLAVH RNLLRLCGFC MTATERLLIY PYMSNGSVAS RLKGKPPLNW
401: ITRKGIALGA ARGLLYLHEQ CDPKIIHRDV KAANVLLDDF CEAIVGDFGL AKLLDHRDSH VTTAVRGTVG HIAPEYLSTG QSSEKTDVFG FGILLLELIT
501: GQTALEFGKS SNQKGAMLDW VKKMHQEKKL DVLVDKGLGS SYDHIELEEM VQVALLCTQY LPGHRPKMSE VVRMLEGDGL AERWEASQRT DSHKFKVPDF
601: TFGRCYSDLT DDSSLLVQAV ELSGPR

Best Arabidopsis Sequence Match ( AT5G16000.1 )
(BLAST)

001: MESTIVMMMM ITRSFFCFLG FLCLLCSSVH GLLSPKGVNF EVQALMDIKA SLHDPHGVLD NWDRDAVDPC SWTMVTCSSE NFVIGLGTPS QNLSGTLSPS
101: ITNLTNLRIV LLQNNNIKGK IPAEIGRLTR LETLDLSDNF FHGEIPFSVG YLQSLQYLRL NNNSLSGVFP LSLSNMTQLA FLDLSYNNLS GPVPRFAAKT
201: FSIVGNPLIC PTGTEPDCNG TTLIPMSMNL NQTGVPLYAG GSRNHKMAIA VGSSVGTVSL IFIAVGLFLW WRQRHNQNTF FDVKDGNHHE EVSLGNLRRF
301: GFRELQIATN NFSSKNLLGK GGYGNVYKGI LGDSTVVAVK RLKDGGALGG EIQFQTEVEM ISLAVHRNLL RLYGFCITQT EKLLVYPYMS NGSVASRMKA
401: KPVLDWSIRK RIAIGAARGL VYLHEQCDPK IIHRDVKAAN ILLDDYCEAV VGDFGLAKLL DHQDSHVTTA VRGTVGHIAP EYLSTGQSSE KTDVFGFGIL
501: LLELVTGQRA FEFGKAANQK GVMLDWVKKI HQEKKLELLV DKELLKKKSY DEIELDEMVR VALLCTQYLP GHRPKMSEVV RMLEGDGLAE KWEASQRSDS
601: VSKCSNRINE LMSSSDRYSD LTDDSSLLVQ AMELSGPR

Arabidopsis Description

NIK1Protein NSP-INTERACTING KINASE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.