CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

nucleus 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 4
golgi 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra006335.1-P	Field mustard	plasma membrane	93.91	100.0
CDX70667	Canola	endoplasmic reticulum, golgi	97.79	98.19
CDX69484	Canola	plasma membrane	78.98	90.06
CDY26481	Canola	plasma membrane	78.98	89.64
AT5G16000.1	Thale cress	plasma membrane	78.15	88.56
VIT_14s0083g00620.t01	Wine grape	plasma membrane	66.11	76.85
KRH45170	Soybean	plasma membrane	65.7	76.24
KRH01456	Soybean	plasma membrane	65.28	75.76
KRG93765	Soybean	plasma membrane	63.9	74.04
KRH18305	Soybean	plasma membrane	63.49	73.56
Solyc02g089550.2.1	Tomato	plasma membrane	63.49	73.32
Zm00001d018347_P001	Maize	cytosol	7.88	71.25
TraesCS6D01G269400.1	Wheat	plasma membrane	60.03	69.33
TraesCS6A01G289500.1	Wheat	plasma membrane	59.75	69.23
TraesCS6B01G319700.1	Wheat	plasma membrane	59.75	69.12
GSMUA_Achr3P28140_001	Banana	plasma membrane	58.78	69.11
PGSC0003DMT400026062	Potato	plasma membrane	63.21	68.83
EER88222	Sorghum	plasma membrane	58.92	67.73
EES05592	Sorghum	plasma membrane	58.37	67.41
TraesCS7D01G212800.1	Wheat	plasma membrane	57.81	66.88
TraesCS7A01G211100.1	Wheat	plasma membrane	57.81	66.88
TraesCS7B01G118100.1	Wheat	plasma membrane	57.68	66.72
Zm00001d017913_P001	Maize	plasma membrane	57.95	66.72
CDX83534	Canola	plasma membrane	58.64	66.25
GSMUA_Achr9P19160_001	Banana	plasma membrane	56.98	66.13
HORVU7Hr1G043030.2	Barley	plasma membrane	57.12	66.08
CDY48073	Canola	plasma membrane	58.23	65.78
CDY28194	Canola	cytosol	27.94	65.58
Zm00001d037297_P002	Maize	plasma membrane	58.37	64.13
GSMUA_Achr9P14620_001	Banana	plasma membrane	61.13	63.05
Os06t0274500-01	Rice	extracellular	55.46	62.66
HORVU6Hr1G072620.29	Barley	plasma membrane	59.61	62.46
GSMUA_Achr3P06260_001	Banana	plasma membrane	59.06	62.15
GSMUA_Achr1P16110_001	Banana	plasma membrane	57.68	61.96
GSMUA_Achr1P09620_001	Banana	plasma membrane	59.47	61.34
CDX72249	Canola	plasma membrane	52.14	59.18
CDY61508	Canola	cytosol	41.49	59.17
CDY65182	Canola	plasma membrane	52.01	59.03
CDY44608	Canola	cytosol	41.36	58.97
CDY39685	Canola	plasma membrane	51.87	58.87
GSMUA_Achr7P06010_001	Banana	plasma membrane	58.09	58.09
CDY46185	Canola	golgi, plasma membrane	51.04	58.02
CDY61461	Canola	golgi, plasma membrane	50.76	57.8
Zm00001d045728_P003	Maize	plasma membrane	57.81	57.42
CDY39211	Canola	plasma membrane	45.37	56.65
Os02t0728500-01	Rice	extracellular, plasma membrane	24.76	55.25
CDX68670	Canola	plasma membrane	44.81	54.0
CDY00320	Canola	endoplasmic reticulum	1.24	52.94
CDY36679	Canola	plasma membrane	44.4	51.69
CDX72833	Canola	plasma membrane	44.67	51.68
CDX96350	Canola	plasma membrane	44.67	51.68
CDX72403	Canola	plasma membrane	42.32	50.75
CDY39449	Canola	plasma membrane	43.15	50.73
CDX77614	Canola	plasma membrane	43.02	50.65
CDY46116	Canola	plasma membrane	42.05	50.41
CDY45042	Canola	plasma membrane	42.46	50.16
CDX75351	Canola	plasma membrane	42.74	50.16
CDX68975	Canola	plasma membrane	42.46	49.92
CDY48450	Canola	plasma membrane	41.91	49.51
CDX89615	Canola	plasma membrane	41.63	49.34
CDX93126	Canola	plasma membrane	41.49	49.18
CDX71165	Canola	plasma membrane	41.22	48.22
CDY40089	Canola	plasma membrane	39.97	47.3
CDX85768	Canola	plasma membrane	39.83	47.14
CDY39690	Canola	cytosol	39.14	46.62
CDY08807	Canola	plasma membrane	39.0	46.38
CDY55159	Canola	extracellular, plasma membrane, vacuole	39.0	46.38
CDX68299	Canola	plasma membrane	44.12	44.99
CDY28301	Canola	plasma membrane	24.34	44.33
CDX84436	Canola	cytosol	35.13	43.87
CDY41531	Canola	cytosol	35.13	43.87
CDY52435	Canola	plasma membrane, vacuole	17.43	35.9
CDX88452	Canola	plasma membrane, vacuole	17.15	35.33
CDY00321	Canola	plasma membrane	26.56	32.88
CDX84346	Canola	plasma membrane	26.28	32.53
CDX84187	Canola	plasma membrane	25.86	31.75
CDY31708	Canola	plasma membrane	25.59	31.52
CDY32113	Canola	plasma membrane	25.59	31.46
CDY40456	Canola	plasma membrane	25.59	30.99
CDX79610	Canola	plasma membrane	25.45	30.98
CDX84610	Canola	plasma membrane	25.17	30.64
CDY16762	Canola	plasma membrane	25.45	30.56
CDX87267	Canola	plasma membrane	25.03	30.12
CDX68667	Canola	cytosol, mitochondrion, nucleus	2.9	26.25
CDY67608	Canola	cytosol, mitochondrion, nucleus	2.9	26.25

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.2	Gene3D:3.30.200.20	Gene3D:3.30.930.10	Gene3D:3.80.10.10	GO:A0A078CPL0
EnsemblPlants:CDX78667	ProteinID:CDX78667	ProteinID:CDX78667.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00130091001
InterPro:IPR000719	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_4
PFAM:PF00069	PFAM:PF08263	PFAM:PF12799	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR27001	PANTHER:PTHR27001:SF220	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF52058
SUPFAM:SSF55681	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI0004EEA573
SEG:seg	:	:	:	:	:

Description

BnaA03g05790D

Coordinates

chrLK031815:+:1741705..1745327

Molecular Weight (calculated)

80033.7 Da

IEP (calculated)

6.894

GRAVY (calculated)

-0.058

Length

723 amino acids

Sequence
(BLAST)

001: MRSSTIVMMM RRSLVYLLGF LYLLTSVNGL LSSNGVNFEV QALMDIKASL HDPHGVLDSW DRDAVDPCSW TMVTCSSENF VIGLGTPSQN LSGTLSPSIT
101: NLTNLRIVLL QNNNITGKIP SEFGRLTRLE TLDLSDNFFL GEVPFSLGYL RSLQYMRLNN NSLSGVIPLS LSNMTQLALL DLSYNNLSAP VPRFAAKTFS
201: IVGNPLICPT GKEPDCNGTT LIPMSMNLND TGAPLYTGRS KNHKMAIAVG ASVGTVSMIF IAVGLFLWWR QRNNQNTFFD VKDGHYHEEV SLGNLRRFGF
301: RELQIATNNF SSKNLLGKGG YGNVYKGILG DNTVVAVKRL KDGNALGGEI QFQTEVEMIS LAVHRNLLRL YGFCITQAEK LLVYPYMSNG SVASRMKAKP
401: VLDWSIRKKI AIGAARGLVY LHEQCDPKII HRDVKAANIL LDDYCEAVVG DFGLAKLLDH QDSHVTTAVR GTVGHIAPEY LSTGQSSEKT DVFGFGILLL
501: ELVTGQRALE FGKAANQKGA MLEWVKKIHQ EKNLEVLVDK QLLKNKSYDE IELEEMVRVA LLCTQYLPGH RPKMSEVVRM LEGDGLAERW EASQRSDSGS
601: KYSNRIFEIS DVTLLDETKD LGASNRRHLA ALYCGATSGF ELVHGLVDRI MEVMGVPFLP NGDKTGYHIN RSEEPEFLPV GQASIIYKGK HIGNFGIVHP
701: QVLNNFDITD PCSFVEIDIE AFL

Best Arabidopsis Sequence Match ( AT5G16000.1 )
(BLAST)

001: MESTIVMMMM ITRSFFCFLG FLCLLCSSVH GLLSPKGVNF EVQALMDIKA SLHDPHGVLD NWDRDAVDPC SWTMVTCSSE NFVIGLGTPS QNLSGTLSPS
101: ITNLTNLRIV LLQNNNIKGK IPAEIGRLTR LETLDLSDNF FHGEIPFSVG YLQSLQYLRL NNNSLSGVFP LSLSNMTQLA FLDLSYNNLS GPVPRFAAKT
201: FSIVGNPLIC PTGTEPDCNG TTLIPMSMNL NQTGVPLYAG GSRNHKMAIA VGSSVGTVSL IFIAVGLFLW WRQRHNQNTF FDVKDGNHHE EVSLGNLRRF
301: GFRELQIATN NFSSKNLLGK GGYGNVYKGI LGDSTVVAVK RLKDGGALGG EIQFQTEVEM ISLAVHRNLL RLYGFCITQT EKLLVYPYMS NGSVASRMKA
401: KPVLDWSIRK RIAIGAARGL VYLHEQCDPK IIHRDVKAAN ILLDDYCEAV VGDFGLAKLL DHQDSHVTTA VRGTVGHIAP EYLSTGQSSE KTDVFGFGIL
501: LLELVTGQRA FEFGKAANQK GVMLDWVKKI HQEKKLELLV DKELLKKKSY DEIELDEMVR VALLCTQYLP GHRPKMSEVV RMLEGDGLAE KWEASQRSDS
601: VSKCSNRINE LMSSSDRYSD LTDDSSLLVQ AMELSGPR

Arabidopsis Description

NIK1Protein NSP-INTERACTING KINASE 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFS4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.