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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 5
  • plasma membrane 6
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra024369.1-P Field mustard plasma membrane 91.28 98.75
CDY55159 Canola extracellular, plasma membrane, vacuole 98.68 98.68
VIT_00s0646g00030.t01 Wine grape cytosol 50.0 87.11
AT5G65240.2 Thale cress plasma membrane 91.28 86.72
CDX85768 Canola plasma membrane 83.22 82.82
CDY40089 Canola plasma membrane 83.06 82.65
VIT_00s0634g00030.t01 Wine grape cytosol 31.74 82.13
VIT_00s0641g00010.t01 Wine grape cytosol 48.19 80.72
KRH43169 Soybean plasma membrane 75.49 75.25
KRH59316 Soybean plasma membrane 75.33 75.08
Solyc11g008960.1.1 Tomato plasma membrane 73.85 74.34
PGSC0003DMT400041690 Potato plasma membrane 73.68 74.17
PGSC0003DMT400056093 Potato plasma membrane 71.22 71.69
Solyc03g078520.2.1 Tomato plasma membrane 71.55 71.66
OQU91137 Sorghum plasma membrane 55.92 71.43
GSMUA_Achr8P23480_001 Banana plasma membrane 70.23 70.81
TraesCS3D01G299800.1 Wheat plasma membrane 68.91 69.26
TraesCS3B01G334400.2 Wheat plasma membrane 68.75 69.21
Os02t0283800-01 Rice plasma membrane 68.75 68.86
KRG97568 Soybean plasma membrane 68.26 68.48
VIT_00s0848g00010.t01 Wine grape plasma membrane, plastid 22.86 66.83
Zm00001d015971_P004 Maize plasma membrane 67.43 66.34
KRH31305 Soybean plasma membrane 68.91 66.19
EES04934 Sorghum plasma membrane 66.45 64.85
TraesCS3A01G302200.1 Wheat plastid 65.3 61.08
Zm00001d033652_P002 Maize plasma membrane 68.42 61.0
HORVU3Hr1G073960.5 Barley plastid 68.59 57.2
CDY41531 Canola cytosol 53.95 56.65
CDX84436 Canola cytosol 53.29 55.96
CDY28194 Canola cytosol 27.8 54.87
CDX72403 Canola plasma membrane 51.64 52.07
CDY46116 Canola plasma membrane 51.48 51.91
CDY36679 Canola plasma membrane 52.63 51.53
CDX96350 Canola plasma membrane 52.63 51.2
CDX72833 Canola plasma membrane 52.47 51.04
CDX75351 Canola plasma membrane 51.64 50.97
CDX68975 Canola plasma membrane 51.48 50.89
CDX93126 Canola plasma membrane 50.99 50.82
CDY45042 Canola plasma membrane 51.15 50.82
CDX89615 Canola plasma membrane 50.82 50.66
GSMUA_Achr2P22230_001 Banana plasma membrane 59.38 49.86
CDY48450 Canola plasma membrane 49.67 49.35
CDX71165 Canola plasma membrane 48.52 47.73
CDY39690 Canola cytosol 47.2 47.28
CDY00320 Canola endoplasmic reticulum 1.32 47.06
CDY48073 Canola plasma membrane 48.85 46.41
CDY61508 Canola cytosol 38.65 46.35
CDY44608 Canola cytosol 38.65 46.35
CDX83534 Canola plasma membrane 48.68 46.25
CDX69484 Canola plasma membrane 48.03 46.06
CDY26481 Canola plasma membrane 47.7 45.53
CDY39449 Canola plasma membrane 45.39 44.88
CDX77614 Canola plasma membrane 45.23 44.79
CDY46185 Canola golgi, plasma membrane 46.71 44.65
CDY61461 Canola golgi, plasma membrane 46.55 44.57
CDX68299 Canola plasma membrane 51.81 44.43
CDX72249 Canola plasma membrane 45.72 43.64
CDY39685 Canola plasma membrane 44.9 42.86
CDY65182 Canola plasma membrane 44.9 42.86
CDX68670 Canola plasma membrane 41.94 42.5
CDY39211 Canola plasma membrane 40.3 42.31
CDY28301 Canola plasma membrane 26.32 40.3
CDX70667 Canola endoplasmic reticulum, golgi 46.71 39.44
CDX78667 Canola golgi, plasma membrane 46.38 39.0
CDX84346 Canola plasma membrane 32.89 34.25
CDY00321 Canola plasma membrane 32.57 33.9
CDY52435 Canola plasma membrane, vacuole 19.57 33.9
CDX88452 Canola plasma membrane, vacuole 19.41 33.62
CDY32113 Canola plasma membrane 32.24 33.33
CDY40456 Canola plasma membrane 32.4 33.0
CDX79610 Canola plasma membrane 32.24 33.0
CDX84610 Canola plasma membrane 32.24 33.0
CDX87267 Canola plasma membrane 32.57 32.95
CDY16762 Canola plasma membrane 32.57 32.89
CDX84187 Canola plasma membrane 31.09 32.09
CDY31708 Canola plasma membrane 30.92 32.03
CDY67608 Canola cytosol, mitochondrion, nucleus 3.12 23.75
CDX68667 Canola cytosol, mitochondrion, nucleus 3.12 23.75
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078F6U6UniProt:A0A078F6U6
EnsemblPlants:CDY08807ProteinID:CDY08807ProteinID:CDY08807.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016310GO:GO:0016740GO:GO:0019538EnsemblPlantsGene:GSBRNA2T00000765001InterPro:IPR000719
InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfPFAM:PF00069PFAM:PF08263
ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF33InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSSMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0004EEDF02SEG:seg:::
Description
BnaA06g24170DBnaA06g24170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F6U6]
Coordinates
chrLK031989:+:600767..606499
Molecular Weight (calculated)
67747.0 Da
IEP (calculated)
4.840
GRAVY (calculated)
-0.188
Length
608 amino acids
Sequence
(BLAST)
001: MALPFTLTAL VLACLCSSVS TDDQGEALFA LRSSLRASPQ QLSDWNLNQV DPCTWSQVIC DEQKHVTSLT LSYMNFSSGT LSSGIGILKT LKTLTLKGNG
101: ITGEIPESIG NLSSLTSLDL EDNQLSGPIP STLGNLSNIQ FLTLSRNNLN GTVPDSLTGL SKLINILLDS NNLSGEIPQS LFDIPKYNFT ANNLTCGGIY
201: PHPCVTVSNP SGDSSNSKTG IIAGVVSGST VILLGFFLFF FCKDKHKGYR REVFVDVAGE VDRRIAFGQL RRFSWRELQL ATDEFSESNV LGQGGFGKVY
301: KGVLLDGTKV AVKRLTDFER PGGDEAFQRE VEMISVAVHR NLLRLIGFCT TQTERLLVYP FMQNLSVAYR LREIKRGEPV LDWFRRKQIA LGAARGLEYL
401: HEHCNPKIIH RDVKAANVLL DEDFEAVVGD FGLAKLVDVR RTNVTTQVRG TMGHIAPECI STGKSSEKTD VFGYGIMLLE LVTGQRAIDF SRLEEEDDVL
501: LLDHVKKLER EKRLGDIVDK KLEEDYIEEE VEMMIQVALL CTQAAPEERP AMSEVVRMLE GEGLAERWEE WQNLEVTRQE EFQRLQRRFD WGEDSINNQD
601: AIELSGGR
Best Arabidopsis Sequence Match ( AT5G65240.1 )
(BLAST)
001: MALLIITALV FSSLWSSVSP DAQGDALFAL RSSLRASPEQ LSDWNQNQVD PCTWSQVICD DKKHVTSVTL SYMNFSSGTL SSGIGILTTL KTLTLKGNGI
101: MGGIPESIGN LSSLTSLDLE DNHLTDRIPS TLGNLKNLQF LTLSRNNLNG SIPDSLTGLS KLINILLDSN NLSGEIPQSL FKIPKYNFTA NNLSCGGTFP
201: QPCVTESSPS GDSSSRKTGI IAGVVSGIAV ILLGFFFFFF CKDKHKGYKR DVFVDVAGEV DRRIAFGQLR RFAWRELQLA TDEFSEKNVL GQGGFGKVYK
301: GLLSDGTKVA VKRLTDFERP GGDEAFQREV EMISVAVHRN LLRLIGFCTT QTERLLVYPF MQNLSVAYCL REIKPGDPVL DWFRRKQIAL GAARGLEYLH
401: EHCNPKIIHR DVKAANVLLD EDFEAVVGDF GLAKLVDVRR TNVTTQVRGT MGHIAPECIS TGKSSEKTDV FGYGIMLLEL VTGQRAIDFS RLEEEDDVLL
501: LDHVKKLERE KRLEDIVDKK LDEDYIKEEV EMMIQVALLC TQAAPEERPA MSEVVRMLEG EGLAERWEEW QNLEVTRQEE FQRLQRRFDW GEDSINNQDA
601: IELSGGR
Arabidopsis Description
Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:F4KGL1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.