Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 7
  • golgi 5
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:plasma membrane
PPI

Inferred distinct locusB in Crop

locusBlocations
CDX69430
CDX70708
CDX72702
CDX85492
CDX90332
CDY07991
CDY12143
CDY16992
CDY38092
CDY38095
CDY41977
CDY53185
CDY66903
CDY66904

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G13790.1 CDX72702 AT4G39400.1 17600708
AT2G13790.1 CDX90332 AT4G39400.1 17600708
AT2G13790.1 CDY12143 AT4G39400.1 17600708
AT2G13790.1 CDY41977 AT4G39400.1 17600708
AT2G13790.1 CDY53185 AT4G39400.1 17600708
AT2G13790.1 CDY66903 AT4G39400.1 17600708
AT2G13790.1 CDY66904 AT4G39400.1 17600708
AT2G13790.1 CDX69430 AT5G48380.1 19616764
AT2G13790.1 CDX70708 AT5G48380.1 19616764
AT2G13790.1 CDX85492 AT5G48380.1 19616764
AT2G13790.1 CDY07991 AT5G48380.1 19616764
AT2G13790.1 CDY16992 AT5G48380.1 19616764
AT2G13790.1 CDY38092 AT5G48380.1 19616764
AT2G13790.1 CDY38095 AT5G48380.1 19616764
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX93126 Canola plasma membrane 98.85 98.85
Bra013136.1-P Field mustard plasma membrane 79.34 83.74
AT2G13790.1 Thale cress plasma membrane 82.79 81.45
CDY48450 Canola plasma membrane 80.98 80.72
AT2G13800.3 Thale cress plasma membrane 76.89 78.04
CDX75351 Canola plasma membrane 78.52 77.76
CDX68975 Canola plasma membrane 78.36 77.72
CDY45042 Canola plasma membrane 77.87 77.61
CDY46116 Canola plasma membrane 76.72 77.61
CDX72403 Canola plasma membrane 76.72 77.61
CDX71165 Canola plasma membrane 78.36 77.35
PGSC0003DMT400032797 Potato cytosol, plasma membrane, plastid 64.75 76.25
PGSC0003DMT400045607 Potato cytosol, plasma membrane, plastid 65.25 75.81
Solyc10g047140.1.1 Tomato plasma membrane 74.75 74.15
CDY28301 Canola plasma membrane 47.87 73.55
Solyc01g104970.2.1 Tomato plasma membrane 74.26 73.54
VIT_12s0055g01280.t01 Wine grape plasma membrane 61.31 72.9
CDY39690 Canola cytosol 72.46 72.82
VIT_12s0055g01160.t01 Wine grape plasma membrane 72.46 72.46
CDY36679 Canola plasma membrane 72.62 71.34
KRH58311 Soybean plasma membrane 72.13 70.85
GSMUA_Achr7P17210_001 Banana cytosol 57.21 70.79
CDX96350 Canola plasma membrane 72.3 70.56
CDX72833 Canola plasma membrane 72.3 70.56
TraesCS6D01G186900.2 Wheat plasma membrane 69.02 69.7
GSMUA_Achr10P... Banana plasma membrane 71.48 69.65
Os08t0174700-01 Rice plasma membrane 70.98 69.39
TraesCS6A01G203600.2 Wheat cytosol 69.18 69.29
TraesCS7D01G291200.3 Wheat plasma membrane 70.16 68.92
TraesCS7A01G293300.3 Wheat plasma membrane 70.0 68.65
EES07030 Sorghum plasma membrane 70.33 68.53
GSMUA_Achr2P14850_001 Banana plastid 70.16 68.48
Zm00001d016928_P010 Maize plasma membrane 70.16 68.37
Os04t0457800-01 Rice plasma membrane 70.33 68.31
KXG24562 Sorghum plasma membrane 70.66 68.3
GSMUA_AchrUn_... Banana plasma membrane 70.49 68.25
TraesCS7B01G182300.1 Wheat plasma membrane 69.51 68.17
HORVU6Hr1G049080.7 Barley plasma membrane 70.0 67.99
Zm00001d050868_P004 Maize plasma membrane 69.34 67.9
TraesCS6B01G223700.3 Wheat plasma membrane 69.84 67.83
Zm00001d024430_P002 Maize plasma membrane 70.82 67.71
EES12285 Sorghum plasma membrane 68.85 67.52
TraesCS2A01G343100.1 Wheat mitochondrion, plasma membrane 69.34 67.46
Zm00001d025580_P001 Maize plasma membrane 68.69 67.36
TraesCS2D01G321400.1 Wheat mitochondrion 69.18 67.3
TraesCS2B01G340700.1 Wheat plasma membrane 69.18 67.3
GSMUA_Achr7P11620_001 Banana plasma membrane 70.82 67.19
HORVU7Hr1G068990.2 Barley mitochondrion 70.16 63.5
KRH42193 Soybean plasma membrane 64.1 63.47
KRH58312 Soybean plasma membrane 63.44 62.93
Zm00001d049480_P005 Maize plasma membrane 66.72 61.76
GSMUA_Achr10P... Banana mitochondrion 71.48 60.14
CDX68299 Canola plasma membrane 69.34 59.66
HORVU2Hr1G080020.6 Barley cytosol 69.18 59.6
CDY28194 Canola cytosol 28.69 56.82
Os06t0225300-01 Rice plasma membrane 54.1 53.57
CDY08807 Canola plasma membrane 50.66 50.82
CDY55159 Canola extracellular, plasma membrane, vacuole 50.66 50.82
CDX85768 Canola plasma membrane 50.49 50.41
CDY40089 Canola plasma membrane 50.33 50.25
CDY61508 Canola cytosol 41.31 49.7
CDY44608 Canola cytosol 41.15 49.51
CDX69484 Canola plasma membrane 50.16 48.27
CDY26481 Canola plasma membrane 49.84 47.72
CDY61461 Canola golgi, plasma membrane 49.67 47.72
CDY46185 Canola golgi, plasma membrane 49.67 47.64
CDY48073 Canola plasma membrane 48.69 46.41
CDX83534 Canola plasma membrane 48.69 46.41
CDY41531 Canola cytosol 43.11 45.42
CDX84436 Canola cytosol 43.11 45.42
CDY39685 Canola plasma membrane 47.21 45.21
CDX72249 Canola plasma membrane 47.05 45.05
CDY65182 Canola plasma membrane 46.72 44.74
CDY39449 Canola plasma membrane 44.75 44.39
CDX77614 Canola plasma membrane 44.59 44.3
CDY39211 Canola plasma membrane 40.82 43.01
CDX70667 Canola endoplasmic reticulum, golgi 49.84 42.22
CDX78667 Canola golgi, plasma membrane 49.34 41.63
CDX68670 Canola plasma membrane 40.66 41.33
CDY00320 Canola endoplasmic reticulum 0.98 35.29
CDX88452 Canola plasma membrane, vacuole 19.67 34.19
CDX84346 Canola plasma membrane 32.46 33.9
CDY52435 Canola plasma membrane, vacuole 19.34 33.62
CDY00321 Canola plasma membrane 32.13 33.56
CDX84610 Canola plasma membrane 32.46 33.33
CDX79610 Canola plasma membrane 32.46 33.33
CDY31708 Canola plasma membrane 31.48 32.71
CDX84187 Canola plasma membrane 31.48 32.6
CDY32113 Canola plasma membrane 31.31 32.48
CDY16762 Canola plasma membrane 31.8 32.23
CDY40456 Canola plasma membrane 31.48 32.16
CDX87267 Canola plasma membrane 31.48 31.95
CDX68667 Canola cytosol, mitochondrion, nucleus 1.97 15.0
CDY67608 Canola cytosol, mitochondrion, nucleus 1.97 15.0
Protein Annotations
KEGG:04150+2.7.11.1KEGG:04151+2.7.11.1KEGG:04714+2.7.11.1KEGG:04926+2.7.11.1KEGG:05165+2.7.11.1Gene3D:1.10.510.10
MapMan:11.3.2.1.2MapMan:18.4.1.2Gene3D:3.30.200.20Gene3D:3.80.10.10GO:A0A078DKC6EnsemblPlants:CDX89615
ProteinID:CDX89615ProteinID:CDX89615.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672
GO:GO:0004871GO:GO:0005102GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0006464
GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016301GO:GO:0016740GO:GO:0019199GO:GO:0019538GO:GO:0038023EnsemblPlantsGene:GSBRNA2T00149975001
InterPro:IPR000719InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfPFAM:PF00069
PFAM:PF08263ScanProsite:PS00107ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR27001PANTHER:PTHR27001:SF1
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSInterPro:SERKSMART:SM00220SUPFAM:SSF52058SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0004EDE19FSEG:seg:
Description
BnaC03g45290D
Coordinates
chrLK031860:-:138645..141878
Molecular Weight (calculated)
68107.4 Da
IEP (calculated)
5.021
GRAVY (calculated)
-0.245
Length
610 amino acids
Sequence
(BLAST)
001: MEWPRSFIWL ILLSDLLLRA VGNSEGEALT AFKDSLSDPT NALQSWDNQN SVSPCTWFHV TCNPENRVVR VDLGNAKLSG QLVPQLGQLP NLQYLELYSN
101: NITGEIPKEL GDLRELVSLD LYQNRLSGPI PSSLGKLDKL RFLRLNNNNL SGEIPLSLTA VSLQVLDVAN NQLNGDIPVN GSFSFFTPIS FANNNLRQHP
201: PSPPPPISTP PPSPPVSRSR MTAAVAGGVA AGAAVLFACP AIAFAWWIRS RSQDRFFDVP AEENPEVHFG QLRRFSLREL LVATDNFSHK NVLGRGGFGK
301: VYKGRLADGS LVAVKRLKEE RTQGGELQFQ TEVEMISMAV HRNLLRLRGF CMTPTERLLV YPYMANGSVA SCLRERLEGN PALDWPKRKH IALGAARGLA
401: YLHDQCEQKI IHRDVKAANI LLDEEFEAVV GDFGLAKLMN YNDSHVTTAV RGTIGHIAPE YLSTGKSSEK TDVFGYGVML LELITGQKAF DLARLANDDD
501: IMLLDWVKEV LKEKKFESLV DEELEGKYEE KEVEQLIQMA LLCTQISSLE RPKMSEVVRM LEGEGLAEKW EEWQNEEILT NDSNYLQVGT EWFIPISNSL
601: IENDYPSGPR
Best Arabidopsis Sequence Match ( AT2G13790.1 )
(BLAST)
001: MTSSKMEQRS LLCFLYLLLL FNFTLRVAGN AEGDALTQLK NSLSSGDPAN NVLQSWDATL VTPCTWFHVT CNPENKVTRV DLGNAKLSGK LVPELGQLLN
101: LQYLELYSNN ITGEIPEELG DLVELVSLDL YANSISGPIP SSLGKLGKLR FLRLNNNSLS GEIPMTLTSV QLQVLDISNN RLSGDIPVNG SFSLFTPISF
201: ANNSLTDLPE PPPTSTSPTP PPPSGGQMTA AIAGGVAAGA ALLFAVPAIA FAWWLRRKPQ DHFFDVPAEE DPEVHLGQLK RFTLRELLVA TDNFSNKNVL
301: GRGGFGKVYK GRLADGNLVA VKRLKEERTK GGELQFQTEV EMISMAVHRN LLRLRGFCMT PTERLLVYPY MANGSVASCL RERPEGNPAL DWPKRKHIAL
401: GSARGLAYLH DHCDQKIIHR DVKAANILLD EEFEAVVGDF GLAKLMNYND SHVTTAVRGT IGHIAPEYLS TGKSSEKTDV FGYGVMLLEL ITGQKAFDLA
501: RLANDDDIML LDWVKEVLKE KKLESLVDAE LEGKYVETEV EQLIQMALLC TQSSAMERPK MSEVVRMLEG DGLAERWEEW QKEEMPIHDF NYQAYPHAGT
601: DWLIPYSNSL IENDYPSGPR
Arabidopsis Description
SERK4Somatic embryogenesis receptor kinase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SKG5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.